RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 CSRNP1Q96S65 589 aa9.43□□□□□ -0.9
SKP2-203ENST00000504386 CRNKL1Q9BZJ0 848 aaKnown RBP9.43□□□□□ -0.9
SKP2-203ENST00000504386 BCL11AQ9H165 835 aa9.43□□□□□ -0.9
SKP2-203ENST00000504386 PIH1D3Q9NQM4 214 aaKnown RBP9.43□□□□□ -0.9
SKP2-203ENST00000504386 SAGE1Q9NXZ1 904 aa9.43□□□□□ -0.9
SKP2-203ENST00000504386 PCDHAC2Q9Y5I4 1007 aa9.43□□□□□ -0.9
SKP2-203ENST00000504386 POLR2AP24928 1970 aaKnown RBP9.43□□□□□ -0.9
SKP2-203ENST00000504386 ATRNL1Q5VV63 1379 aa9.42□□□□□ -0.9
SKP2-203ENST00000504386 AOX1Q06278 1338 aa9.42□□□□□ -0.9
SKP2-203ENST00000504386 NEFLP07196 543 aa9.42□□□□□ -0.9
SKP2-203ENST00000504386 CTCFP49711 727 aaPredicted RBP9.42□□□□□ -0.9
SKP2-203ENST00000504386 CACNB3P54284 484 aa9.42□□□□□ -0.9
SKP2-203ENST00000504386 RHBDL3P58872 404 aa9.42□□□□□ -0.9
SKP2-203ENST00000504386 TCP10Q12799 353 aa9.42□□□□□ -0.9
SKP2-203ENST00000504386 PRKG1Q13976 671 aa9.42□□□□□ -0.9
SKP2-203ENST00000504386 UBE3CQ15386 1083 aa9.42□□□□□ -0.9
SKP2-203ENST00000504386 RASAL3Q86YV0 1011 aa9.42□□□□□ -0.9
SKP2-203ENST00000504386 MAGEB6Q8N7X4 407 aa9.42□□□□□ -0.9
SKP2-203ENST00000504386 EXOC6Q8TAG9 804 aa9.42□□□□□ -0.9
SKP2-203ENST00000504386 TBC1D2Q9BYX2 928 aa9.42□□□□□ -0.9
SKP2-203ENST00000504386 BOLA2Q9H3K6 86 aa9.42□□□□□ -0.9
SKP2-203ENST00000504386 GINM1Q9NU53 330 aa9.42□□□□□ -0.9
SKP2-203ENST00000504386 WBP1LQ9NX94 342 aa9.42□□□□□ -0.9
SKP2-203ENST00000504386 AATFQ9NY61 560 aaKnown RBP eCLIP9.42□□□□□ -0.9
SKP2-203ENST00000504386 PI4KBQ9UBF8 816 aa9.42□□□□□ -0.9
SKP2-203ENST00000504386 HERC5Q9UII4 1024 aaKnown RBP9.42□□□□□ -0.9
SKP2-203ENST00000504386 MAST2Q6P0Q8 1798 aa9.42□□□□□ -0.9
SKP2-203ENST00000504386 RFX7Q2KHR2 1363 aa9.41□□□□□ -0.9
SKP2-203ENST00000504386 MAGEB6P1A0A0J9YX57 407 aa9.41□□□□□ -0.9
SKP2-203ENST00000504386 TBC1D12O60347 775 aa9.41□□□□□ -0.9
SKP2-203ENST00000504386 USP2O75604 605 aaPredicted RBP9.41□□□□□ -0.9
SKP2-203ENST00000504386 HSPA1AP0DMV8 641 aaKnown RBP9.41□□□□□ -0.9
SKP2-203ENST00000504386 HSPA1BP0DMV9 641 aaKnown RBP9.41□□□□□ -0.9
SKP2-203ENST00000504386 PDE6AP16499 860 aa9.41□□□□□ -0.9
SKP2-203ENST00000504386 USP5P45974 858 aa9.41□□□□□ -0.9
SKP2-203ENST00000504386 PICALMQ13492 652 aa9.41□□□□□ -0.9
SKP2-203ENST00000504386 TTC6Q86TZ1 520 aa9.41□□□□□ -0.9
SKP2-203ENST00000504386 FOXP4Q8IVH2 680 aaPredicted RBP9.41□□□□□ -0.9
SKP2-203ENST00000504386 SMC5Q8IY18 1101 aa9.41□□□□□ -0.9
SKP2-203ENST00000504386 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.41□□□□□ -0.9
SKP2-203ENST00000504386 WRNIP1Q96S55 665 aa9.41□□□□□ -0.9
SKP2-203ENST00000504386 OSBPL5Q9H0X9 879 aaPredicted RBP9.41□□□□□ -0.9
SKP2-203ENST00000504386 PICK1Q9NRD5 415 aa9.41□□□□□ -0.9
SKP2-203ENST00000504386 FAM198AQ9UFP1 575 aa9.41□□□□□ -0.9
SKP2-203ENST00000504386 SCAF8Q9UPN6 1271 aaKnown RBP9.41□□□□□ -0.9
SKP2-203ENST00000504386 MYH2Q9UKX2 1941 aa9.41□□□□□ -0.9
SKP2-203ENST00000504386 FAM155AB1AL88 458 aaPredicted RBP9.4□□□□□ -0.9
SKP2-203ENST00000504386 SMARCA5O60264 1052 aaPredicted RBP9.4□□□□□ -0.9
SKP2-203ENST00000504386 CTNND1O60716 968 aaKnown RBP9.4□□□□□ -0.9
SKP2-203ENST00000504386 GTF2A2P52657 109 aa9.4□□□□□ -0.9
SKP2-203ENST00000504386 KIF23Q02241 960 aaPredicted RBP9.4□□□□□ -0.9
SKP2-203ENST00000504386 NFIAQ12857 509 aa9.4□□□□□ -0.9
SKP2-203ENST00000504386 NOL9Q5SY16 702 aaKnown RBP9.4□□□□□ -0.9
SKP2-203ENST00000504386 SPRYD7Q5W111 196 aa9.4□□□□□ -0.9
SKP2-203ENST00000504386 ERO1BQ86YB8 467 aa9.4□□□□□ -0.9
SKP2-203ENST00000504386 CRACR2BQ8N4Y2 399 aaPredicted RBP9.4□□□□□ -0.9
SKP2-203ENST00000504386 KBTBD3Q8NAB2 608 aa9.4□□□□□ -0.9
SKP2-203ENST00000504386 THSD7BQ9C0I4 1608 aa9.4□□□□□ -0.9
SKP2-203ENST00000504386 ZNF532Q9HCE3 1301 aa9.39□□□□□ -0.91
SKP2-203ENST00000504386 SSC5DA1L4H1 1573 aa9.39□□□□□ -0.91
SKP2-203ENST00000504386 SPDYE5A6NIY4 337 aa9.39□□□□□ -0.91
SKP2-203ENST00000504386 CETPP11597 493 aa9.39□□□□□ -0.91
SKP2-203ENST00000504386 GNAT2P19087 354 aa9.39□□□□□ -0.91
SKP2-203ENST00000504386 ADD2P35612 726 aa9.39□□□□□ -0.91
SKP2-203ENST00000504386 MAP3K10Q02779 954 aa9.39□□□□□ -0.91
SKP2-203ENST00000504386 PPATQ06203 517 aa9.39□□□□□ -0.91
SKP2-203ENST00000504386 MKRN4PQ13434 485 aaPredicted RBP9.39□□□□□ -0.91
SKP2-203ENST00000504386 VGLL4Q14135 290 aa9.39□□□□□ -0.91
SKP2-203ENST00000504386 DLK2Q6UY11 383 aa9.39□□□□□ -0.91
SKP2-203ENST00000504386 CHD1LQ86WJ1 897 aa9.39□□□□□ -0.91
SKP2-203ENST00000504386 SH3RF3Q8TEJ3 882 aaPredicted RBP9.39□□□□□ -0.91
SKP2-203ENST00000504386 ZNF384Q8TF68 577 aa9.39□□□□□ -0.91
SKP2-203ENST00000504386 TGFBRAP1Q8WUH2 860 aa9.39□□□□□ -0.91
SKP2-203ENST00000504386 EVI5LQ96CN4 794 aa9.39□□□□□ -0.91
SKP2-203ENST00000504386 WNK4Q96J92 1243 aa9.39□□□□□ -0.91
SKP2-203ENST00000504386 ANTXR1Q9H6X2 564 aa9.39□□□□□ -0.91
SKP2-203ENST00000504386 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.39□□□□□ -0.91
SKP2-203ENST00000504386 ZCCHC17Q9NP64 241 aaKnown RBP9.39□□□□□ -0.91
SKP2-203ENST00000504386 PRDM10Q9NQV6 1147 aa9.39□□□□□ -0.91
SKP2-203ENST00000504386 ATP8A2Q9NTI2 1148 aa9.39□□□□□ -0.91
SKP2-203ENST00000504386 STAP2Q9UGK3 403 aa9.39□□□□□ -0.91
SKP2-203ENST00000504386 ZNF112Q9UJU3 913 aa9.39□□□□□ -0.91
SKP2-203ENST00000504386 AKAP11Q9UKA4 1901 aa9.39□□□□□ -0.91
SKP2-203ENST00000504386 FLT1P17948 1338 aa9.38□□□□□ -0.91
SKP2-203ENST00000504386 RNF113AO15541 343 aaKnown RBP9.38□□□□□ -0.91
SKP2-203ENST00000504386 AOC2O75106 756 aa9.38□□□□□ -0.91
SKP2-203ENST00000504386 TM4SF4P48230 202 aa9.38□□□□□ -0.91
SKP2-203ENST00000504386 NUCB1Q02818 461 aa9.38□□□□□ -0.91
SKP2-203ENST00000504386 PPIL2Q13356 520 aa9.38□□□□□ -0.91
SKP2-203ENST00000504386 SNAPC2Q13487 334 aa9.38□□□□□ -0.91
SKP2-203ENST00000504386 NOM1Q5C9Z4 860 aaKnown RBP9.38□□□□□ -0.91
SKP2-203ENST00000504386 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.38□□□□□ -0.91
SKP2-203ENST00000504386 MOB2Q70IA6 237 aa9.38□□□□□ -0.91
SKP2-203ENST00000504386 SCYL3Q8IZE3 742 aa9.38□□□□□ -0.91
SKP2-203ENST00000504386 MIGA1Q8NAN2 632 aa9.38□□□□□ -0.91
SKP2-203ENST00000504386 APPBP2Q92624 585 aa9.38□□□□□ -0.91
SKP2-203ENST00000504386 OPTNQ96CV9 577 aa9.38□□□□□ -0.91
SKP2-203ENST00000504386 FSD1Q9BTV5 496 aa9.38□□□□□ -0.91
SKP2-203ENST00000504386 NACAP1Q9BZK3 213 aa9.38□□□□□ -0.91
SKP2-203ENST00000504386 EHD4Q9H223 541 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms