RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 FAM198AQ9UFP1 575 aa19.49■□□□□ 0.71
LMNA-217ENST00000498722 TTC41PQ6P2S7 1318 aa19.48■□□□□ 0.71
LMNA-217ENST00000498722 RPAP1Q9BWH6 1393 aaPredicted RBP19.48■□□□□ 0.71
LMNA-217ENST00000498722 PDE6AP16499 860 aa19.48■□□□□ 0.71
LMNA-217ENST00000498722 IREB2P48200 963 aaKnown RBP19.48■□□□□ 0.71
LMNA-217ENST00000498722 HOOK2Q96ED9 719 aa19.48■□□□□ 0.71
LMNA-217ENST00000498722 IDI2Q9BXS1 227 aa19.48■□□□□ 0.71
LMNA-217ENST00000498722 UPF2Q9HAU5 1272 aaKnown RBP19.48■□□□□ 0.71
LMNA-217ENST00000498722 ENTPD3O75355 529 aa19.47■□□□□ 0.71
LMNA-217ENST00000498722 WDHD1O75717 1129 aaPredicted RBP19.47■□□□□ 0.71
LMNA-217ENST00000498722 MAP4K4O95819 1239 aaPredicted RBP19.47■□□□□ 0.71
LMNA-217ENST00000498722 RHBDL3P58872 404 aa19.47■□□□□ 0.71
LMNA-217ENST00000498722 DDX4Q9NQI0 724 aaKnown RBP19.47■□□□□ 0.71
LMNA-217ENST00000498722 THSD7BQ9C0I4 1608 aa19.46■□□□□ 0.71
LMNA-217ENST00000498722 BAZ2AQ9UIF9 1905 aaKnown RBP19.46■□□□□ 0.71
LMNA-217ENST00000498722 AOC2O75106 756 aa19.46■□□□□ 0.71
LMNA-217ENST00000498722 GLRX3O76003 335 aaKnown RBP19.46■□□□□ 0.71
LMNA-217ENST00000498722 DYNLL1P63167 89 aaKnown RBP19.46■□□□□ 0.71
LMNA-217ENST00000498722 IFFO2Q5TF58 517 aa19.46■□□□□ 0.71
LMNA-217ENST00000498722 DCAF15Q66K64 600 aa19.46■□□□□ 0.71
LMNA-217ENST00000498722 MIGA2Q7L4E1 593 aa19.46■□□□□ 0.71
LMNA-217ENST00000498722 ZFPM1Q8IX07 1006 aa19.46■□□□□ 0.71
LMNA-217ENST00000498722 CCDC102AQ96A19 550 aa19.46■□□□□ 0.71
LMNA-217ENST00000498722 SALL3Q9BXA9 1300 aa19.45■□□□□ 0.7
LMNA-217ENST00000498722 ZNF532Q9HCE3 1301 aa19.45■□□□□ 0.7
LMNA-217ENST00000498722 RFX7Q2KHR2 1363 aa19.45■□□□□ 0.7
LMNA-217ENST00000498722 ATAD5Q96QE3 1844 aa19.45■□□□□ 0.7
LMNA-217ENST00000498722 MAGEB6P1A0A0J9YX57 407 aa19.45■□□□□ 0.7
LMNA-217ENST00000498722 USP2O75604 605 aaPredicted RBP19.45■□□□□ 0.7
LMNA-217ENST00000498722 PDE1AP54750 535 aa19.45■□□□□ 0.7
LMNA-217ENST00000498722 TMED8Q6PL24 325 aaPredicted RBP19.45■□□□□ 0.7
LMNA-217ENST00000498722 TGFBRAP1Q8WUH2 860 aa19.45■□□□□ 0.7
LMNA-217ENST00000498722 CSRNP1Q96S65 589 aa19.45■□□□□ 0.7
LMNA-217ENST00000498722 MYH8P13535 1937 aa19.45■□□□□ 0.7
LMNA-217ENST00000498722 PCNTO95613 3336 aa19.44■□□□□ 0.7
LMNA-217ENST00000498722 PPP4CP60510 307 aa19.44■□□□□ 0.7
LMNA-217ENST00000498722 ZSCAN25Q6NSZ9 544 aa19.44■□□□□ 0.7
LMNA-217ENST00000498722 CERS3Q8IU89 383 aa19.44■□□□□ 0.7
LMNA-217ENST00000498722 JMYQ8N9B5 988 aa19.44■□□□□ 0.7
LMNA-217ENST00000498722 STAP2Q9UGK3 403 aa19.44■□□□□ 0.7
LMNA-217ENST00000498722 USP5P45974 858 aa19.43■□□□□ 0.7
LMNA-217ENST00000498722 MKRN3Q13064 507 aaKnown RBP19.43■□□□□ 0.7
LMNA-217ENST00000498722 NOGQ13253 232 aa19.43■□□□□ 0.7
LMNA-217ENST00000498722 MAP3K11Q16584 847 aa19.43■□□□□ 0.7
LMNA-217ENST00000498722 RASAL3Q86YV0 1011 aa19.43■□□□□ 0.7
LMNA-217ENST00000498722 MAPKAPK5Q8IW41 473 aa19.43■□□□□ 0.7
LMNA-217ENST00000498722 ANKRD13AQ8IZ07 590 aa19.43■□□□□ 0.7
LMNA-217ENST00000498722 PI4K2BQ8TCG2 481 aa19.43■□□□□ 0.7
LMNA-217ENST00000498722 SLC10A4Q96EP9 437 aa19.43■□□□□ 0.7
LMNA-217ENST00000498722 CLMNQ96JQ2 1002 aa19.43■□□□□ 0.7
LMNA-217ENST00000498722 DDTLA6NHG4 134 aaPredicted RBP19.42■□□□□ 0.7
LMNA-217ENST00000498722 CDC45O75419 566 aa19.42■□□□□ 0.7
LMNA-217ENST00000498722 SLC10A3P09131 477 aa19.42■□□□□ 0.7
LMNA-217ENST00000498722 GSPT1P15170 499 aaKnown RBP19.42■□□□□ 0.7
LMNA-217ENST00000498722 ADD2P35612 726 aa19.42■□□□□ 0.7
LMNA-217ENST00000498722 SLFNL1Q499Z3 407 aa19.42■□□□□ 0.7
LMNA-217ENST00000498722 LDLRAD1Q5T700 205 aa19.42■□□□□ 0.7
LMNA-217ENST00000498722 WRNIP1Q96S55 665 aa19.42■□□□□ 0.7
LMNA-217ENST00000498722 ZNF341Q9BYN7 854 aa19.42■□□□□ 0.7
LMNA-217ENST00000498722 OSBPL5Q9H0X9 879 aaPredicted RBP19.42■□□□□ 0.7
LMNA-217ENST00000498722 CSADQ9Y600 493 aa19.42■□□□□ 0.7
LMNA-217ENST00000498722 SIPA1L1O43166 1804 aa19.42■□□□□ 0.7
LMNA-217ENST00000498722 DOCK1Q14185 1865 aa19.41■□□□□ 0.7
LMNA-217ENST00000498722 KBTBD3Q8NAB2 608 aa19.41■□□□□ 0.7
LMNA-217ENST00000498722 FSD1Q9BTV5 496 aa19.41■□□□□ 0.7
LMNA-217ENST00000498722 FLT1P17948 1338 aa19.41■□□□□ 0.7
LMNA-217ENST00000498722 TCRBV5S4A2TA0A5A2 114 aa19.4■□□□□ 0.7
LMNA-217ENST00000498722 FAM155AB1AL88 458 aaPredicted RBP19.4■□□□□ 0.7
LMNA-217ENST00000498722 NPM3O75607 178 aaKnown RBP19.4■□□□□ 0.7
LMNA-217ENST00000498722 MAP2K2P36507 400 aa19.4■□□□□ 0.7
LMNA-217ENST00000498722 SLC4A8Q2Y0W8 1093 aa19.4■□□□□ 0.7
LMNA-217ENST00000498722 CASC1Q6TDU7 716 aa19.4■□□□□ 0.7
LMNA-217ENST00000498722 SH3BP5LQ7L8J4 393 aa19.4■□□□□ 0.7
LMNA-217ENST00000498722 BEGAINQ9BUH8 593 aa19.4■□□□□ 0.7
LMNA-217ENST00000498722 CRNKL1Q9BZJ0 848 aaKnown RBP19.4■□□□□ 0.7
LMNA-217ENST00000498722 ELP3Q9H9T3 547 aa19.4■□□□□ 0.7
LMNA-217ENST00000498722 SAP30BPQ9UHR5 308 aaKnown RBP19.4■□□□□ 0.7
LMNA-217ENST00000498722 MBD4O95243 580 aa19.39■□□□□ 0.69
LMNA-217ENST00000498722 CHGBP05060 677 aa19.39■□□□□ 0.69
LMNA-217ENST00000498722 MAP3K9P80192 1104 aa19.39■□□□□ 0.69
LMNA-217ENST00000498722 VGLL4Q14135 290 aa19.39■□□□□ 0.69
LMNA-217ENST00000498722 UBE3CQ15386 1083 aa19.39■□□□□ 0.69
LMNA-217ENST00000498722 LRRFIP1Q32MZ4 808 aaKnown RBP19.39■□□□□ 0.69
LMNA-217ENST00000498722 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.39■□□□□ 0.69
LMNA-217ENST00000498722 AIDAQ96BJ3 306 aa19.39■□□□□ 0.69
LMNA-217ENST00000498722 DDRGK1Q96HY6 314 aa19.39■□□□□ 0.69
LMNA-217ENST00000498722 ZIC5Q96T25 663 aa19.39■□□□□ 0.69
LMNA-217ENST00000498722 RIOK1Q9BRS2 568 aaKnown RBP19.39■□□□□ 0.69
LMNA-217ENST00000498722 ARMT1Q9H993 441 aa19.39■□□□□ 0.69
LMNA-217ENST00000498722 COL2A1P02458 1487 aaPredicted RBP19.39■□□□□ 0.69
LMNA-217ENST00000498722 DDX60LQ5H9U9 1706 aaKnown RBP19.39■□□□□ 0.69
LMNA-217ENST00000498722 LAMB1P07942 1786 aa19.39■□□□□ 0.69
LMNA-217ENST00000498722 ATRNL1Q5VV63 1379 aa19.38■□□□□ 0.69
LMNA-217ENST00000498722 KIF23Q02241 960 aaPredicted RBP19.38■□□□□ 0.69
LMNA-217ENST00000498722 MAP2K1Q02750 393 aaPredicted RBP19.38■□□□□ 0.69
LMNA-217ENST00000498722 LCORLQ8N3X6 602 aa19.38■□□□□ 0.69
LMNA-217ENST00000498722 ZKSCAN4Q969J2 545 aaPredicted RBP19.38■□□□□ 0.69
LMNA-217ENST00000498722 TRIM34Q9BYJ4 488 aa19.38■□□□□ 0.69
LMNA-217ENST00000498722 PALD1Q9ULE6 856 aa19.38■□□□□ 0.69
LMNA-217ENST00000498722 UNCXA6NJT0 531 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms