RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 TTLL12Q14166 644 aaPredicted RBP19.9■□□□□ 0.78
SCLT1-205ENST00000503401 TTC22Q5TAA0 569 aa19.9■□□□□ 0.78
SCLT1-205ENST00000503401 SH3BP5LQ7L8J4 393 aa19.9■□□□□ 0.78
SCLT1-205ENST00000503401 ZSCAN29Q8IWY8 852 aaPredicted RBP19.9■□□□□ 0.78
SCLT1-205ENST00000503401 OSBP2Q969R2 916 aa19.9■□□□□ 0.78
SCLT1-205ENST00000503401 ENTPD3O75355 529 aa19.89■□□□□ 0.77
SCLT1-205ENST00000503401 SUPT20HL1Q3ZLR7 823 aa19.89■□□□□ 0.77
SCLT1-205ENST00000503401 C2orf69Q8N8R5 385 aa19.89■□□□□ 0.77
SCLT1-205ENST00000503401 SEC62Q99442 399 aaKnown RBP19.89■□□□□ 0.77
SCLT1-205ENST00000503401 MYH1P12882 1939 aa19.89■□□□□ 0.77
SCLT1-205ENST00000503401 FLT1P17948 1338 aa19.89■□□□□ 0.77
SCLT1-205ENST00000503401 PAPPA2Q9BXP8 1791 aa19.88■□□□□ 0.77
SCLT1-205ENST00000503401 DDTLA6NHG4 134 aaPredicted RBP19.88■□□□□ 0.77
SCLT1-205ENST00000503401 ZFYP08048 801 aaPredicted RBP19.88■□□□□ 0.77
SCLT1-205ENST00000503401 SLURP2P0DP57 97 aa19.88■□□□□ 0.77
SCLT1-205ENST00000503401 USP5P45974 858 aa19.88■□□□□ 0.77
SCLT1-205ENST00000503401 MIGA2Q7L4E1 593 aa19.88■□□□□ 0.77
SCLT1-205ENST00000503401 APPBP2Q92624 585 aa19.88■□□□□ 0.77
SCLT1-205ENST00000503401 OSBPL5Q9H0X9 879 aaPredicted RBP19.88■□□□□ 0.77
SCLT1-205ENST00000503401 RPAP1Q9BWH6 1393 aaPredicted RBP19.88■□□□□ 0.77
SCLT1-205ENST00000503401 M0R2C6 588 aa19.87■□□□□ 0.77
SCLT1-205ENST00000503401 SLC4A8Q2Y0W8 1093 aa19.87■□□□□ 0.77
SCLT1-205ENST00000503401 SAPCD2Q86UD0 394 aa19.87■□□□□ 0.77
SCLT1-205ENST00000503401 SDR42E1Q8WUS8 393 aa19.87■□□□□ 0.77
SCLT1-205ENST00000503401 AIDAQ96BJ3 306 aa19.87■□□□□ 0.77
SCLT1-205ENST00000503401 SAP30BPQ9UHR5 308 aaKnown RBP19.87■□□□□ 0.77
SCLT1-205ENST00000503401 ANGEL1Q9UNK9 670 aaKnown RBP19.87■□□□□ 0.77
SCLT1-205ENST00000503401 TLL2Q9Y6L7 1015 aa19.87■□□□□ 0.77
SCLT1-205ENST00000503401 BAZ2AQ9UIF9 1905 aaKnown RBP19.87■□□□□ 0.77
SCLT1-205ENST00000503401 NAV1Q8NEY1 1877 aa19.87■□□□□ 0.77
SCLT1-205ENST00000503401 UBE2Q2LH0YL09 131 aa19.87■□□□□ 0.77
SCLT1-205ENST00000503401 PRKAB2O43741 272 aa19.87■□□□□ 0.77
SCLT1-205ENST00000503401 HUNKP57058 714 aa19.87■□□□□ 0.77
SCLT1-205ENST00000503401 LRRFIP1Q32MZ4 808 aaKnown RBP19.87■□□□□ 0.77
SCLT1-205ENST00000503401 CSRNP1Q96S65 589 aa19.87■□□□□ 0.77
SCLT1-205ENST00000503401 NPM3O75607 178 aaKnown RBP19.86■□□□□ 0.77
SCLT1-205ENST00000503401 CERS3Q8IU89 383 aa19.86■□□□□ 0.77
SCLT1-205ENST00000503401 CRNKL1Q9BZJ0 848 aaKnown RBP19.86■□□□□ 0.77
SCLT1-205ENST00000503401 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.86■□□□□ 0.77
SCLT1-205ENST00000503401 MKRN1Q9UHC7 482 aaKnown RBP19.86■□□□□ 0.77
SCLT1-205ENST00000503401 PPP1R12BO60237 982 aaPredicted RBP19.85■□□□□ 0.77
SCLT1-205ENST00000503401 SDSP20132 328 aa19.85■□□□□ 0.77
SCLT1-205ENST00000503401 ZMYM1Q5SVZ6 1142 aa19.85■□□□□ 0.77
SCLT1-205ENST00000503401 FAM227BQ96M60 508 aa19.85■□□□□ 0.77
SCLT1-205ENST00000503401 PALD1Q9ULE6 856 aa19.85■□□□□ 0.77
SCLT1-205ENST00000503401 OTOFQ9HC10 1997 aa19.85■□□□□ 0.77
SCLT1-205ENST00000503401 SIPA1L1O43166 1804 aa19.84■□□□□ 0.77
SCLT1-205ENST00000503401 GPAA1O43292 621 aa19.84■□□□□ 0.77
SCLT1-205ENST00000503401 USP2O75604 605 aaPredicted RBP19.84■□□□□ 0.77
SCLT1-205ENST00000503401 CCDC129Q6ZRS4 1044 aa19.84■□□□□ 0.77
SCLT1-205ENST00000503401 ARMC9Q7Z3E5 817 aa19.84■□□□□ 0.77
SCLT1-205ENST00000503401 STRBPQ96SI9 672 aaKnown RBP19.84■□□□□ 0.77
SCLT1-205ENST00000503401 ATRNL1Q5VV63 1379 aa19.84■□□□□ 0.77
SCLT1-205ENST00000503401 A0A0D9SFI3 127 aa19.84■□□□□ 0.77
SCLT1-205ENST00000503401 FKBP1BP68106 108 aa19.84■□□□□ 0.77
SCLT1-205ENST00000503401 PAXIP1Q6ZW49 1069 aaPredicted RBP19.84■□□□□ 0.77
SCLT1-205ENST00000503401 SLC4A4Q9Y6R1 1079 aa19.84■□□□□ 0.77
SCLT1-205ENST00000503401 DDX60LQ5H9U9 1706 aaKnown RBP19.83■□□□□ 0.77
SCLT1-205ENST00000503401 FAM196BA6NMK8 535 aa19.83■□□□□ 0.76
SCLT1-205ENST00000503401 GRM1Q13255 1194 aa19.83■□□□□ 0.76
SCLT1-205ENST00000503401 NMIQ13287 307 aaPredicted RBP19.83■□□□□ 0.76
SCLT1-205ENST00000503401 DCP1AQ9NPI6 582 aaPredicted RBP19.83■□□□□ 0.76
SCLT1-205ENST00000503401 RASSF10A6NK89 507 aa19.82■□□□□ 0.76
SCLT1-205ENST00000503401 DEFB115Q30KQ5 88 aa19.82■□□□□ 0.76
SCLT1-205ENST00000503401 CYP4F22Q6NT55 531 aa19.82■□□□□ 0.76
SCLT1-205ENST00000503401 COL2A1P02458 1487 aaPredicted RBP19.82■□□□□ 0.76
SCLT1-205ENST00000503401 IREB2P48200 963 aaKnown RBP19.81■□□□□ 0.76
SCLT1-205ENST00000503401 EVX2Q03828 476 aa19.81■□□□□ 0.76
SCLT1-205ENST00000503401 KLRG1Q96E93 195 aa19.81■□□□□ 0.76
SCLT1-205ENST00000503401 CLMNQ96JQ2 1002 aa19.81■□□□□ 0.76
SCLT1-205ENST00000503401 MCM9Q9NXL9 1143 aa19.81■□□□□ 0.76
SCLT1-205ENST00000503401 MAP3K11Q16584 847 aa19.8■□□□□ 0.76
SCLT1-205ENST00000503401 DCAF15Q66K64 600 aa19.8■□□□□ 0.76
SCLT1-205ENST00000503401 CWC27Q6UX04 472 aaKnown RBP19.8■□□□□ 0.76
SCLT1-205ENST00000503401 HOOK2Q96ED9 719 aa19.8■□□□□ 0.76
SCLT1-205ENST00000503401 WRNIP1Q96S55 665 aa19.8■□□□□ 0.76
SCLT1-205ENST00000503401 ZNF157P51786 506 aaPredicted RBP19.8■□□□□ 0.76
SCLT1-205ENST00000503401 LDLRAD1Q5T700 205 aa19.8■□□□□ 0.76
SCLT1-205ENST00000503401 RGMBQ6NW40 437 aa19.8■□□□□ 0.76
SCLT1-205ENST00000503401 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.8■□□□□ 0.76
SCLT1-205ENST00000503401 ZNF341Q9BYN7 854 aa19.8■□□□□ 0.76
SCLT1-205ENST00000503401 DHX36Q9H2U1 1008 aaKnown RBP19.8■□□□□ 0.76
SCLT1-205ENST00000503401 HELLSQ9NRZ9 838 aa19.8■□□□□ 0.76
SCLT1-205ENST00000503401 DIAPH3Q9NSV4 1193 aa19.8■□□□□ 0.76
SCLT1-205ENST00000503401 ATP8A2Q9NTI2 1148 aa19.8■□□□□ 0.76
SCLT1-205ENST00000503401 PI4KBQ9UBF8 816 aa19.8■□□□□ 0.76
SCLT1-205ENST00000503401 GSG1L2A8MUP6 293 aa19.79■□□□□ 0.76
SCLT1-205ENST00000503401 POLR3DP05423 398 aaPredicted RBP19.79■□□□□ 0.76
SCLT1-205ENST00000503401 CYP2D6P10635 497 aa19.79■□□□□ 0.76
SCLT1-205ENST00000503401 INPP5BP32019 993 aa19.79■□□□□ 0.76
SCLT1-205ENST00000503401 PLCD1P51178 756 aa19.79■□□□□ 0.76
SCLT1-205ENST00000503401 MCMDC2Q4G0Z9 681 aa19.79■□□□□ 0.76
SCLT1-205ENST00000503401 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.79■□□□□ 0.76
SCLT1-205ENST00000503401 ZNF589Q86UQ0 364 aaPredicted RBP19.79■□□□□ 0.76
SCLT1-205ENST00000503401 DNAJC5GQ8N7S2 189 aa19.79■□□□□ 0.76
SCLT1-205ENST00000503401 ZKSCAN4Q969J2 545 aaPredicted RBP19.79■□□□□ 0.76
SCLT1-205ENST00000503401 CYP2D7A0A087X1C5 515 aa19.78■□□□□ 0.76
SCLT1-205ENST00000503401 SMIM22K7EJ46 135 aa19.78■□□□□ 0.76
SCLT1-205ENST00000503401 APPP05067 770 aa19.78■□□□□ 0.76
SCLT1-205ENST00000503401 VEGFBP49765 207 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms