RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 TNPO2O14787 897 aaKnown RBP19.99■□□□□ 0.79
PDLIM7-213ENST00000505074 HHIPL2Q6UWX4 724 aa19.99■□□□□ 0.79
PDLIM7-213ENST00000505074 Q7L0L9 218 aa19.99■□□□□ 0.79
PDLIM7-213ENST00000505074 FASTKD5Q7L8L6 764 aaKnown RBP19.99■□□□□ 0.79
PDLIM7-213ENST00000505074 C7orf61Q8IZ16 206 aa19.99■□□□□ 0.79
PDLIM7-213ENST00000505074 USP44Q9H0E7 712 aa19.99■□□□□ 0.79
PDLIM7-213ENST00000505074 DOCK3Q8IZD9 2030 aa19.98■□□□□ 0.79
PDLIM7-213ENST00000505074 PDE8BO95263 885 aa19.98■□□□□ 0.79
PDLIM7-213ENST00000505074 BCAMP50895 628 aa19.98■□□□□ 0.79
PDLIM7-213ENST00000505074 LRIT3Q3SXY7 679 aa19.98■□□□□ 0.79
PDLIM7-213ENST00000505074 LAMA3Q16787 3333 aa19.98■□□□□ 0.79
PDLIM7-213ENST00000505074 IFIT1P09914 478 aaKnown RBP19.97■□□□□ 0.79
PDLIM7-213ENST00000505074 ANKLE1Q8NAG6 615 aa19.97■□□□□ 0.79
PDLIM7-213ENST00000505074 MTMR10Q9NXD2 777 aa19.97■□□□□ 0.79
PDLIM7-213ENST00000505074 TAOK2Q9UL54 1235 aa19.97■□□□□ 0.79
PDLIM7-213ENST00000505074 ZMYND8Q9ULU4 1186 aaPredicted RBP19.97■□□□□ 0.79
PDLIM7-213ENST00000505074 UBTFL1P0CB47 393 aaPredicted RBP19.96■□□□□ 0.79
PDLIM7-213ENST00000505074 TCP10Q12799 353 aa19.96■□□□□ 0.79
PDLIM7-213ENST00000505074 PUM3Q15397 648 aaKnown RBP19.96■□□□□ 0.79
PDLIM7-213ENST00000505074 DIS3LQ8TF46 1054 aaKnown RBP19.96■□□□□ 0.79
PDLIM7-213ENST00000505074 COL25A1Q9BXS0 654 aaPredicted RBP19.96■□□□□ 0.79
PDLIM7-213ENST00000505074 PTPRFP10586 1907 aa19.96■□□□□ 0.79
PDLIM7-213ENST00000505074 GADL1Q6ZQY3 521 aa19.95■□□□□ 0.78
PDLIM7-213ENST00000505074 TDHQ8IZJ6 230 aa19.95■□□□□ 0.78
PDLIM7-213ENST00000505074 VGLL2Q8N8G2 317 aa19.95■□□□□ 0.78
PDLIM7-213ENST00000505074 COA7Q96BR5 231 aa19.95■□□□□ 0.78
PDLIM7-213ENST00000505074 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.95■□□□□ 0.788e-9■■■■□ 19.6
PDLIM7-213ENST00000505074 NOB1Q9ULX3 412 aaKnown RBP19.95■□□□□ 0.78
PDLIM7-213ENST00000505074 SLC45A1Q9Y2W3 748 aa19.95■□□□□ 0.78
PDLIM7-213ENST00000505074 DOCK2Q92608 1830 aa19.95■□□□□ 0.78
PDLIM7-213ENST00000505074 A0A0G2JLL6 359 aaPredicted RBP19.94■□□□□ 0.78
PDLIM7-213ENST00000505074 SLC5A1P13866 664 aa19.94■□□□□ 0.78
PDLIM7-213ENST00000505074 PRRT2Q7Z6L0 340 aaPredicted RBP19.94■□□□□ 0.78
PDLIM7-213ENST00000505074 SMCR8Q8TEV9 937 aaPredicted RBP19.94■□□□□ 0.78
PDLIM7-213ENST00000505074 SIL1Q9H173 461 aa19.94■□□□□ 0.78
PDLIM7-213ENST00000505074 EYA2O00167 538 aa19.93■□□□□ 0.78
PDLIM7-213ENST00000505074 CT47B1P0C2W7 299 aaPredicted RBP19.93■□□□□ 0.78
PDLIM7-213ENST00000505074 API5Q9BZZ5 524 aaKnown RBP19.93■□□□□ 0.78
PDLIM7-213ENST00000505074 NBPF3Q9H094 633 aa19.93■□□□□ 0.78
PDLIM7-213ENST00000505074 PICK1Q9NRD5 415 aa19.93■□□□□ 0.78
PDLIM7-213ENST00000505074 ZHX2Q9Y6X8 837 aa19.93■□□□□ 0.78
PDLIM7-213ENST00000505074 DDX60LQ5H9U9 1706 aaKnown RBP19.93■□□□□ 0.78
PDLIM7-213ENST00000505074 SYN1P17600 705 aa19.92■□□□□ 0.78
PDLIM7-213ENST00000505074 MAGEA10P43363 369 aaPredicted RBP19.92■□□□□ 0.78
PDLIM7-213ENST00000505074 CDC42EP5Q6NZY7 148 aa19.92■□□□□ 0.78
PDLIM7-213ENST00000505074 SCYL3Q8IZE3 742 aa19.92■□□□□ 0.78
PDLIM7-213ENST00000505074 CCER2I3L3R5 266 aa19.91■□□□□ 0.78
PDLIM7-213ENST00000505074 NFIAQ12857 509 aa19.91■□□□□ 0.78
PDLIM7-213ENST00000505074 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.91■□□□□ 0.781e-6■□□□□ 9
PDLIM7-213ENST00000505074 TRMT2AQ8IZ69 625 aaKnown RBP19.91■□□□□ 0.78
PDLIM7-213ENST00000505074 WDR66Q8TBY9 1149 aa19.91■□□□□ 0.78
PDLIM7-213ENST00000505074 UBE2OQ9C0C9 1292 aaKnown RBP19.91■□□□□ 0.78
PDLIM7-213ENST00000505074 PHIPQ8WWQ0 1821 aa19.9■□□□□ 0.78
PDLIM7-213ENST00000505074 DOCK1Q14185 1865 aa19.9■□□□□ 0.78
PDLIM7-213ENST00000505074 PTPRAP18433 802 aa19.9■□□□□ 0.78
PDLIM7-213ENST00000505074 RFX5P48382 616 aaPredicted RBP19.9■□□□□ 0.78
PDLIM7-213ENST00000505074 ANKRD13CQ8N6S4 541 aa19.9■□□□□ 0.78
PDLIM7-213ENST00000505074 LPIN2Q92539 896 aa19.9■□□□□ 0.78
PDLIM7-213ENST00000505074 C11orf49Q9H6J7 331 aa19.9■□□□□ 0.78
PDLIM7-213ENST00000505074 DAGLAQ9Y4D2 1042 aa19.9■□□□□ 0.78
PDLIM7-213ENST00000505074 AFG3L2Q9Y4W6 797 aa19.9■□□□□ 0.78
PDLIM7-213ENST00000505074 LRRFIP2Q9Y608 721 aaKnown RBP19.9■□□□□ 0.78
PDLIM7-213ENST00000505074 KIF16BQ96L93 1317 aa19.9■□□□□ 0.78
PDLIM7-213ENST00000505074 HMGCRP04035 888 aa19.89■□□□□ 0.77
PDLIM7-213ENST00000505074 FGFR2P21802 821 aa19.89■□□□□ 0.77
PDLIM7-213ENST00000505074 HMX1Q9NP08 348 aaPredicted RBP19.89■□□□□ 0.77
PDLIM7-213ENST00000505074 USP40Q9NVE5 1235 aa19.89■□□□□ 0.77
PDLIM7-213ENST00000505074 FAM198AQ9UFP1 575 aa19.89■□□□□ 0.77
PDLIM7-213ENST00000505074 HDAC5Q9UQL6 1122 aa19.89■□□□□ 0.77
PDLIM7-213ENST00000505074 RPTORQ8N122 1335 aa19.88■□□□□ 0.77
PDLIM7-213ENST00000505074 PHF20L1A8MW92 1017 aa19.88■□□□□ 0.77
PDLIM7-213ENST00000505074 ATP2B3Q16720 1220 aa19.88■□□□□ 0.77
PDLIM7-213ENST00000505074 CEP126Q9P2H0 1117 aa19.88■□□□□ 0.77
PDLIM7-213ENST00000505074 PNMA3Q9UL41 463 aa19.88■□□□□ 0.77
PDLIM7-213ENST00000505074 DIXDC1Q155Q3 683 aa19.87■□□□□ 0.77
PDLIM7-213ENST00000505074 FAM110CQ1W6H9 321 aa19.87■□□□□ 0.77
PDLIM7-213ENST00000505074 ATG9AQ7Z3C6 839 aa19.87■□□□□ 0.77
PDLIM7-213ENST00000505074 AGTPBP1Q9UPW5 1226 aa19.87■□□□□ 0.77
PDLIM7-213ENST00000505074 RARSP54136 660 aaKnown RBP19.86■□□□□ 0.77
PDLIM7-213ENST00000505074 ZFPM1Q8IX07 1006 aa19.86■□□□□ 0.77
PDLIM7-213ENST00000505074 MEIS3Q99687 375 aa19.86■□□□□ 0.77
PDLIM7-213ENST00000505074 GNL3LQ9NVN8 582 aaKnown RBP19.86■□□□□ 0.77
PDLIM7-213ENST00000505074 PA2G4Q9UQ80 394 aaKnown RBP19.86■□□□□ 0.77
PDLIM7-213ENST00000505074 MYH2Q9UKX2 1941 aa19.86■□□□□ 0.77
PDLIM7-213ENST00000505074 ATRNL1Q5VV63 1379 aa19.85■□□□□ 0.77
PDLIM7-213ENST00000505074 UNC80Q8N2C7 3258 aa19.85■□□□□ 0.77
PDLIM7-213ENST00000505074 TRIM75PA6NK02 468 aa19.85■□□□□ 0.77
PDLIM7-213ENST00000505074 CIAO1O76071 339 aa19.85■□□□□ 0.77
PDLIM7-213ENST00000505074 ZSCAN29Q8IWY8 852 aaPredicted RBP19.85■□□□□ 0.77
PDLIM7-213ENST00000505074 FBXO3Q9UK99 471 aa19.85■□□□□ 0.77
PDLIM7-213ENST00000505074 CTNND1O60716 968 aaKnown RBP19.84■□□□□ 0.77
PDLIM7-213ENST00000505074 LDHBP07195 334 aaKnown RBP19.84■□□□□ 0.77
PDLIM7-213ENST00000505074 IL15P40933 162 aaPredicted RBP19.84■□□□□ 0.77
PDLIM7-213ENST00000505074 OGDHLQ9ULD0 1010 aa19.84■□□□□ 0.77
PDLIM7-213ENST00000505074 ENTPD3O75355 529 aa19.83■□□□□ 0.77
PDLIM7-213ENST00000505074 PRDX5P30044 214 aa19.83■□□□□ 0.77
PDLIM7-213ENST00000505074 RGS3P49796 1198 aa19.83■□□□□ 0.77
PDLIM7-213ENST00000505074 FRAT1Q92837 279 aaPredicted RBP19.83■□□□□ 0.77
PDLIM7-213ENST00000505074 PLXNB2O15031 1838 aa19.82■□□□□ 0.76
PDLIM7-213ENST00000505074 GNAI3P08754 354 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms