RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 MCAMP43121 646 aa27.07■■□□□ 1.92
LSM6-203ENST00000503982 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.07■■□□□ 1.92
LSM6-203ENST00000503982 PANK1Q8TE04 598 aa27.07■■□□□ 1.92
LSM6-203ENST00000503982 DBNDD2Q9BQY9 259 aa27.07■■□□□ 1.92
LSM6-203ENST00000503982 EFCC1Q9HA90 598 aa27.07■■□□□ 1.92
LSM6-203ENST00000503982 GPR108Q9NPR9 543 aa27.07■■□□□ 1.92
LSM6-203ENST00000503982 BTBD19C9JJ37 291 aa27.05■■□□□ 1.92
LSM6-203ENST00000503982 MS4A1P11836 297 aa27.05■■□□□ 1.92
LSM6-203ENST00000503982 ARHGEF6Q15052 776 aa27.05■■□□□ 1.92
LSM6-203ENST00000503982 ZNF112Q9UJU3 913 aa27.05■■□□□ 1.92
LSM6-203ENST00000503982 GPR75-ASB3A0A0A6YYF3 556 aa27.04■■□□□ 1.92
LSM6-203ENST00000503982 NSUN4Q96CB9 384 aaKnown RBP27.04■■□□□ 1.92
LSM6-203ENST00000503982 DDX4Q9NQI0 724 aaKnown RBP27.04■■□□□ 1.92
LSM6-203ENST00000503982 PICK1Q9NRD5 415 aa27.04■■□□□ 1.92
LSM6-203ENST00000503982 MYO5AQ9Y4I1 1855 aaKnown RBP27.02■■□□□ 1.92
LSM6-203ENST00000503982 MAST2Q6P0Q8 1798 aa27.02■■□□□ 1.92
LSM6-203ENST00000503982 DDTLA6NHG4 134 aaPredicted RBP27.02■■□□□ 1.92
LSM6-203ENST00000503982 KIF22Q14807 665 aa27.02■■□□□ 1.92
LSM6-203ENST00000503982 NOL9Q5SY16 702 aaKnown RBP27.02■■□□□ 1.92
LSM6-203ENST00000503982 SH3BP5LQ7L8J4 393 aa27.02■■□□□ 1.92
LSM6-203ENST00000503982 TEX11Q8IYF3 940 aa27.02■■□□□ 1.92
LSM6-203ENST00000503982 CCDC8Q9H0W5 538 aaPredicted RBP27.02■■□□□ 1.92
LSM6-203ENST00000503982 RFX7Q2KHR2 1363 aa27.01■■□□□ 1.91
LSM6-203ENST00000503982 ECM2O94769 699 aaPredicted RBP27.01■■□□□ 1.91
LSM6-203ENST00000503982 NAA16Q6N069 864 aaPredicted RBP27.01■■□□□ 1.91
LSM6-203ENST00000503982 CEP85Q6P2H3 762 aa27.01■■□□□ 1.91
LSM6-203ENST00000503982 SCYL3Q8IZE3 742 aa27.01■■□□□ 1.91
LSM6-203ENST00000503982 ZCCHC17Q9NP64 241 aaKnown RBP27.01■■□□□ 1.91
LSM6-203ENST00000503982 DOCK1Q14185 1865 aa27.01■■□□□ 1.91
LSM6-203ENST00000503982 RHBDL3P58872 404 aa27■■□□□ 1.91
LSM6-203ENST00000503982 ZNF384Q8TF68 577 aa27■■□□□ 1.91
LSM6-203ENST00000503982 EXOC6BQ9Y2D4 811 aa27■■□□□ 1.91
LSM6-203ENST00000503982 PTPN22Q9Y2R2 807 aa27■■□□□ 1.91
LSM6-203ENST00000503982 NOP58Q9Y2X3 529 aaKnown RBP27■■□□□ 1.91
LSM6-203ENST00000503982 TLR2O60603 784 aa26.99■■□□□ 1.91
LSM6-203ENST00000503982 BCL11AQ9H165 835 aa26.99■■□□□ 1.91
LSM6-203ENST00000503982 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.99■■□□□ 1.91
LSM6-203ENST00000503982 PDHXO00330 501 aa26.98■■□□□ 1.91
LSM6-203ENST00000503982 BAG3O95817 575 aa26.98■■□□□ 1.91
LSM6-203ENST00000503982 MAP4K4O95819 1239 aaPredicted RBP26.98■■□□□ 1.91
LSM6-203ENST00000503982 SLURP2P0DP57 97 aa26.98■■□□□ 1.91
LSM6-203ENST00000503982 ERC1Q8IUD2 1116 aa26.98■■□□□ 1.91
LSM6-203ENST00000503982 AATFQ9NY61 560 aaKnown RBP eCLIP26.98■■□□□ 1.91
LSM6-203ENST00000503982 KCNH4Q9UQ05 1017 aa26.98■■□□□ 1.91
LSM6-203ENST00000503982 ZHX2Q9Y6X8 837 aa26.98■■□□□ 1.91
LSM6-203ENST00000503982 PHF20L1A8MW92 1017 aa26.97■■□□□ 1.91
LSM6-203ENST00000503982 ZAP70P43403 619 aa26.97■■□□□ 1.91
LSM6-203ENST00000503982 GADL1Q6ZQY3 521 aa26.97■■□□□ 1.91
LSM6-203ENST00000503982 ANKRD23Q86SG2 305 aa26.97■■□□□ 1.91
LSM6-203ENST00000503982 TLR7Q9NYK1 1049 aaKnown RBP26.97■■□□□ 1.91
LSM6-203ENST00000503982 DBNLQ9UJU6 430 aaKnown RBP26.97■■□□□ 1.91
LSM6-203ENST00000503982 ATRNL1Q5VV63 1379 aa26.97■■□□□ 1.91
LSM6-203ENST00000503982 FAM196BA6NMK8 535 aa26.96■■□□□ 1.91
LSM6-203ENST00000503982 APBB1O00213 710 aa26.96■■□□□ 1.91
LSM6-203ENST00000503982 CYP2E1P05181 493 aaPredicted RBP26.96■■□□□ 1.91
LSM6-203ENST00000503982 SH3RF3Q8TEJ3 882 aaPredicted RBP26.96■■□□□ 1.91
LSM6-203ENST00000503982 OSBPL5Q9H0X9 879 aaPredicted RBP26.96■■□□□ 1.91
LSM6-203ENST00000503982 COG6Q9Y2V7 657 aa26.96■■□□□ 1.91
LSM6-203ENST00000503982 ZSWIM8A7E2V4 1837 aa26.95■■□□□ 1.91
LSM6-203ENST00000503982 ATAD5Q96QE3 1844 aa26.95■■□□□ 1.91
LSM6-203ENST00000503982 CXCL11O14625 94 aa26.95■■□□□ 1.9
LSM6-203ENST00000503982 PTPRAP18433 802 aa26.95■■□□□ 1.9
LSM6-203ENST00000503982 EAF2Q96CJ1 260 aaPredicted RBP26.95■■□□□ 1.9
LSM6-203ENST00000503982 CPA4Q9UI42 421 aa26.95■■□□□ 1.9
LSM6-203ENST00000503982 CTNND1O60716 968 aaKnown RBP26.94■■□□□ 1.9
LSM6-203ENST00000503982 PLCG2P16885 1265 aa26.94■■□□□ 1.9
LSM6-203ENST00000503982 HSP90AB4PQ58FF6 505 aa26.94■■□□□ 1.9
LSM6-203ENST00000503982 AACSQ86V21 672 aa26.94■■□□□ 1.9
LSM6-203ENST00000503982 NPM3O75607 178 aaKnown RBP26.93■■□□□ 1.9
LSM6-203ENST00000503982 TRIM34Q9BYJ4 488 aa26.93■■□□□ 1.9
LSM6-203ENST00000503982 RCAN3Q9UKA8 241 aa26.93■■□□□ 1.9
LSM6-203ENST00000503982 DDX19BQ9UMR2 479 aa26.93■■□□□ 1.9
LSM6-203ENST00000503982 CDK5RAP2Q96SN8 1893 aa26.93■■□□□ 1.9
LSM6-203ENST00000503982 TRIM75PA6NK02 468 aa26.92■■□□□ 1.9
LSM6-203ENST00000503982 IDH1O75874 414 aaKnown RBP26.92■■□□□ 1.9
LSM6-203ENST00000503982 LACTBP83111 547 aaPredicted RBP26.92■■□□□ 1.9
LSM6-203ENST00000503982 CAP1Q01518 475 aa26.92■■□□□ 1.9
LSM6-203ENST00000503982 FASTKD5Q7L8L6 764 aaKnown RBP26.92■■□□□ 1.9
LSM6-203ENST00000503982 ZNF512BQ96KM6 892 aaPredicted RBP26.92■■□□□ 1.9
LSM6-203ENST00000503982 PARK7Q99497 189 aaKnown RBP26.92■■□□□ 1.9
LSM6-203ENST00000503982 ARHGAP39Q9C0H5 1083 aa26.92■■□□□ 1.9
LSM6-203ENST00000503982 IL1RAPL2Q9NP60 686 aa26.92■■□□□ 1.9
LSM6-203ENST00000503982 PIH1D3Q9NQM4 214 aaKnown RBP26.92■■□□□ 1.9
LSM6-203ENST00000503982 PHIPQ8WWQ0 1821 aa26.91■■□□□ 1.9
LSM6-203ENST00000503982 PTPRFP10586 1907 aa26.91■■□□□ 1.9
LSM6-203ENST00000503982 HMMRO75330 724 aa26.91■■□□□ 1.9
LSM6-203ENST00000503982 SLC9C1Q4G0N8 1177 aa26.91■■□□□ 1.9
LSM6-203ENST00000503982 MAPKAPK5Q8IW41 473 aa26.91■■□□□ 1.9
LSM6-203ENST00000503982 TGFBRAP1Q8WUH2 860 aa26.91■■□□□ 1.9
LSM6-203ENST00000503982 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.91■■□□□ 1.9
LSM6-203ENST00000503982 PTCH2Q9Y6C5 1203 aa26.91■■□□□ 1.9
LSM6-203ENST00000503982 TBC1D12O60347 775 aa26.9■■□□□ 1.9
LSM6-203ENST00000503982 CYP7A1P22680 504 aa26.9■■□□□ 1.9
LSM6-203ENST00000503982 MAP3K10Q02779 954 aa26.9■■□□□ 1.9
LSM6-203ENST00000503982 NBPF11Q86T75 865 aa26.9■■□□□ 1.9
LSM6-203ENST00000503982 CCDC84Q86UT8 332 aaPredicted RBP26.9■■□□□ 1.9
LSM6-203ENST00000503982 CHMP4BQ9H444 224 aaKnown RBP26.9■■□□□ 1.9
LSM6-203ENST00000503982 AFG3L2Q9Y4W6 797 aa26.9■■□□□ 1.9
LSM6-203ENST00000503982 FOCADQ5VW36 1801 aa26.9■■□□□ 1.9
LSM6-203ENST00000503982 COL2A1P02458 1487 aaPredicted RBP26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms