RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 ANKRD13AQ8IZ07 590 aa6.55□□□□□ -1.36
CSTF1-207ENST00000498689 TTC5Q8N0Z6 440 aa6.55□□□□□ -1.36
CSTF1-207ENST00000498689 HELBQ8NG08 1087 aaPredicted RBP6.55□□□□□ -1.36
CSTF1-207ENST00000498689 ALG13Q9NP73 1137 aaKnown RBP6.55□□□□□ -1.36
CSTF1-207ENST00000498689 HCSTQ9UBK5 93 aa6.55□□□□□ -1.36
CSTF1-207ENST00000498689 NSFL1CQ9UNZ2 370 aaKnown RBP6.55□□□□□ -1.36
CSTF1-207ENST00000498689 CEMIPQ8WUJ3 1361 aa6.55□□□□□ -1.36
CSTF1-207ENST00000498689 AOX1Q06278 1338 aa6.54□□□□□ -1.36
CSTF1-207ENST00000498689 PSEN2P49810 448 aa6.54□□□□□ -1.36
CSTF1-207ENST00000498689 PTPN5P54829 565 aa6.54□□□□□ -1.36
CSTF1-207ENST00000498689 FCGRTP55899 365 aa6.54□□□□□ -1.36
CSTF1-207ENST00000498689 DMRTA1Q5VZB9 504 aa6.54□□□□□ -1.36
CSTF1-207ENST00000498689 SH3RF1Q7Z6J0 888 aa6.54□□□□□ -1.36
CSTF1-207ENST00000498689 APOBEC3FQ8IUX4 373 aaKnown RBP6.54□□□□□ -1.36
CSTF1-207ENST00000498689 NECTIN2Q92692 538 aa6.54□□□□□ -1.36
CSTF1-207ENST00000498689 TEX13AQ9BXU3 409 aaPredicted RBP6.54□□□□□ -1.36
CSTF1-207ENST00000498689 POLKQ9UBT6 870 aa6.54□□□□□ -1.36
CSTF1-207ENST00000498689 PCDHAC2Q9Y5I4 1007 aa6.54□□□□□ -1.36
CSTF1-207ENST00000498689 TENM4Q6N022 2769 aa6.54□□□□□ -1.36
CSTF1-207ENST00000498689 UNCXA6NJT0 531 aa6.53□□□□□ -1.36
CSTF1-207ENST00000498689 IREB2P48200 963 aaKnown RBP6.53□□□□□ -1.36
CSTF1-207ENST00000498689 VGLL4Q14135 290 aa6.53□□□□□ -1.36
CSTF1-207ENST00000498689 ZNF790Q6PG37 636 aa6.53□□□□□ -1.36
CSTF1-207ENST00000498689 LURAP1LQ8IV03 231 aa6.53□□□□□ -1.36
CSTF1-207ENST00000498689 PLPP6Q8IY26 295 aa6.53□□□□□ -1.36
CSTF1-207ENST00000498689 NLRP3Q96P20 1036 aa6.53□□□□□ -1.36
CSTF1-207ENST00000498689 PBX4Q9BYU1 374 aa6.53□□□□□ -1.36
CSTF1-207ENST00000498689 IBTKQ9P2D0 1353 aaPredicted RBP6.53□□□□□ -1.36
CSTF1-207ENST00000498689 PHIPQ8WWQ0 1821 aa6.53□□□□□ -1.36
CSTF1-207ENST00000498689 ITPR1Q14643 2758 aa6.52□□□□□ -1.37
CSTF1-207ENST00000498689 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.52□□□□□ -1.37
CSTF1-207ENST00000498689 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.52□□□□□ -1.37
CSTF1-207ENST00000498689 BCRP11274 1271 aa6.52□□□□□ -1.37
CSTF1-207ENST00000498689 IRF5Q13568 498 aa6.52□□□□□ -1.37
CSTF1-207ENST00000498689 GRAPQ13588 217 aa6.52□□□□□ -1.37
CSTF1-207ENST00000498689 KRT40Q6A162 431 aa6.52□□□□□ -1.37
CSTF1-207ENST00000498689 RIC3Q7Z5B4 369 aa6.52□□□□□ -1.37
CSTF1-207ENST00000498689 GJD3Q8N144 294 aa6.52□□□□□ -1.37
CSTF1-207ENST00000498689 TBC1D16Q8TBP0 767 aa6.52□□□□□ -1.37
CSTF1-207ENST00000498689 GRAPLQ8TC17 118 aaPredicted RBP6.52□□□□□ -1.37
CSTF1-207ENST00000498689 RMDN1Q96DB5 314 aa6.52□□□□□ -1.37
CSTF1-207ENST00000498689 ZBED3Q96IU2 234 aaPredicted RBP6.52□□□□□ -1.37
CSTF1-207ENST00000498689 SENP6Q9GZR1 1112 aaPredicted RBP6.52□□□□□ -1.37
CSTF1-207ENST00000498689 HMX1Q9NP08 348 aaPredicted RBP6.52□□□□□ -1.37
CSTF1-207ENST00000498689 PRDM5Q9NQX1 630 aaPredicted RBP6.52□□□□□ -1.37
CSTF1-207ENST00000498689 ROCK2O75116 1388 aaKnown RBP6.52□□□□□ -1.37
CSTF1-207ENST00000498689 TRIM43BA6NCK2 446 aa6.51□□□□□ -1.37
CSTF1-207ENST00000498689 PRR23AA6NEV1 266 aa6.51□□□□□ -1.37
CSTF1-207ENST00000498689 PDHXO00330 501 aa6.51□□□□□ -1.37
CSTF1-207ENST00000498689 IRF6O14896 467 aa6.51□□□□□ -1.37
CSTF1-207ENST00000498689 WDHD1O75717 1129 aaPredicted RBP6.51□□□□□ -1.37
CSTF1-207ENST00000498689 ALADP13716 330 aa6.51□□□□□ -1.37
CSTF1-207ENST00000498689 HCLS1P14317 486 aaPredicted RBP6.51□□□□□ -1.37
CSTF1-207ENST00000498689 RTP1P59025 263 aa6.51□□□□□ -1.37
CSTF1-207ENST00000498689 PPP4R3BQ5MIZ7 849 aa6.51□□□□□ -1.37
CSTF1-207ENST00000498689 DGLUCYQ7Z3D6 616 aa6.51□□□□□ -1.37
CSTF1-207ENST00000498689 TRIM43Q96BQ3 446 aaPredicted RBP6.51□□□□□ -1.37
CSTF1-207ENST00000498689 KCTD12Q96CX2 325 aaKnown RBP6.51□□□□□ -1.37
CSTF1-207ENST00000498689 ZCCHC17Q9NP64 241 aaKnown RBP6.51□□□□□ -1.37
CSTF1-207ENST00000498689 PRKAG2Q9UGJ0 569 aa6.51□□□□□ -1.37
CSTF1-207ENST00000498689 ATP11BQ9Y2G3 1177 aa6.51□□□□□ -1.37
CSTF1-207ENST00000498689 USP17L3A6NCW0 530 aa6.5□□□□□ -1.37
CSTF1-207ENST00000498689 USP17L4A6NCW7 530 aa6.5□□□□□ -1.37
CSTF1-207ENST00000498689 RFXAPO00287 272 aa6.5□□□□□ -1.37
CSTF1-207ENST00000498689 CYP2C8P10632 490 aa6.5□□□□□ -1.37
CSTF1-207ENST00000498689 CETPP11597 493 aa6.5□□□□□ -1.37
CSTF1-207ENST00000498689 SSTR3P32745 418 aaPredicted RBP6.5□□□□□ -1.37
CSTF1-207ENST00000498689 SULT6B1Q6IMI4 303 aa6.5□□□□□ -1.37
CSTF1-207ENST00000498689 USP17L1Q7RTZ2 530 aa6.5□□□□□ -1.37
CSTF1-207ENST00000498689 FAM178BQ8IXR5 827 aa6.5□□□□□ -1.37
CSTF1-207ENST00000498689 NGEFQ8N5V2 710 aa6.5□□□□□ -1.37
CSTF1-207ENST00000498689 PTCD2Q8WV60 388 aaKnown RBP6.5□□□□□ -1.37
CSTF1-207ENST00000498689 CELF1Q92879 486 aaKnown RBP6.5□□□□□ -1.37
CSTF1-207ENST00000498689 SMCHD1A6NHR9 2005 aa6.5□□□□□ -1.37
CSTF1-207ENST00000498689 A0A1B0GUL6 1792 aa6.49□□□□□ -1.37
CSTF1-207ENST00000498689 CLRN2A0PK11 232 aa6.49□□□□□ -1.37
CSTF1-207ENST00000498689 TNPO2O14787 897 aaKnown RBP6.49□□□□□ -1.37
CSTF1-207ENST00000498689 DCXO43602 365 aa6.49□□□□□ -1.37
CSTF1-207ENST00000498689 HMGCRP04035 888 aa6.49□□□□□ -1.37
CSTF1-207ENST00000498689 FOXK1P85037 733 aa6.49□□□□□ -1.37
CSTF1-207ENST00000498689 DSG2Q14126 1118 aa6.49□□□□□ -1.37
CSTF1-207ENST00000498689 SLC10A5Q5PT55 438 aa6.49□□□□□ -1.37
CSTF1-207ENST00000498689 DACT2Q5SW24 774 aa6.49□□□□□ -1.37
CSTF1-207ENST00000498689 CCDC129Q6ZRS4 1044 aa6.49□□□□□ -1.37
CSTF1-207ENST00000498689 TTLL7Q6ZT98 887 aa6.49□□□□□ -1.37
CSTF1-207ENST00000498689 DDX46Q7L014 1031 aaKnown RBP6.49□□□□□ -1.37
CSTF1-207ENST00000498689 ZNF34Q8IZ26 560 aa6.49□□□□□ -1.37
CSTF1-207ENST00000498689 MTMR14Q8NCE2 650 aa6.49□□□□□ -1.37
CSTF1-207ENST00000498689 HERVK_113Q902F9 699 aa6.49□□□□□ -1.37
CSTF1-207ENST00000498689 ATOH1Q92858 354 aaPredicted RBP6.49□□□□□ -1.37
CSTF1-207ENST00000498689 ZNF428Q96B54 188 aa6.49□□□□□ -1.37
CSTF1-207ENST00000498689 MFSD14AQ96MC6 490 aa6.49□□□□□ -1.37
CSTF1-207ENST00000498689 FMNL2Q96PY5 1086 aa6.49□□□□□ -1.37
CSTF1-207ENST00000498689 KCNK17Q96T54 332 aa6.49□□□□□ -1.37
CSTF1-207ENST00000498689 EYA3Q99504 573 aa6.49□□□□□ -1.37
CSTF1-207ENST00000498689 ZC3H12CQ9C0D7 883 aaKnown RBP6.49□□□□□ -1.37
CSTF1-207ENST00000498689 PDLIM7Q9NR12 457 aa6.49□□□□□ -1.37
CSTF1-207ENST00000498689 SH2B1Q9NRF2 756 aaPredicted RBP6.49□□□□□ -1.37
CSTF1-207ENST00000498689 RALGAPA2Q2PPJ7 1873 aa6.48□□□□□ -1.37
CSTF1-207ENST00000498689 SPDYE5A6NIY4 337 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms