RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 ARHGAP27Q6ZUM4 889 aa7.55□□□□□ -1.2
SUB1-204ENST00000504016 SPRED2Q7Z698 418 aa7.55□□□□□ -1.2
SUB1-204ENST00000504016 PLD6Q8N2A8 252 aaKnown RBP7.55□□□□□ -1.2
SUB1-204ENST00000504016 FAM181AQ8N9Y4 354 aa7.55□□□□□ -1.2
SUB1-204ENST00000504016 NETO1Q8TDF5 533 aa7.55□□□□□ -1.2
SUB1-204ENST00000504016 MISP3Q96FF7 219 aa7.55□□□□□ -1.2
SUB1-204ENST00000504016 TRAIPQ9BWF2 469 aa7.55□□□□□ -1.2
SUB1-204ENST00000504016 PNMA6FA0A0J9YX94 578 aa7.54□□□□□ -1.2
SUB1-204ENST00000504016 MAPK1P28482 360 aa7.54□□□□□ -1.2
SUB1-204ENST00000504016 MAP1SQ66K74 1059 aaPredicted RBP7.54□□□□□ -1.2
SUB1-204ENST00000504016 OGFOD2Q6N063 350 aa7.54□□□□□ -1.2
SUB1-204ENST00000504016 STK35Q8TDR2 534 aa7.54□□□□□ -1.2
SUB1-204ENST00000504016 EMILIN2Q9BXX0 1053 aa7.54□□□□□ -1.2
SUB1-204ENST00000504016 CBX8Q9HC52 389 aa7.54□□□□□ -1.2
SUB1-204ENST00000504016 LEFTY1O75610 366 aa7.53□□□□□ -1.2
SUB1-204ENST00000504016 BRD1O95696 1058 aa7.53□□□□□ -1.2
SUB1-204ENST00000504016 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.53□□□□□ -1.2
SUB1-204ENST00000504016 HOMEZQ8IX15 550 aa7.53□□□□□ -1.2
SUB1-204ENST00000504016 ACSBG1Q96GR2 724 aa7.53□□□□□ -1.2
SUB1-204ENST00000504016 NME2P22392 152 aa7.52□□□□□ -1.21
SUB1-204ENST00000504016 ZNF792Q3KQV3 632 aa7.52□□□□□ -1.21
SUB1-204ENST00000504016 ZC3H12AQ5D1E8 599 aaKnown RBP7.52□□□□□ -1.21
SUB1-204ENST00000504016 GPBAR1Q8TDU6 330 aa7.52□□□□□ -1.21
SUB1-204ENST00000504016 ISL2Q96A47 359 aa7.52□□□□□ -1.21
SUB1-204ENST00000504016 DUSP23Q9BVJ7 150 aa7.52□□□□□ -1.21
SUB1-204ENST00000504016 GNEQ9Y223 722 aaKnown RBP7.52□□□□□ -1.21
SUB1-204ENST00000504016 BIN1O00499 593 aa7.51□□□□□ -1.21
SUB1-204ENST00000504016 NEFMP07197 916 aa7.51□□□□□ -1.21
SUB1-204ENST00000504016 ERVK-24P63145 666 aa7.51□□□□□ -1.21
SUB1-204ENST00000504016 DSC3Q14574 896 aa7.51□□□□□ -1.21
SUB1-204ENST00000504016 ENOX2Q16206 610 aaKnown RBP7.51□□□□□ -1.21
SUB1-204ENST00000504016 RNF214Q8ND24 703 aa7.51□□□□□ -1.21
SUB1-204ENST00000504016 VAV3Q9UKW4 847 aa7.51□□□□□ -1.21
SUB1-204ENST00000504016 IVNS1ABPQ9Y6Y0 642 aa7.51□□□□□ -1.21
SUB1-204ENST00000504016 TREHO43280 583 aa7.5□□□□□ -1.21
SUB1-204ENST00000504016 CD8BP10966 210 aa7.5□□□□□ -1.21
SUB1-204ENST00000504016 PRKCQQ04759 706 aa7.5□□□□□ -1.21
SUB1-204ENST00000504016 IFI16Q16666 785 aaKnown RBP7.5□□□□□ -1.21
SUB1-204ENST00000504016 WFDC3Q8IUB2 231 aa7.5□□□□□ -1.21
SUB1-204ENST00000504016 TOP6BLQ8N6T0 577 aa7.5□□□□□ -1.21
SUB1-204ENST00000504016 PAPLNO95428 1278 aa7.49□□□□□ -1.21
SUB1-204ENST00000504016 GSTT1P30711 240 aa7.49□□□□□ -1.21
SUB1-204ENST00000504016 ZNF252P-AS1Q0IIN9 211 aa7.49□□□□□ -1.21
SUB1-204ENST00000504016 FZD5Q13467 585 aa7.49□□□□□ -1.21
SUB1-204ENST00000504016 AOC3Q16853 763 aa7.49□□□□□ -1.21
SUB1-204ENST00000504016 TPTE2Q6XPS3 522 aa7.49□□□□□ -1.21
SUB1-204ENST00000504016 HRASLS5Q96KN8 279 aa7.49□□□□□ -1.21
SUB1-204ENST00000504016 NECAB3Q96P71 396 aaPredicted RBP7.49□□□□□ -1.21
SUB1-204ENST00000504016 MKNK2Q9HBH9 465 aa7.49□□□□□ -1.21
SUB1-204ENST00000504016 PICK1Q9NRD5 415 aa7.49□□□□□ -1.21
SUB1-204ENST00000504016 SAMM50Q9Y512 469 aa7.49□□□□□ -1.21
SUB1-204ENST00000504016 CSADQ9Y600 493 aa7.49□□□□□ -1.21
SUB1-204ENST00000504016 U3KQE9 123 aa7.49□□□□□ -1.21
SUB1-204ENST00000504016 CEACAM5P06731 702 aa7.48□□□□□ -1.21
SUB1-204ENST00000504016 FUT4P22083 530 aa7.48□□□□□ -1.21
SUB1-204ENST00000504016 CD96P40200 585 aa7.48□□□□□ -1.21
SUB1-204ENST00000504016 MAPK8P45983 427 aa7.48□□□□□ -1.21
SUB1-204ENST00000504016 OXCT1P55809 520 aa7.48□□□□□ -1.21
SUB1-204ENST00000504016 MPRIPQ6WCQ1 1025 aa7.48□□□□□ -1.21
SUB1-204ENST00000504016 POU5F2Q8N7G0 328 aa7.48□□□□□ -1.21
SUB1-204ENST00000504016 C3orf58Q8NDZ4 430 aa7.48□□□□□ -1.21
SUB1-204ENST00000504016 PI4K2BQ8TCG2 481 aa7.48□□□□□ -1.21
SUB1-204ENST00000504016 CEP44Q9C0F1 390 aa7.48□□□□□ -1.21
SUB1-204ENST00000504016 RC3H2Q9HBD1 1191 aaKnown RBP7.48□□□□□ -1.21
SUB1-204ENST00000504016 TMEM265A0A087WTH1 108 aa7.47□□□□□ -1.21
SUB1-204ENST00000504016 ITIH2P19823 946 aa7.47□□□□□ -1.21
SUB1-204ENST00000504016 PPM1JQ5JR12 505 aa7.47□□□□□ -1.21
SUB1-204ENST00000504016 GRIN3AQ8TCU5 1115 aa7.47□□□□□ -1.21
SUB1-204ENST00000504016 DCDC2CA8MYV0 355 aa7.46□□□□□ -1.22
SUB1-204ENST00000504016 RNASE1P07998 156 aaKnown RBP7.46□□□□□ -1.22
SUB1-204ENST00000504016 BMP6P22004 513 aa7.46□□□□□ -1.22
SUB1-204ENST00000504016 SRCIN1Q9C0H9 1055 aa7.46□□□□□ -1.22
SUB1-204ENST00000504016 PLAGL2Q9UPG8 496 aa7.46□□□□□ -1.22
SUB1-204ENST00000504016 ENC1O14682 589 aa7.45□□□□□ -1.22
SUB1-204ENST00000504016 FBXO24O75426 580 aa7.45□□□□□ -1.22
SUB1-204ENST00000504016 PAGE1O75459 146 aa7.45□□□□□ -1.22
SUB1-204ENST00000504016 C8AP07357 584 aa7.45□□□□□ -1.22
SUB1-204ENST00000504016 KCNA1Q09470 495 aa7.45□□□□□ -1.22
SUB1-204ENST00000504016 ATG4DQ86TL0 474 aaPredicted RBP7.45□□□□□ -1.22
SUB1-204ENST00000504016 C12orf40Q86WS4 652 aa7.45□□□□□ -1.22
SUB1-204ENST00000504016 ZSCAN29Q8IWY8 852 aaPredicted RBP7.45□□□□□ -1.22
SUB1-204ENST00000504016 FBF1Q8TES7 1133 aa7.45□□□□□ -1.22
SUB1-204ENST00000504016 PRDM10Q9NQV6 1147 aa7.45□□□□□ -1.22
SUB1-204ENST00000504016 MBNL3Q9NUK0 354 aaKnown RBP7.45□□□□□ -1.22
SUB1-204ENST00000504016 CACNA2D2Q9NY47 1150 aa7.45□□□□□ -1.22
SUB1-204ENST00000504016 GTF2IRD1Q9UHL9 959 aa7.45□□□□□ -1.22
SUB1-204ENST00000504016 ADAMTS6Q9UKP5 1117 aa7.45□□□□□ -1.22
SUB1-204ENST00000504016 PPM1HQ9ULR3 514 aa7.45□□□□□ -1.22
SUB1-204ENST00000504016 TRIM37O94972 964 aa7.44□□□□□ -1.22
SUB1-204ENST00000504016 LRRC14Q15048 493 aa7.44□□□□□ -1.22
SUB1-204ENST00000504016 ANGEL2Q5VTE6 544 aaKnown RBP7.44□□□□□ -1.22
SUB1-204ENST00000504016 ALG1LQ6GMV1 187 aa7.44□□□□□ -1.22
SUB1-204ENST00000504016 LLGL2Q6P1M3 1020 aa7.44□□□□□ -1.22
SUB1-204ENST00000504016 CDC37L1Q7L3B6 337 aa7.44□□□□□ -1.22
SUB1-204ENST00000504016 HEXIM2Q96MH2 286 aaKnown RBP7.44□□□□□ -1.22
SUB1-204ENST00000504016 OSBPL7Q9BZF2 842 aa7.44□□□□□ -1.22
SUB1-204ENST00000504016 PCDHA4Q9UN74 947 aa7.44□□□□□ -1.22
SUB1-204ENST00000504016 SNX11Q9Y5W9 270 aa7.44□□□□□ -1.22
SUB1-204ENST00000504016 KRTAP4-8A0A0G2JLE6 195 aa7.43□□□□□ -1.22
SUB1-204ENST00000504016 GIPC1O14908 333 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms