RNA–Protein interactions for RNA: ENST00000502221.2

AC055717.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC055717.1, Length 1,986 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.1-201ENST00000502221 TUBE1Q9UJT0 475 aa12.62□□□□□ -0.39
AC055717.1-201ENST00000502221 MRC1P22897 1456 aa12.62□□□□□ -0.39
AC055717.1-201ENST00000502221 MYH14Q7Z406 1995 aaKnown RBP12.62□□□□□ -0.39
AC055717.1-201ENST00000502221 LOC102724428A0A0B4J2F2 783 aa12.61□□□□□ -0.39
AC055717.1-201ENST00000502221 RNMTO43148 476 aaKnown RBP12.61□□□□□ -0.39
AC055717.1-201ENST00000502221 SIK1P57059 783 aa12.61□□□□□ -0.39
AC055717.1-201ENST00000502221 CORO7P57737 925 aa12.61□□□□□ -0.39
AC055717.1-201ENST00000502221 CEBPZQ03701 1054 aaKnown RBP12.61□□□□□ -0.39
AC055717.1-201ENST00000502221 SWT1Q5T5J6 900 aaKnown RBP12.61□□□□□ -0.39
AC055717.1-201ENST00000502221 JMYQ8N9B5 988 aa12.61□□□□□ -0.39
AC055717.1-201ENST00000502221 CTCFLQ8NI51 663 aaPredicted RBP12.61□□□□□ -0.39
AC055717.1-201ENST00000502221 PHAXQ9H814 394 aaKnown RBP12.61□□□□□ -0.39
AC055717.1-201ENST00000502221 VIPAS39Q9H9C1 493 aa12.61□□□□□ -0.39
AC055717.1-201ENST00000502221 TMOD3Q9NYL9 352 aa12.61□□□□□ -0.39
AC055717.1-201ENST00000502221 HOOK1Q9UJC3 728 aaKnown RBP12.61□□□□□ -0.39
AC055717.1-201ENST00000502221 GOLGB1Q14789 3259 aaKnown RBP12.61□□□□□ -0.39
AC055717.1-201ENST00000502221 PI4KAP2A4QPH2 592 aa12.61□□□□□ -0.39
AC055717.1-201ENST00000502221 SPTLC2O15270 562 aa12.61□□□□□ -0.39
AC055717.1-201ENST00000502221 ZNF202O95125 648 aa12.61□□□□□ -0.39
AC055717.1-201ENST00000502221 ATP5JP18859 108 aa12.61□□□□□ -0.39
AC055717.1-201ENST00000502221 USP8P40818 1118 aa12.61□□□□□ -0.39
AC055717.1-201ENST00000502221 MMP14P50281 582 aa12.61□□□□□ -0.39
AC055717.1-201ENST00000502221 CFAP100Q494V2 611 aa12.61□□□□□ -0.39
AC055717.1-201ENST00000502221 MCMDC2Q4G0Z9 681 aa12.61□□□□□ -0.39
AC055717.1-201ENST00000502221 PI4KAP1Q8N8J0 262 aa12.61□□□□□ -0.39
AC055717.1-201ENST00000502221 SMARCC1Q92922 1105 aaPredicted RBP12.61□□□□□ -0.39
AC055717.1-201ENST00000502221 SLC4A9Q96Q91 983 aa12.61□□□□□ -0.39
AC055717.1-201ENST00000502221 DBF4Q9UBU7 674 aaPredicted RBP12.61□□□□□ -0.39
AC055717.1-201ENST00000502221 DACH1Q9UI36 760 aa12.61□□□□□ -0.39
AC055717.1-201ENST00000502221 ZNF831Q5JPB2 1677 aa12.6□□□□□ -0.39
AC055717.1-201ENST00000502221 C4AP0C0L4 1744 aa12.6□□□□□ -0.39
AC055717.1-201ENST00000502221 NDUFA8P51970 172 aa12.6□□□□□ -0.39
AC055717.1-201ENST00000502221 EIF5P55010 431 aaKnown RBP12.6□□□□□ -0.39
AC055717.1-201ENST00000502221 CHMP4BP1P59074 171 aa12.6□□□□□ -0.39
AC055717.1-201ENST00000502221 CT47A1Q5JQC4 288 aaPredicted RBP12.6□□□□□ -0.39
AC055717.1-201ENST00000502221 SYNE3Q6ZMZ3 975 aa12.6□□□□□ -0.39
AC055717.1-201ENST00000502221 CCDC91Q7Z6B0 441 aa12.6□□□□□ -0.39
AC055717.1-201ENST00000502221 ZCCHC17Q9NP64 241 aaKnown RBP12.6□□□□□ -0.39
AC055717.1-201ENST00000502221 TJP1Q07157 1748 aa12.6□□□□□ -0.39
AC055717.1-201ENST00000502221 ATP2B1P20020 1258 aa12.6□□□□□ -0.39
AC055717.1-201ENST00000502221 TBX2Q13207 712 aaPredicted RBP12.6□□□□□ -0.39
AC055717.1-201ENST00000502221 BEND6Q5SZJ8 279 aaPredicted RBP12.6□□□□□ -0.39
AC055717.1-201ENST00000502221 NECTIN2Q92692 538 aa12.6□□□□□ -0.39
AC055717.1-201ENST00000502221 KIFC2Q96AC6 838 aa12.6□□□□□ -0.39
AC055717.1-201ENST00000502221 CCDC34Q96HJ3 373 aa12.6□□□□□ -0.39
AC055717.1-201ENST00000502221 DCAF5Q96JK2 942 aa12.6□□□□□ -0.39
AC055717.1-201ENST00000502221 CEP89Q96ST8 783 aa12.6□□□□□ -0.39
AC055717.1-201ENST00000502221 CEMIPQ8WUJ3 1361 aa12.59□□□□□ -0.39
AC055717.1-201ENST00000502221 A0A087WUV0 522 aaPredicted RBP12.59□□□□□ -0.39
AC055717.1-201ENST00000502221 FAM237AA0A1B0GTK4 181 aa12.59□□□□□ -0.39
AC055717.1-201ENST00000502221 TRIM66O15016 1216 aa12.59□□□□□ -0.39
AC055717.1-201ENST00000502221 CCDC175P0C221 793 aa12.59□□□□□ -0.39
AC055717.1-201ENST00000502221 EIF4A1P60842 406 aaKnown RBP12.59□□□□□ -0.39
AC055717.1-201ENST00000502221 KSR2Q6VAB6 950 aa12.59□□□□□ -0.39
AC055717.1-201ENST00000502221 EAF2Q96CJ1 260 aaPredicted RBP12.59□□□□□ -0.39
AC055717.1-201ENST00000502221 TCEANC2Q96MN5 208 aa12.59□□□□□ -0.39
AC055717.1-201ENST00000502221 TACO1Q9BSH4 297 aaKnown RBP12.59□□□□□ -0.39
AC055717.1-201ENST00000502221 DSCC1Q9BVC3 393 aa12.59□□□□□ -0.39
AC055717.1-201ENST00000502221 CDC23Q9UJX2 597 aa12.59□□□□□ -0.39
AC055717.1-201ENST00000502221 MAP3K15Q6ZN16 1313 aa12.59□□□□□ -0.39
AC055717.1-201ENST00000502221 SH3TC1Q8TE82 1336 aa12.59□□□□□ -0.39
AC055717.1-201ENST00000502221 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.58□□□□□ -0.4
AC055717.1-201ENST00000502221 A0A1B0GVL5 298 aa12.58□□□□□ -0.4
AC055717.1-201ENST00000502221 EIF3CLB5ME19 914 aaKnown RBP12.58□□□□□ -0.4
AC055717.1-201ENST00000502221 CUTAO60888 179 aa12.58□□□□□ -0.4
AC055717.1-201ENST00000502221 PPFIA4O75335 1185 aa12.58□□□□□ -0.4
AC055717.1-201ENST00000502221 DDX58O95786 925 aaKnown RBP12.58□□□□□ -0.4
AC055717.1-201ENST00000502221 EXOSC10Q01780 885 aaKnown RBP12.58□□□□□ -0.4
AC055717.1-201ENST00000502221 GPR162Q16538 588 aa12.58□□□□□ -0.4
AC055717.1-201ENST00000502221 TMEM139Q8IV31 216 aa12.58□□□□□ -0.4
AC055717.1-201ENST00000502221 ZNF784Q8NCA9 323 aaPredicted RBP12.58□□□□□ -0.4
AC055717.1-201ENST00000502221 LINS1Q8NG48 757 aa12.58□□□□□ -0.4
AC055717.1-201ENST00000502221 EIF3CQ99613 913 aaKnown RBP12.58□□□□□ -0.4
AC055717.1-201ENST00000502221 HELLSQ9NRZ9 838 aa12.58□□□□□ -0.4
AC055717.1-201ENST00000502221 VPS18Q9P253 973 aa12.58□□□□□ -0.4
AC055717.1-201ENST00000502221 MYO1AQ9UBC5 1043 aa12.58□□□□□ -0.4
AC055717.1-201ENST00000502221 L1RE1Q9UN81 338 aa12.58□□□□□ -0.4
AC055717.1-201ENST00000502221 KIAA1551Q9HCM1 1747 aa12.58□□□□□ -0.4
AC055717.1-201ENST00000502221 CARMIL3Q8ND23 1372 aa12.58□□□□□ -0.4
AC055717.1-201ENST00000502221 A6NNZ2 444 aa12.58□□□□□ -0.4
AC055717.1-201ENST00000502221 KIF5CO60282 957 aa12.58□□□□□ -0.4
AC055717.1-201ENST00000502221 PPP6R2O75170 966 aa12.58□□□□□ -0.4
AC055717.1-201ENST00000502221 SASH1O94885 1247 aa12.58□□□□□ -0.4
AC055717.1-201ENST00000502221 YBX3P16989 372 aaKnown RBP eCLIP12.58□□□□□ -0.4
AC055717.1-201ENST00000502221 LMOD1P29536 600 aaPredicted RBP12.58□□□□□ -0.4
AC055717.1-201ENST00000502221 ATP6V1AP38606 617 aa12.58□□□□□ -0.4
AC055717.1-201ENST00000502221 TUBB8Q3ZCM7 444 aa12.58□□□□□ -0.4
AC055717.1-201ENST00000502221 DNAJC21Q5F1R6 531 aaKnown RBP12.58□□□□□ -0.4
AC055717.1-201ENST00000502221 SPECC1LQ69YQ0 1117 aa12.58□□□□□ -0.4
AC055717.1-201ENST00000502221 PANX2Q96RD6 677 aa12.58□□□□□ -0.4
AC055717.1-201ENST00000502221 BOLA2Q9H3K6 86 aa12.58□□□□□ -0.4
AC055717.1-201ENST00000502221 LCMT1Q9UIC8 334 aa12.58□□□□□ -0.4
AC055717.1-201ENST00000502221 KCNQ3O43525 872 aa12.57□□□□□ -0.4
AC055717.1-201ENST00000502221 CTDNEP1O95476 244 aa12.57□□□□□ -0.4
AC055717.1-201ENST00000502221 CABP4P57796 275 aa12.57□□□□□ -0.4
AC055717.1-201ENST00000502221 TEFQ10587 303 aa12.57□□□□□ -0.4
AC055717.1-201ENST00000502221 WHAMMP3Q1A5X7 153 aa12.57□□□□□ -0.4
AC055717.1-201ENST00000502221 MAP9Q49MG5 647 aa12.57□□□□□ -0.4
AC055717.1-201ENST00000502221 MMS22LQ6ZRQ5 1243 aa12.57□□□□□ -0.4
AC055717.1-201ENST00000502221 H3BQF6 201 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms