RNA–Protein interactions for RNA: ENST00000503123.5

RNF4-203, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-203ENST00000503123 RGS3P49796 1198 aa10.7□□□□□ -0.7
RNF4-203ENST00000503123 LBX1P52954 281 aa10.7□□□□□ -0.7
RNF4-203ENST00000503123 MAP3K9P80192 1104 aa10.7□□□□□ -0.7
RNF4-203ENST00000503123 MAP3K10Q02779 954 aa10.7□□□□□ -0.7
RNF4-203ENST00000503123 VGLL4Q14135 290 aa10.7□□□□□ -0.7
RNF4-203ENST00000503123 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.7□□□□□ -0.7
RNF4-203ENST00000503123 ZNF341Q9BYN7 854 aa10.7□□□□□ -0.7
RNF4-203ENST00000503123 CSADQ9Y600 493 aa10.7□□□□□ -0.7
RNF4-203ENST00000503123 ATP5JP18859 108 aa10.69□□□□□ -0.7
RNF4-203ENST00000503123 TCP10Q12799 353 aa10.69□□□□□ -0.7
RNF4-203ENST00000503123 MAP3K12Q12852 859 aa10.69□□□□□ -0.7
RNF4-203ENST00000503123 NOM1Q5C9Z4 860 aaKnown RBP10.69□□□□□ -0.7
RNF4-203ENST00000503123 COL13A1Q5TAT6 717 aaPredicted RBP10.69□□□□□ -0.7
RNF4-203ENST00000503123 WRNIP1Q96S55 665 aa10.69□□□□□ -0.7
RNF4-203ENST00000503123 CFHR5Q9BXR6 569 aa10.69□□□□□ -0.7
RNF4-203ENST00000503123 PIH1D3Q9NQM4 214 aaKnown RBP10.69□□□□□ -0.7
RNF4-203ENST00000503123 RNF186Q9NXI6 227 aa10.69□□□□□ -0.7
RNF4-203ENST00000503123 ZNF112Q9UJU3 913 aa10.69□□□□□ -0.7
RNF4-203ENST00000503123 PCDHB15Q9Y5E8 787 aa10.69□□□□□ -0.7
RNF4-203ENST00000503123 LOC285556D6RIA3 1793 aa10.69□□□□□ -0.7
RNF4-203ENST00000503123 SPDYE5A6NIY4 337 aa10.68□□□□□ -0.7
RNF4-203ENST00000503123 IDH1O75874 414 aaKnown RBP10.68□□□□□ -0.7
RNF4-203ENST00000503123 ALDH1A1P00352 501 aa10.68□□□□□ -0.7
RNF4-203ENST00000503123 NOL9Q5SY16 702 aaKnown RBP10.68□□□□□ -0.7
RNF4-203ENST00000503123 ERO1BQ86YB8 467 aa10.68□□□□□ -0.7
RNF4-203ENST00000503123 CRBNQ96SW2 442 aa10.68□□□□□ -0.7
RNF4-203ENST00000503123 DDX4Q9NQI0 724 aaKnown RBP10.68□□□□□ -0.7
RNF4-203ENST00000503123 DOCK3Q8IZD9 2030 aa10.68□□□□□ -0.7
RNF4-203ENST00000503123 TESPA1A2RU30 521 aaPredicted RBP10.67□□□□□ -0.7
RNF4-203ENST00000503123 TBC1D12O60347 775 aa10.67□□□□□ -0.7
RNF4-203ENST00000503123 TRPA1O75762 1119 aa10.67□□□□□ -0.7
RNF4-203ENST00000503123 GJA5P36382 358 aa10.67□□□□□ -0.7
RNF4-203ENST00000503123 HDAC1Q13547 482 aaPredicted RBP10.67□□□□□ -0.7
RNF4-203ENST00000503123 SH3BP5LQ7L8J4 393 aa10.67□□□□□ -0.7
RNF4-203ENST00000503123 ADGRA1Q86SQ6 560 aa10.67□□□□□ -0.7
RNF4-203ENST00000503123 ZFPM1Q8IX07 1006 aa10.67□□□□□ -0.7
RNF4-203ENST00000503123 TEX11Q8IYF3 940 aa10.67□□□□□ -0.7
RNF4-203ENST00000503123 OPTNQ96CV9 577 aa10.67□□□□□ -0.7
RNF4-203ENST00000503123 GPATCH3Q96I76 525 aa10.67□□□□□ -0.7
RNF4-203ENST00000503123 HAUS7Q99871 368 aa10.67□□□□□ -0.7
RNF4-203ENST00000503123 OSBPL5Q9H0X9 879 aaPredicted RBP10.67□□□□□ -0.7
RNF4-203ENST00000503123 DHX36Q9H2U1 1008 aaKnown RBP10.67□□□□□ -0.7
RNF4-203ENST00000503123 ANTXR1Q9H6X2 564 aa10.67□□□□□ -0.7
RNF4-203ENST00000503123 ELP3Q9H9T3 547 aa10.67□□□□□ -0.7
RNF4-203ENST00000503123 AATFQ9NY61 560 aaKnown RBP eCLIP10.67□□□□□ -0.7
RNF4-203ENST00000503123 SNCAIPQ9Y6H5 919 aa10.67□□□□□ -0.7
RNF4-203ENST00000503123 DDTLA6NHG4 134 aaPredicted RBP10.66□□□□□ -0.7
RNF4-203ENST00000503123 PHF20L1A8MW92 1017 aa10.66□□□□□ -0.7
RNF4-203ENST00000503123 CYP7A1P22680 504 aa10.66□□□□□ -0.7
RNF4-203ENST00000503123 GTF2A2P52657 109 aa10.66□□□□□ -0.7
RNF4-203ENST00000503123 PPATQ06203 517 aa10.66□□□□□ -0.7
RNF4-203ENST00000503123 PPIL2Q13356 520 aa10.66□□□□□ -0.7
RNF4-203ENST00000503123 PICALMQ13492 652 aa10.66□□□□□ -0.7
RNF4-203ENST00000503123 OTUD7BQ6GQQ9 843 aa10.66□□□□□ -0.7
RNF4-203ENST00000503123 MIGA2Q7L4E1 593 aa10.66□□□□□ -0.7
RNF4-203ENST00000503123 IFNL1Q8IU54 200 aa10.66□□□□□ -0.7
RNF4-203ENST00000503123 ZSCAN29Q8IWY8 852 aaPredicted RBP10.66□□□□□ -0.7
RNF4-203ENST00000503123 MAGEB6Q8N7X4 407 aa10.66□□□□□ -0.7
RNF4-203ENST00000503123 SH3RF3Q8TEJ3 882 aaPredicted RBP10.66□□□□□ -0.7
RNF4-203ENST00000503123 GCC1Q96CN9 775 aa10.66□□□□□ -0.7
RNF4-203ENST00000503123 MS4A4AQ96JQ5 239 aa10.66□□□□□ -0.7
RNF4-203ENST00000503123 ECHDC1Q9NTX5 307 aa10.66□□□□□ -0.7
RNF4-203ENST00000503123 PAG1Q9NWQ8 432 aa10.66□□□□□ -0.7
RNF4-203ENST00000503123 NDUFB9Q9Y6M9 179 aa10.66□□□□□ -0.7
RNF4-203ENST00000503123 FLT1P17948 1338 aa10.65□□□□□ -0.7
RNF4-203ENST00000503123 GOLIM4O00461 696 aa10.65□□□□□ -0.7
RNF4-203ENST00000503123 SMARCA5O60264 1052 aaPredicted RBP10.65□□□□□ -0.7
RNF4-203ENST00000503123 CTNND1O60716 968 aaKnown RBP10.65□□□□□ -0.7
RNF4-203ENST00000503123 PDE6AP16499 860 aa10.65□□□□□ -0.7
RNF4-203ENST00000503123 INPP5BP32019 993 aa10.65□□□□□ -0.7
RNF4-203ENST00000503123 MKRN3Q13064 507 aaKnown RBP10.65□□□□□ -0.7
RNF4-203ENST00000503123 SLC9C2Q5TAH2 1124 aa10.65□□□□□ -0.7
RNF4-203ENST00000503123 METTL16Q86W50 562 aaKnown RBP10.65□□□□□ -0.7
RNF4-203ENST00000503123 ZKSCAN4Q969J2 545 aaPredicted RBP10.65□□□□□ -0.7
RNF4-203ENST00000503123 OTUD5Q96G74 571 aa10.65□□□□□ -0.7
RNF4-203ENST00000503123 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.65□□□□□ -0.7
RNF4-203ENST00000503123 ZCCHC17Q9NP64 241 aaKnown RBP10.65□□□□□ -0.7
RNF4-203ENST00000503123 PI4KBQ9UBF8 816 aa10.65□□□□□ -0.7
RNF4-203ENST00000503123 HERC5Q9UII4 1024 aaKnown RBP10.65□□□□□ -0.7
RNF4-203ENST00000503123 TSKSQ9UJT2 592 aa10.65□□□□□ -0.7
RNF4-203ENST00000503123 TTC41PQ6P2S7 1318 aa10.64□□□□□ -0.71
RNF4-203ENST00000503123 TCRBV5S4A2TA0A5A2 114 aa10.64□□□□□ -0.71
RNF4-203ENST00000503123 IGF2BP3O00425 579 aaKnown RBP eCLIP10.64□□□□□ -0.71
RNF4-203ENST00000503123 CETPP11597 493 aa10.64□□□□□ -0.71
RNF4-203ENST00000503123 SNAPC2Q13487 334 aa10.64□□□□□ -0.71
RNF4-203ENST00000503123 SCYL3Q8IZE3 742 aa10.64□□□□□ -0.71
RNF4-203ENST00000503123 TNS4Q8IZW8 715 aa10.64□□□□□ -0.71
RNF4-203ENST00000503123 TGFBRAP1Q8WUH2 860 aa10.64□□□□□ -0.71
RNF4-203ENST00000503123 DNAJC2Q99543 621 aaKnown RBP10.64□□□□□ -0.71
RNF4-203ENST00000503123 RIOK1Q9BRS2 568 aaKnown RBP10.64□□□□□ -0.71
RNF4-203ENST00000503123 BOLA2Q9H3K6 86 aa10.64□□□□□ -0.71
RNF4-203ENST00000503123 KCNH4Q9UQ05 1017 aa10.64□□□□□ -0.71
RNF4-203ENST00000503123 MYH4Q9Y623 1939 aa10.64□□□□□ -0.71
RNF4-203ENST00000503123 KIAA0100Q14667 2235 aaKnown RBP10.64□□□□□ -0.71
RNF4-203ENST00000503123 IRF6O14896 467 aa10.63□□□□□ -0.71
RNF4-203ENST00000503123 ADD2P35612 726 aa10.63□□□□□ -0.71
RNF4-203ENST00000503123 UBE3CQ15386 1083 aa10.63□□□□□ -0.71
RNF4-203ENST00000503123 ZSCAN25Q6NSZ9 544 aa10.63□□□□□ -0.71
RNF4-203ENST00000503123 FOXP4Q8IVH2 680 aaPredicted RBP10.63□□□□□ -0.71
RNF4-203ENST00000503123 CNKSR2Q8WXI2 1034 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms