RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 CCDC102BQ68D86 513 aa7.58□□□□□ -1.2
LSM3P4-201ENST00000502948 GPAT2Q6NUI2 795 aa7.58□□□□□ -1.2
LSM3P4-201ENST00000502948 MIGA2Q7L4E1 593 aa7.58□□□□□ -1.2
LSM3P4-201ENST00000502948 UBE2Q1Q7Z7E8 422 aa7.58□□□□□ -1.2
LSM3P4-201ENST00000502948 PXYLP1Q8TE99 480 aa7.58□□□□□ -1.2
LSM3P4-201ENST00000502948 TRIM47Q96LD4 638 aa7.58□□□□□ -1.2
LSM3P4-201ENST00000502948 USP40Q9NVE5 1235 aa7.58□□□□□ -1.2
LSM3P4-201ENST00000502948 AFG3L2Q9Y4W6 797 aa7.58□□□□□ -1.2
LSM3P4-201ENST00000502948 MAST2Q6P0Q8 1798 aa7.58□□□□□ -1.2
LSM3P4-201ENST00000502948 CCER2I3L3R5 266 aa7.57□□□□□ -1.2
LSM3P4-201ENST00000502948 PTPRAP18433 802 aa7.57□□□□□ -1.2
LSM3P4-201ENST00000502948 OSBPP22059 807 aa7.57□□□□□ -1.2
LSM3P4-201ENST00000502948 GRK4P32298 578 aa7.57□□□□□ -1.2
LSM3P4-201ENST00000502948 PSMC4P43686 418 aa7.57□□□□□ -1.2
LSM3P4-201ENST00000502948 PHKA1P46020 1223 aa7.57□□□□□ -1.2
LSM3P4-201ENST00000502948 FCGRTP55899 365 aa7.57□□□□□ -1.2
LSM3P4-201ENST00000502948 IRF5Q13568 498 aa7.57□□□□□ -1.2
LSM3P4-201ENST00000502948 SLC4A8Q2Y0W8 1093 aa7.57□□□□□ -1.2
LSM3P4-201ENST00000502948 PROCA1Q8NCQ7 364 aaPredicted RBP7.57□□□□□ -1.2
LSM3P4-201ENST00000502948 SLAIN1Q8ND83 568 aa7.57□□□□□ -1.2
LSM3P4-201ENST00000502948 ARHGAP39Q9C0H5 1083 aa7.57□□□□□ -1.2
LSM3P4-201ENST00000502948 OSBPL5Q9H0X9 879 aaPredicted RBP7.57□□□□□ -1.2
LSM3P4-201ENST00000502948 NOB1Q9ULX3 412 aaKnown RBP7.57□□□□□ -1.2
LSM3P4-201ENST00000502948 LRRFIP2Q9Y608 721 aaKnown RBP7.57□□□□□ -1.2
LSM3P4-201ENST00000502948 CDK5RAP2Q96SN8 1893 aa7.57□□□□□ -1.2
LSM3P4-201ENST00000502948 MROH7-TTC4A0A0A0MT08 1334 aa7.56□□□□□ -1.2
LSM3P4-201ENST00000502948 A0A1B0GUL7 405 aa7.56□□□□□ -1.2
LSM3P4-201ENST00000502948 A0A1W2PPC1 479 aa7.56□□□□□ -1.2
LSM3P4-201ENST00000502948 LDHCP07864 332 aa7.56□□□□□ -1.2
LSM3P4-201ENST00000502948 CTGFP29279 349 aa7.56□□□□□ -1.2
LSM3P4-201ENST00000502948 ARID4AP29374 1257 aaPredicted RBP7.56□□□□□ -1.2
LSM3P4-201ENST00000502948 RGS3P49796 1198 aa7.56□□□□□ -1.2
LSM3P4-201ENST00000502948 FXR1P51114 621 aaKnown RBP eCLIP7.56□□□□□ -1.2
LSM3P4-201ENST00000502948 RARSP54136 660 aaKnown RBP7.56□□□□□ -1.2
LSM3P4-201ENST00000502948 RHBDL3P58872 404 aa7.56□□□□□ -1.2
LSM3P4-201ENST00000502948 UBXN2AP68543 259 aa7.56□□□□□ -1.2
LSM3P4-201ENST00000502948 GSTO1P78417 241 aa7.56□□□□□ -1.2
LSM3P4-201ENST00000502948 TCP10Q12799 353 aa7.56□□□□□ -1.2
LSM3P4-201ENST00000502948 RASGRF1Q13972 1273 aa7.56□□□□□ -1.2
LSM3P4-201ENST00000502948 TMED8Q6PL24 325 aaPredicted RBP7.56□□□□□ -1.2
LSM3P4-201ENST00000502948 CDCA7LQ96GN5 454 aa7.56□□□□□ -1.2
LSM3P4-201ENST00000502948 ZNF512BQ96KM6 892 aaPredicted RBP7.56□□□□□ -1.2
LSM3P4-201ENST00000502948 HTATIP2Q9BUP3 242 aa7.56□□□□□ -1.2
LSM3P4-201ENST00000502948 GPR108Q9NPR9 543 aa7.56□□□□□ -1.2
LSM3P4-201ENST00000502948 PICK1Q9NRD5 415 aa7.56□□□□□ -1.2
LSM3P4-201ENST00000502948 GINM1Q9NU53 330 aa7.56□□□□□ -1.2
LSM3P4-201ENST00000502948 CPA4Q9UI42 421 aa7.56□□□□□ -1.2
LSM3P4-201ENST00000502948 HERC5Q9UII4 1024 aaKnown RBP7.56□□□□□ -1.2
LSM3P4-201ENST00000502948 ZHX2Q9Y6X8 837 aa7.56□□□□□ -1.2
LSM3P4-201ENST00000502948 DOCK3Q8IZD9 2030 aa7.56□□□□□ -1.2
LSM3P4-201ENST00000502948 MYPNQ86TC9 1320 aa7.55□□□□□ -1.2
LSM3P4-201ENST00000502948 DDTLA6NHG4 134 aaPredicted RBP7.55□□□□□ -1.2
LSM3P4-201ENST00000502948 IPO8O15397 1037 aaKnown RBP7.55□□□□□ -1.2
LSM3P4-201ENST00000502948 GCLCP48506 637 aaPredicted RBP7.55□□□□□ -1.2
LSM3P4-201ENST00000502948 FAM110CQ1W6H9 321 aa7.55□□□□□ -1.2
LSM3P4-201ENST00000502948 SH3D19Q5HYK7 790 aa7.55□□□□□ -1.2
LSM3P4-201ENST00000502948 ERICH6Q7L0X2 663 aa7.55□□□□□ -1.2
LSM3P4-201ENST00000502948 SH3BP5LQ7L8J4 393 aa7.55□□□□□ -1.2
LSM3P4-201ENST00000502948 METTL16Q86W50 562 aaKnown RBP7.55□□□□□ -1.2
LSM3P4-201ENST00000502948 DZIP1Q86YF9 867 aaKnown RBP7.55□□□□□ -1.2
LSM3P4-201ENST00000502948 ZFPM1Q8IX07 1006 aa7.55□□□□□ -1.2
LSM3P4-201ENST00000502948 RAET1EQ8TD07 263 aa7.55□□□□□ -1.2
LSM3P4-201ENST00000502948 SH3TC2Q8TF17 1288 aa7.55□□□□□ -1.2
LSM3P4-201ENST00000502948 NSUN4Q96CB9 384 aaKnown RBP7.55□□□□□ -1.2
LSM3P4-201ENST00000502948 SHISA4Q96DD7 197 aa7.55□□□□□ -1.2
LSM3P4-201ENST00000502948 XAGE2Q96GT9 111 aa7.55□□□□□ -1.2
LSM3P4-201ENST00000502948 MEIS3Q99687 375 aa7.55□□□□□ -1.2
LSM3P4-201ENST00000502948 SIL1Q9H173 461 aa7.55□□□□□ -1.2
LSM3P4-201ENST00000502948 DHX36Q9H2U1 1008 aaKnown RBP7.55□□□□□ -1.2
LSM3P4-201ENST00000502948 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.55□□□□□ -1.2
LSM3P4-201ENST00000502948 PNMA3Q9UL41 463 aa7.55□□□□□ -1.2
LSM3P4-201ENST00000502948 AGTPBP1Q9UPW5 1226 aa7.55□□□□□ -1.2
LSM3P4-201ENST00000502948 SIPA1L1O43166 1804 aa7.55□□□□□ -1.2
LSM3P4-201ENST00000502948 SRGAP3O43295 1099 aa7.54□□□□□ -1.2
LSM3P4-201ENST00000502948 FMNL1O95466 1100 aaPredicted RBP7.54□□□□□ -1.2
LSM3P4-201ENST00000502948 SGPL1O95470 568 aa7.54□□□□□ -1.2
LSM3P4-201ENST00000502948 UQCRFS1P1P0C7P4 283 aa7.54□□□□□ -1.2
LSM3P4-201ENST00000502948 ADORA1P30542 326 aa7.54□□□□□ -1.2
LSM3P4-201ENST00000502948 BTDP43251 543 aa7.54□□□□□ -1.2
LSM3P4-201ENST00000502948 PPP4CP60510 307 aa7.54□□□□□ -1.2
LSM3P4-201ENST00000502948 TIMM10P62072 90 aa7.54□□□□□ -1.2
LSM3P4-201ENST00000502948 MECOMQ03112 1051 aa7.54□□□□□ -1.2
LSM3P4-201ENST00000502948 PABPC4Q13310 644 aaKnown RBP eCLIP7.54□□□□□ -1.2
LSM3P4-201ENST00000502948 MTFR1Q15390 333 aa7.54□□□□□ -1.2
LSM3P4-201ENST00000502948 CERS3Q8IU89 383 aa7.54□□□□□ -1.2
LSM3P4-201ENST00000502948 ANKLE1Q8NAG6 615 aa7.54□□□□□ -1.2
LSM3P4-201ENST00000502948 SPATA5Q8NB90 893 aa7.54□□□□□ -1.2
LSM3P4-201ENST00000502948 CRISPLD2Q9H0B8 497 aa7.54□□□□□ -1.2
LSM3P4-201ENST00000502948 PRO3102Q9H379 93 aa7.54□□□□□ -1.2
LSM3P4-201ENST00000502948 DDX4Q9NQI0 724 aaKnown RBP7.54□□□□□ -1.2
LSM3P4-201ENST00000502948 PAK6Q9NQU5 681 aaPredicted RBP7.54□□□□□ -1.2
LSM3P4-201ENST00000502948 HMG20BQ9P0W2 317 aa7.54□□□□□ -1.2
LSM3P4-201ENST00000502948 PA2G4Q9UQ80 394 aaKnown RBP7.54□□□□□ -1.2
LSM3P4-201ENST00000502948 PLXNB2O15031 1838 aa7.53□□□□□ -1.2
LSM3P4-201ENST00000502948 GNAI2P04899 355 aa7.53□□□□□ -1.2
LSM3P4-201ENST00000502948 CYP2C8P10632 490 aa7.53□□□□□ -1.2
LSM3P4-201ENST00000502948 CCL5P13501 91 aa7.53□□□□□ -1.2
LSM3P4-201ENST00000502948 PLCG2P16885 1265 aa7.53□□□□□ -1.2
LSM3P4-201ENST00000502948 HOXA7P31268 230 aaPredicted RBP7.53□□□□□ -1.2
LSM3P4-201ENST00000502948 CAP2P40123 477 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms