RNA–Protein interactions for RNA: ENST00000504905.5

HERC6-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-205ENST00000504905 SSC5DA1L4H1 1573 aa24.5■■□□□ 1.51
HERC6-205ENST00000504905 PLCG2P16885 1265 aa24.49■■□□□ 1.51
HERC6-205ENST00000504905 RHBDL3P58872 404 aa24.49■■□□□ 1.51
HERC6-205ENST00000504905 MOB2Q70IA6 237 aa24.49■■□□□ 1.51
HERC6-205ENST00000504905 ADGRA1Q86SQ6 560 aa24.49■■□□□ 1.51
HERC6-205ENST00000504905 RASAL3Q86YV0 1011 aa24.49■■□□□ 1.51
HERC6-205ENST00000504905 FAM151AQ8WW52 585 aa24.49■■□□□ 1.51
HERC6-205ENST00000504905 IDI2Q9BXS1 227 aa24.49■■□□□ 1.51
HERC6-205ENST00000504905 LNPKQ9C0E8 428 aa24.49■■□□□ 1.51
HERC6-205ENST00000504905 AATFQ9NY61 560 aaKnown RBP eCLIP24.49■■□□□ 1.51
HERC6-205ENST00000504905 FAM198AQ9UFP1 575 aa24.49■■□□□ 1.51
HERC6-205ENST00000504905 PPP1R12BO60237 982 aaPredicted RBP24.48■■□□□ 1.51
HERC6-205ENST00000504905 CTU1Q7Z7A3 348 aaKnown RBP24.48■■□□□ 1.51
HERC6-205ENST00000504905 CDAN1Q8IWY9 1227 aa24.48■■□□□ 1.51
HERC6-205ENST00000504905 RPAP1Q9BWH6 1393 aaPredicted RBP24.48■■□□□ 1.51
HERC6-205ENST00000504905 RFX7Q2KHR2 1363 aa24.47■■□□□ 1.51
HERC6-205ENST00000504905 SALL3Q9BXA9 1300 aa24.47■■□□□ 1.51
HERC6-205ENST00000504905 UBE2Q2LH0YL09 131 aa24.47■■□□□ 1.51
HERC6-205ENST00000504905 WDHD1O75717 1129 aaPredicted RBP24.47■■□□□ 1.51
HERC6-205ENST00000504905 GLRX3O76003 335 aaKnown RBP24.47■■□□□ 1.51
HERC6-205ENST00000504905 RGS3P49796 1198 aa24.47■■□□□ 1.51
HERC6-205ENST00000504905 SOX10P56693 466 aa24.47■■□□□ 1.51
HERC6-205ENST00000504905 PICALMQ13492 652 aa24.47■■□□□ 1.51
HERC6-205ENST00000504905 SLC9C2Q5TAH2 1124 aa24.47■■□□□ 1.51
HERC6-205ENST00000504905 CHD1LQ86WJ1 897 aa24.47■■□□□ 1.51
HERC6-205ENST00000504905 TEX11Q8IYF3 940 aa24.47■■□□□ 1.51
HERC6-205ENST00000504905 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.47■■□□□ 1.51
HERC6-205ENST00000504905 ANGEL1Q9UNK9 670 aaKnown RBP24.47■■□□□ 1.51
HERC6-205ENST00000504905 ENTPD3O75355 529 aa24.46■■□□□ 1.51
HERC6-205ENST00000504905 PDE6AP16499 860 aa24.46■■□□□ 1.51
HERC6-205ENST00000504905 PPP4CP60510 307 aa24.46■■□□□ 1.51
HERC6-205ENST00000504905 NUCB1Q02818 461 aa24.46■■□□□ 1.51
HERC6-205ENST00000504905 SH3RF3Q8TEJ3 882 aaPredicted RBP24.46■■□□□ 1.51
HERC6-205ENST00000504905 HOOK2Q96ED9 719 aa24.46■■□□□ 1.51
HERC6-205ENST00000504905 FZD1Q9UP38 647 aa24.46■■□□□ 1.51
HERC6-205ENST00000504905 CDK5RAP2Q96SN8 1893 aa24.46■■□□□ 1.51
HERC6-205ENST00000504905 CERS3Q8IU89 383 aa24.45■■□□□ 1.5
HERC6-205ENST00000504905 PI4K2BQ8TCG2 481 aa24.45■■□□□ 1.5
HERC6-205ENST00000504905 DDX4Q9NQI0 724 aaKnown RBP24.45■■□□□ 1.5
HERC6-205ENST00000504905 PDE4DIPQ5VU43 2346 aa24.44■■□□□ 1.5
HERC6-205ENST00000504905 ZNF532Q9HCE3 1301 aa24.44■■□□□ 1.5
HERC6-205ENST00000504905 ZFPM1Q8IX07 1006 aa24.44■■□□□ 1.5
HERC6-205ENST00000504905 MIGA1Q8NAN2 632 aa24.44■■□□□ 1.5
HERC6-205ENST00000504905 FOCADQ5VW36 1801 aa24.44■■□□□ 1.5
HERC6-205ENST00000504905 NPM3O75607 178 aaKnown RBP24.43■■□□□ 1.5
HERC6-205ENST00000504905 IREB2P48200 963 aaKnown RBP24.43■■□□□ 1.5
HERC6-205ENST00000504905 PDE1AP54750 535 aa24.43■■□□□ 1.5
HERC6-205ENST00000504905 DYNLL1P63167 89 aaKnown RBP24.43■■□□□ 1.5
HERC6-205ENST00000504905 MAP3K11Q16584 847 aa24.43■■□□□ 1.5
HERC6-205ENST00000504905 ZSCAN29Q8IWY8 852 aaPredicted RBP24.43■■□□□ 1.5
HERC6-205ENST00000504905 STAP2Q9UGK3 403 aa24.43■■□□□ 1.5
HERC6-205ENST00000504905 USP2O75604 605 aaPredicted RBP24.42■■□□□ 1.5
HERC6-205ENST00000504905 NEFLP07196 543 aa24.42■■□□□ 1.5
HERC6-205ENST00000504905 ADD2P35612 726 aa24.42■■□□□ 1.5
HERC6-205ENST00000504905 DCAF15Q66K64 600 aa24.42■■□□□ 1.5
HERC6-205ENST00000504905 ZSCAN25Q6NSZ9 544 aa24.42■■□□□ 1.5
HERC6-205ENST00000504905 TCRBV5S4A2TA0A5A2 114 aa24.41■■□□□ 1.5
HERC6-205ENST00000504905 PKN2Q16513 984 aaKnown RBP24.41■■□□□ 1.5
HERC6-205ENST00000504905 LDLRAD1Q5T700 205 aa24.41■■□□□ 1.5
HERC6-205ENST00000504905 KBTBD3Q8NAB2 608 aa24.41■■□□□ 1.5
HERC6-205ENST00000504905 TGFBRAP1Q8WUH2 860 aa24.41■■□□□ 1.5
HERC6-205ENST00000504905 OTOFQ9HC10 1997 aa24.41■■□□□ 1.5
HERC6-205ENST00000504905 MAGEB6P1A0A0J9YX57 407 aa24.4■■□□□ 1.5
HERC6-205ENST00000504905 OSBPL5Q9H0X9 879 aaPredicted RBP24.4■■□□□ 1.5
HERC6-205ENST00000504905 MIGA2Q7L4E1 593 aa24.39■■□□□ 1.49
HERC6-205ENST00000504905 HPS5Q9UPZ3 1129 aa24.39■■□□□ 1.49
HERC6-205ENST00000504905 DDTLA6NHG4 134 aaPredicted RBP24.38■■□□□ 1.49
HERC6-205ENST00000504905 UNCXA6NJT0 531 aa24.38■■□□□ 1.49
HERC6-205ENST00000504905 UBE3CQ15386 1083 aa24.38■■□□□ 1.49
HERC6-205ENST00000504905 SH3BP5LQ7L8J4 393 aa24.38■■□□□ 1.49
HERC6-205ENST00000504905 MAPKAPK5Q8IW41 473 aa24.38■■□□□ 1.49
HERC6-205ENST00000504905 ANKRD13AQ8IZ07 590 aa24.38■■□□□ 1.49
HERC6-205ENST00000504905 RIOK1Q9BRS2 568 aaKnown RBP24.38■■□□□ 1.49
HERC6-205ENST00000504905 ZNF341Q9BYN7 854 aa24.38■■□□□ 1.49
HERC6-205ENST00000504905 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.38■■□□□ 1.49
HERC6-205ENST00000504905 ATRNL1Q5VV63 1379 aa24.38■■□□□ 1.49
HERC6-205ENST00000504905 COL2A1P02458 1487 aaPredicted RBP24.38■■□□□ 1.49
HERC6-205ENST00000504905 FLT1P17948 1338 aa24.37■■□□□ 1.49
HERC6-205ENST00000504905 USP5P45974 858 aa24.37■■□□□ 1.49
HERC6-205ENST00000504905 TM4SF4P48230 202 aa24.37■■□□□ 1.49
HERC6-205ENST00000504905 LRRFIP1Q32MZ4 808 aaKnown RBP24.37■■□□□ 1.49
HERC6-205ENST00000504905 SLFNL1Q499Z3 407 aa24.37■■□□□ 1.49
HERC6-205ENST00000504905 NOM1Q5C9Z4 860 aaKnown RBP24.37■■□□□ 1.49
HERC6-205ENST00000504905 SLC10A4Q96EP9 437 aa24.37■■□□□ 1.49
HERC6-205ENST00000504905 MYH1P12882 1939 aa24.37■■□□□ 1.49
HERC6-205ENST00000504905 MAP3K9P80192 1104 aa24.36■■□□□ 1.49
HERC6-205ENST00000504905 PRPF38BQ5VTL8 546 aaKnown RBP24.36■■□□□ 1.49
HERC6-205ENST00000504905 PLEKHM2Q8IWE5 1019 aa24.36■■□□□ 1.49
HERC6-205ENST00000504905 ZNF296Q8WUU4 475 aaPredicted RBP24.36■■□□□ 1.49
HERC6-205ENST00000504905 CLMNQ96JQ2 1002 aa24.36■■□□□ 1.49
HERC6-205ENST00000504905 WRNIP1Q96S55 665 aa24.36■■□□□ 1.49
HERC6-205ENST00000504905 FSD1Q9BTV5 496 aa24.36■■□□□ 1.49
HERC6-205ENST00000504905 CRNKL1Q9BZJ0 848 aaKnown RBP24.36■■□□□ 1.49
HERC6-205ENST00000504905 RNF113AO15541 343 aaKnown RBP24.35■■□□□ 1.49
HERC6-205ENST00000504905 TBC1D8O95759 1140 aa24.35■■□□□ 1.49
HERC6-205ENST00000504905 CHGBP05060 677 aa24.35■■□□□ 1.49
HERC6-205ENST00000504905 ZFYP08048 801 aaPredicted RBP24.35■■□□□ 1.49
HERC6-205ENST00000504905 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.35■■□□□ 1.49
HERC6-205ENST00000504905 CSADQ9Y600 493 aa24.35■■□□□ 1.49
HERC6-205ENST00000504905 NAV1Q8NEY1 1877 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms