RNA–Protein interactions for RNA: ENST00000504875.5

CSF1R-203, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best)

Gene CSF1R, Length 3,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-203ENST00000504875 RTEL1Q9NZ71 1219 aa11.23□□□□□ -0.61
CSF1R-203ENST00000504875 ANKIB1Q9P2G1 1089 aa11.23□□□□□ -0.61
CSF1R-203ENST00000504875 HPS5Q9UPZ3 1129 aa11.23□□□□□ -0.61
CSF1R-203ENST00000504875 CCDC196A0A1B0GTZ2 297 aa11.23□□□□□ -0.61
CSF1R-203ENST00000504875 KIF28PB7ZC32 967 aa11.23□□□□□ -0.61
CSF1R-203ENST00000504875 CAMTA2O94983 1202 aa11.23□□□□□ -0.61
CSF1R-203ENST00000504875 GNAT2P19087 354 aa11.23□□□□□ -0.61
CSF1R-203ENST00000504875 CNNM3Q8NE01 707 aa11.23□□□□□ -0.61
CSF1R-203ENST00000504875 ESR2Q92731 530 aa11.23□□□□□ -0.61
CSF1R-203ENST00000504875 AGXT2Q9BYV1 514 aa11.23□□□□□ -0.61
CSF1R-203ENST00000504875 ADAMTS7Q9UKP4 1686 aa11.22□□□□□ -0.61
CSF1R-203ENST00000504875 CAVIN2O95810 425 aa11.22□□□□□ -0.61
CSF1R-203ENST00000504875 IQCA1Q86XH1 822 aa11.22□□□□□ -0.61
CSF1R-203ENST00000504875 TICAM2Q86XR7 235 aa11.22□□□□□ -0.61
CSF1R-203ENST00000504875 CLIC6Q96NY7 704 aa11.22□□□□□ -0.61
CSF1R-203ENST00000504875 TRMT1Q9NXH9 659 aaKnown RBP11.22□□□□□ -0.61
CSF1R-203ENST00000504875 SRP68Q9UHB9 627 aaKnown RBP11.22□□□□□ -0.61
CSF1R-203ENST00000504875 SPATA31A1Q5TZJ5 1347 aa11.22□□□□□ -0.61
CSF1R-203ENST00000504875 CYP2D7A0A087X1C5 515 aa11.22□□□□□ -0.61
CSF1R-203ENST00000504875 UBE2Q2LH0YL09 131 aa11.22□□□□□ -0.61
CSF1R-203ENST00000504875 FOXP2O15409 715 aa11.22□□□□□ -0.61
CSF1R-203ENST00000504875 SERPINC1P01008 464 aa11.22□□□□□ -0.61
CSF1R-203ENST00000504875 TNNT3P45378 269 aaPredicted RBP11.22□□□□□ -0.61
CSF1R-203ENST00000504875 DZIP1Q86YF9 867 aaKnown RBP11.22□□□□□ -0.61
CSF1R-203ENST00000504875 VGLL2Q8N8G2 317 aa11.22□□□□□ -0.61
CSF1R-203ENST00000504875 ABCC6O95255 1503 aa11.22□□□□□ -0.61
CSF1R-203ENST00000504875 YEATS4O95619 227 aa11.22□□□□□ -0.61
CSF1R-203ENST00000504875 PFKFB1P16118 471 aa11.22□□□□□ -0.61
CSF1R-203ENST00000504875 LMOD1P29536 600 aaPredicted RBP11.22□□□□□ -0.61
CSF1R-203ENST00000504875 DYNLL1P63167 89 aaKnown RBP11.22□□□□□ -0.61
CSF1R-203ENST00000504875 PPARAQ07869 468 aa11.22□□□□□ -0.61
CSF1R-203ENST00000504875 DIS3L2Q8IYB7 885 aaKnown RBP11.22□□□□□ -0.61
CSF1R-203ENST00000504875 RASSF8Q8NHQ8 419 aa11.22□□□□□ -0.61
CSF1R-203ENST00000504875 EPB41L4AQ9HCS5 686 aaPredicted RBP11.22□□□□□ -0.61
CSF1R-203ENST00000504875 BTBD18B2RXH4 712 aa11.21□□□□□ -0.61
CSF1R-203ENST00000504875 UBAP1LF5GYI3 381 aa11.21□□□□□ -0.61
CSF1R-203ENST00000504875 IFIT1BQ5T764 474 aaKnown RBP11.21□□□□□ -0.61
CSF1R-203ENST00000504875 AATFQ9NY61 560 aaKnown RBP eCLIP11.21□□□□□ -0.61
CSF1R-203ENST00000504875 WTIPA6NIX2 430 aaPredicted RBP11.21□□□□□ -0.61
CSF1R-203ENST00000504875 GSG1L2A8MUP6 293 aa11.21□□□□□ -0.61
CSF1R-203ENST00000504875 TOM1O60784 492 aa11.21□□□□□ -0.61
CSF1R-203ENST00000504875 CATIPQ7Z7H3 387 aa11.21□□□□□ -0.61
CSF1R-203ENST00000504875 NOL10Q9BSC4 688 aaKnown RBP11.21□□□□□ -0.61
CSF1R-203ENST00000504875 ABCC12Q96J65 1359 aa11.21□□□□□ -0.62
CSF1R-203ENST00000504875 TDRD7Q8NHU6 1098 aaKnown RBP11.21□□□□□ -0.62
CSF1R-203ENST00000504875 HOOK1Q9UJC3 728 aaKnown RBP11.21□□□□□ -0.62
CSF1R-203ENST00000504875 CRYBG1Q9Y4K1 1723 aa11.2□□□□□ -0.62
CSF1R-203ENST00000504875 TMC6Q7Z403 805 aa11.2□□□□□ -0.62
CSF1R-203ENST00000504875 MYRIPQ8NFW9 859 aa11.2□□□□□ -0.62
CSF1R-203ENST00000504875 CELF1Q92879 486 aaKnown RBP11.2□□□□□ -0.62
CSF1R-203ENST00000504875 LY9Q9HBG7 655 aa11.2□□□□□ -0.62
CSF1R-203ENST00000504875 BRMS1Q9HCU9 246 aa11.2□□□□□ -0.62
CSF1R-203ENST00000504875 LAMB4A4D0S4 1761 aa11.2□□□□□ -0.62
CSF1R-203ENST00000504875 NTSR2O95665 410 aa11.2□□□□□ -0.62
CSF1R-203ENST00000504875 USP5P45974 858 aa11.2□□□□□ -0.62
CSF1R-203ENST00000504875 DPCR1Q3MIW9 517 aa11.2□□□□□ -0.62
CSF1R-203ENST00000504875 ILDR1Q86SU0 546 aaPredicted RBP11.2□□□□□ -0.62
CSF1R-203ENST00000504875 ZNF654Q8IZM8 581 aa11.2□□□□□ -0.62
CSF1R-203ENST00000504875 KIAA1468Q9P260 1216 aa11.2□□□□□ -0.62
CSF1R-203ENST00000504875 CCNL1Q9UK58 526 aaPredicted RBP11.2□□□□□ -0.62
CSF1R-203ENST00000504875 FGFR2P21802 821 aa11.2□□□□□ -0.62
CSF1R-203ENST00000504875 RFC4P35249 363 aa11.2□□□□□ -0.62
CSF1R-203ENST00000504875 RPS8P62241 208 aaKnown RBP11.2□□□□□ -0.62
CSF1R-203ENST00000504875 CFAP100Q494V2 611 aa11.2□□□□□ -0.62
CSF1R-203ENST00000504875 TAF3Q5VWG9 929 aa11.2□□□□□ -0.62
CSF1R-203ENST00000504875 CCDC34Q96HJ3 373 aa11.2□□□□□ -0.62
CSF1R-203ENST00000504875 AK7Q96M32 723 aa11.2□□□□□ -0.62
CSF1R-203ENST00000504875 CABP5Q9NP86 173 aa11.2□□□□□ -0.62
CSF1R-203ENST00000504875 POLR3EQ9NVU0 708 aa11.2□□□□□ -0.62
CSF1R-203ENST00000504875 TNKSO95271 1327 aa11.19□□□□□ -0.62
CSF1R-203ENST00000504875 TSPY2A6NKD2 308 aa11.19□□□□□ -0.62
CSF1R-203ENST00000504875 TNNT1P13805 278 aa11.19□□□□□ -0.62
CSF1R-203ENST00000504875 TPTE2Q6XPS3 522 aa11.19□□□□□ -0.62
CSF1R-203ENST00000504875 AMOTL1Q8IY63 956 aa11.19□□□□□ -0.62
CSF1R-203ENST00000504875 TMTC2Q8N394 836 aa11.19□□□□□ -0.62
CSF1R-203ENST00000504875 NBPF3Q9H094 633 aa11.19□□□□□ -0.62
CSF1R-203ENST00000504875 IFNKQ9P0W0 207 aa11.19□□□□□ -0.62
CSF1R-203ENST00000504875 RTCBQ9Y3I0 505 aaKnown RBP11.19□□□□□ -0.62
CSF1R-203ENST00000504875 USP17L12C9JPN9 530 aa11.19□□□□□ -0.62
CSF1R-203ENST00000504875 USP17L21D6R901 530 aa11.19□□□□□ -0.62
CSF1R-203ENST00000504875 CTCFLQ8NI51 663 aaPredicted RBP11.19□□□□□ -0.62
CSF1R-203ENST00000504875 NKX2-3Q8TAU0 364 aa11.19□□□□□ -0.62
CSF1R-203ENST00000504875 ZNF512BQ96KM6 892 aaPredicted RBP11.19□□□□□ -0.62
CSF1R-203ENST00000504875 VPS54Q9P1Q0 977 aa11.19□□□□□ -0.62
CSF1R-203ENST00000504875 THRAP3Q9Y2W1 955 aaKnown RBP11.19□□□□□ -0.62
CSF1R-203ENST00000504875 SALL1Q9NSC2 1324 aa11.19□□□□□ -0.62
CSF1R-203ENST00000504875 SMTNL1A8MU46 457 aa11.19□□□□□ -0.62
CSF1R-203ENST00000504875 SKILP12757 684 aa11.19□□□□□ -0.62
CSF1R-203ENST00000504875 ADRA2BP18089 450 aa11.19□□□□□ -0.62
CSF1R-203ENST00000504875 HIBADHP31937 336 aaKnown RBP11.19□□□□□ -0.62
CSF1R-203ENST00000504875 SNW1Q13573 536 aaKnown RBP11.19□□□□□ -0.62
CSF1R-203ENST00000504875 FAM47AQ5JRC9 791 aa11.19□□□□□ -0.62
CSF1R-203ENST00000504875 TBC1D9BQ66K14 1250 aa11.19□□□□□ -0.62
CSF1R-203ENST00000504875 FMR1NBQ8N0W7 255 aaPredicted RBP11.19□□□□□ -0.62
CSF1R-203ENST00000504875 IGDCC4Q8TDY8 1250 aa11.19□□□□□ -0.62
CSF1R-203ENST00000504875 KCNF1Q9H3M0 494 aa11.19□□□□□ -0.62
CSF1R-203ENST00000504875 NR5A1Q13285 461 aa11.18□□□□□ -0.62
CSF1R-203ENST00000504875 PNOCQ13519 176 aa11.18□□□□□ -0.62
CSF1R-203ENST00000504875 SLC39A14Q15043 492 aa11.18□□□□□ -0.62
CSF1R-203ENST00000504875 HOMER1Q86YM7 354 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms