RNA–Protein interactions for RNA: ENST00000502944.1

MATR3-204, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 362 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-204ENST00000502944 LARP1BQ659C4 914 aaKnown RBP8.39□□□□□ -1.07
MATR3-204ENST00000502944 ATL3Q6DD88 541 aa8.39□□□□□ -1.07
MATR3-204ENST00000502944 CAVIN1Q6NZI2 390 aaKnown RBP8.39□□□□□ -1.07
MATR3-204ENST00000502944 UNC5CLQ8IV45 518 aa8.39□□□□□ -1.07
MATR3-204ENST00000502944 KBTBD3Q8NAB2 608 aa8.39□□□□□ -1.07
MATR3-204ENST00000502944 NEK1Q96PY6 1258 aa8.39□□□□□ -1.07
MATR3-204ENST00000502944 ARXQ96QS3 562 aa8.39□□□□□ -1.07
MATR3-204ENST00000502944 INSM2Q96T92 566 aaPredicted RBP8.39□□□□□ -1.07
MATR3-204ENST00000502944 LLPHQ9BRT6 129 aaKnown RBP8.39□□□□□ -1.07
MATR3-204ENST00000502944 UPF3BQ9BZI7 483 aaKnown RBP8.39□□□□□ -1.07
MATR3-204ENST00000502944 SCAND2PQ9GZW5 306 aaPredicted RBP8.39□□□□□ -1.07
MATR3-204ENST00000502944 CFAP45Q9UL16 551 aa8.39□□□□□ -1.07
MATR3-204ENST00000502944 THRAP3Q9Y2W1 955 aaKnown RBP8.39□□□□□ -1.07
MATR3-204ENST00000502944 PRAMEF22A3QJZ6 481 aa8.38□□□□□ -1.07
MATR3-204ENST00000502944 ERVV-1B6SEH8 477 aa8.38□□□□□ -1.07
MATR3-204ENST00000502944 ATP5J2-PTCD1G3V325 749 aa8.38□□□□□ -1.07
MATR3-204ENST00000502944 PTCD1O75127 700 aaKnown RBP8.38□□□□□ -1.07
MATR3-204ENST00000502944 MYCP01106 439 aaPredicted RBP8.38□□□□□ -1.07
MATR3-204ENST00000502944 PCCAP05165 728 aaPredicted RBP8.38□□□□□ -1.07
MATR3-204ENST00000502944 IFIT1P09914 478 aaKnown RBP8.38□□□□□ -1.07
MATR3-204ENST00000502944 MSNP26038 577 aaKnown RBP8.38□□□□□ -1.07
MATR3-204ENST00000502944 SOX11P35716 441 aa8.38□□□□□ -1.07
MATR3-204ENST00000502944 PTGIRP43119 386 aa8.38□□□□□ -1.07
MATR3-204ENST00000502944 KRT85P78386 507 aa8.38□□□□□ -1.07
MATR3-204ENST00000502944 HMGN5P82970 282 aaKnown RBP8.38□□□□□ -1.07
MATR3-204ENST00000502944 TFCP2Q12800 502 aa8.38□□□□□ -1.07
MATR3-204ENST00000502944 NMIQ13287 307 aaPredicted RBP8.38□□□□□ -1.07
MATR3-204ENST00000502944 TTC39AQ5SRH9 613 aa8.38□□□□□ -1.07
MATR3-204ENST00000502944 LRSAM1Q6UWE0 723 aa8.38□□□□□ -1.07
MATR3-204ENST00000502944 ZGPATQ8N5A5 531 aaKnown RBP8.38□□□□□ -1.07
MATR3-204ENST00000502944 ZBTB38Q8NAP3 1195 aaPredicted RBP8.38□□□□□ -1.07
MATR3-204ENST00000502944 TTC14Q96N46 770 aa8.38□□□□□ -1.07
MATR3-204ENST00000502944 DSCC1Q9BVC3 393 aa8.38□□□□□ -1.07
MATR3-204ENST00000502944 PLA2G12BQ9BX93 195 aa8.38□□□□□ -1.07
MATR3-204ENST00000502944 ZSCAN16Q9H4T2 348 aaPredicted RBP8.38□□□□□ -1.07
MATR3-204ENST00000502944 ANKRD18BA2A2Z9 1011 aa8.37□□□□□ -1.07
MATR3-204ENST00000502944 H3BQV1 296 aa8.37□□□□□ -1.07
MATR3-204ENST00000502944 SLC27A2O14975 620 aa8.37□□□□□ -1.07
MATR3-204ENST00000502944 SPINT1O43278 529 aa8.37□□□□□ -1.07
MATR3-204ENST00000502944 TPM3P06753 285 aa8.37□□□□□ -1.07
MATR3-204ENST00000502944 UQCRFS1P1P0C7P4 283 aa8.37□□□□□ -1.07
MATR3-204ENST00000502944 RPS6KB1P23443 525 aa8.37□□□□□ -1.07
MATR3-204ENST00000502944 MCM5P33992 734 aa8.37□□□□□ -1.07
MATR3-204ENST00000502944 SCTRP47872 440 aa8.37□□□□□ -1.07
MATR3-204ENST00000502944 TRDNQ13061 729 aa8.37□□□□□ -1.07
MATR3-204ENST00000502944 ZSCAN23Q3MJ62 389 aa8.37□□□□□ -1.07
MATR3-204ENST00000502944 TMEM87AQ8NBN3 555 aa8.37□□□□□ -1.07
MATR3-204ENST00000502944 RGS22Q8NE09 1264 aa8.37□□□□□ -1.07
MATR3-204ENST00000502944 DDX17Q92841 729 aaKnown RBP8.37□□□□□ -1.07
MATR3-204ENST00000502944 KAZALD1Q96I82 304 aa8.37□□□□□ -1.07
MATR3-204ENST00000502944 CCDC85AQ96PX6 553 aaPredicted RBP8.37□□□□□ -1.07
MATR3-204ENST00000502944 ISCA1Q9BUE6 129 aa8.37□□□□□ -1.07
MATR3-204ENST00000502944 TSPY26PQ9H489 355 aa8.37□□□□□ -1.07
MATR3-204ENST00000502944 PAG1Q9NWQ8 432 aa8.37□□□□□ -1.07
MATR3-204ENST00000502944 BRPF3Q9ULD4 1205 aa8.37□□□□□ -1.07
MATR3-204ENST00000502944 PALD1Q9ULE6 856 aa8.37□□□□□ -1.07
MATR3-204ENST00000502944 DOLKQ9UPQ8 538 aa8.37□□□□□ -1.07
MATR3-204ENST00000502944 KDM6AO15550 1401 aaPredicted RBP8.37□□□□□ -1.07
MATR3-204ENST00000502944 FAM208AQ9UK61 1670 aaKnown RBP8.37□□□□□ -1.07
MATR3-204ENST00000502944 ABCC12Q96J65 1359 aa8.36□□□□□ -1.07
MATR3-204ENST00000502944 KDM3BQ7LBC6 1761 aa8.36□□□□□ -1.07
MATR3-204ENST00000502944 MEN1O00255 615 aa8.36□□□□□ -1.07
MATR3-204ENST00000502944 RNF113AO15541 343 aaKnown RBP8.36□□□□□ -1.07
MATR3-204ENST00000502944 TAF5LO75529 589 aa8.36□□□□□ -1.07
MATR3-204ENST00000502944 CAVIN2O95810 425 aa8.36□□□□□ -1.07
MATR3-204ENST00000502944 GJB2P29033 226 aa8.36□□□□□ -1.07
MATR3-204ENST00000502944 CTSOP43234 321 aaPredicted RBP8.36□□□□□ -1.07
MATR3-204ENST00000502944 RFX5P48382 616 aaPredicted RBP8.36□□□□□ -1.07
MATR3-204ENST00000502944 HSPA2P54652 639 aa8.36□□□□□ -1.07
MATR3-204ENST00000502944 ERVK-9P63128 1117 aa8.36□□□□□ -1.07
MATR3-204ENST00000502944 FOXO4P98177 505 aa8.36□□□□□ -1.07
MATR3-204ENST00000502944 IMMTQ16891 758 aaKnown RBP8.36□□□□□ -1.07
MATR3-204ENST00000502944 OXLD1Q5BKU9 147 aa8.36□□□□□ -1.07
MATR3-204ENST00000502944 CCDC183Q5T5S1 534 aa8.36□□□□□ -1.07
MATR3-204ENST00000502944 USPL1Q5W0Q7 1092 aa8.36□□□□□ -1.07
MATR3-204ENST00000502944 CPLX2Q6PUV4 134 aaKnown RBP8.36□□□□□ -1.07
MATR3-204ENST00000502944 NOL8Q76FK4 1167 aaKnown RBP8.36□□□□□ -1.07
MATR3-204ENST00000502944 DHX32Q7L7V1 743 aaKnown RBP8.36□□□□□ -1.07
MATR3-204ENST00000502944 SMARCC1Q92922 1105 aaPredicted RBP8.36□□□□□ -1.07
MATR3-204ENST00000502944 DNAJC2Q99543 621 aaKnown RBP8.36□□□□□ -1.07
MATR3-204ENST00000502944 SH3TC1Q8TE82 1336 aa8.35□□□□□ -1.07
MATR3-204ENST00000502944 TRPM3Q9HCF6 1732 aaPredicted RBP8.35□□□□□ -1.07
MATR3-204ENST00000502944 PXDNQ92626 1479 aa8.35□□□□□ -1.07
MATR3-204ENST00000502944 F13A1P00488 732 aa8.35□□□□□ -1.07
MATR3-204ENST00000502944 A1BGP04217 495 aa8.35□□□□□ -1.07
MATR3-204ENST00000502944 SYT1P21579 422 aa8.35□□□□□ -1.07
MATR3-204ENST00000502944 IL6STP40189 918 aaPredicted RBP8.35□□□□□ -1.07
MATR3-204ENST00000502944 VEGFBP49765 207 aa8.35□□□□□ -1.07
MATR3-204ENST00000502944 USP4Q13107 963 aa8.35□□□□□ -1.07
MATR3-204ENST00000502944 LRP10Q7Z4F1 713 aa8.35□□□□□ -1.07
MATR3-204ENST00000502944 USP48Q86UV5 1035 aa8.35□□□□□ -1.07
MATR3-204ENST00000502944 ZNF396Q96N95 335 aaPredicted RBP8.35□□□□□ -1.07
MATR3-204ENST00000502944 PPP1R9BQ96SB3 815 aa8.35□□□□□ -1.07
MATR3-204ENST00000502944 CNNM1Q9NRU3 951 aa8.35□□□□□ -1.07
MATR3-204ENST00000502944 BTG4Q9NY30 223 aa8.35□□□□□ -1.07
MATR3-204ENST00000502944 NXF1Q9UBU9 619 aaKnown RBP8.35□□□□□ -1.07
MATR3-204ENST00000502944 CCDC39Q9UFE4 941 aa8.35□□□□□ -1.07
MATR3-204ENST00000502944 DNMT3LQ9UJW3 386 aa8.35□□□□□ -1.07
MATR3-204ENST00000502944 ZNF652Q9Y2D9 606 aa8.35□□□□□ -1.07
MATR3-204ENST00000502944 MARF1Q9Y4F3 1742 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms