RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 WRNIP1Q96S55 665 aa15.55■□□□□ 0.08
HSPG2-213ENST00000498495 ELP3Q9H9T3 547 aa15.55■□□□□ 0.08
HSPG2-213ENST00000498495 DDX4Q9NQI0 724 aaKnown RBP15.55■□□□□ 0.08
HSPG2-213ENST00000498495 ECHDC1Q9NTX5 307 aa15.55■□□□□ 0.08
HSPG2-213ENST00000498495 ZBTB48P10074 688 aaPredicted RBP15.54■□□□□ 0.08
HSPG2-213ENST00000498495 TM4SF4P48230 202 aa15.54■□□□□ 0.08
HSPG2-213ENST00000498495 HDAC1Q13547 482 aaPredicted RBP15.54■□□□□ 0.08
HSPG2-213ENST00000498495 SLC9C2Q5TAH2 1124 aa15.54■□□□□ 0.08
HSPG2-213ENST00000498495 ANKRD45Q5TZF3 282 aa15.54■□□□□ 0.08
HSPG2-213ENST00000498495 GCC1Q96CN9 775 aa15.54■□□□□ 0.08
HSPG2-213ENST00000498495 WNK4Q96J92 1243 aa15.54■□□□□ 0.08
HSPG2-213ENST00000498495 HAUS7Q99871 368 aa15.54■□□□□ 0.08
HSPG2-213ENST00000498495 RWDD1Q9H446 243 aaPredicted RBP15.54■□□□□ 0.08
HSPG2-213ENST00000498495 PAG1Q9NWQ8 432 aa15.54■□□□□ 0.08
HSPG2-213ENST00000498495 AK9Q5TCS8 1911 aa15.53■□□□□ 0.08
HSPG2-213ENST00000498495 DDTLA6NHG4 134 aaPredicted RBP15.53■□□□□ 0.08
HSPG2-213ENST00000498495 MANSC4A6NHS7 340 aaPredicted RBP15.53■□□□□ 0.08
HSPG2-213ENST00000498495 TRPA1O75762 1119 aa15.53■□□□□ 0.08
HSPG2-213ENST00000498495 HSPA8P11142 646 aaKnown RBP15.53■□□□□ 0.08
HSPG2-213ENST00000498495 INHBEP58166 350 aa15.53■□□□□ 0.08
HSPG2-213ENST00000498495 DYNLL1P63167 89 aaKnown RBP15.53■□□□□ 0.08
HSPG2-213ENST00000498495 SREBF2Q12772 1141 aa15.53■□□□□ 0.08
HSPG2-213ENST00000498495 VGLL4Q14135 290 aa15.53■□□□□ 0.08
HSPG2-213ENST00000498495 SH3BP5LQ7L8J4 393 aa15.53■□□□□ 0.08
HSPG2-213ENST00000498495 CERS3Q8IU89 383 aa15.53■□□□□ 0.08
HSPG2-213ENST00000498495 MIGA1Q8NAN2 632 aa15.53■□□□□ 0.08
HSPG2-213ENST00000498495 TGFBRAP1Q8WUH2 860 aa15.53■□□□□ 0.08
HSPG2-213ENST00000498495 ZKSCAN4Q969J2 545 aaPredicted RBP15.53■□□□□ 0.08
HSPG2-213ENST00000498495 OPTNQ96CV9 577 aa15.53■□□□□ 0.08
HSPG2-213ENST00000498495 EDC3Q96F86 508 aaKnown RBP15.53■□□□□ 0.08
HSPG2-213ENST00000498495 OSBPL5Q9H0X9 879 aaPredicted RBP15.53■□□□□ 0.08
HSPG2-213ENST00000498495 PRDM10Q9NQV6 1147 aa15.53■□□□□ 0.08
HSPG2-213ENST00000498495 RNF186Q9NXI6 227 aa15.53■□□□□ 0.08
HSPG2-213ENST00000498495 TSKSQ9UJT2 592 aa15.53■□□□□ 0.08
HSPG2-213ENST00000498495 THSD7BQ9C0I4 1608 aa15.53■□□□□ 0.08
HSPG2-213ENST00000498495 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.52■□□□□ 0.08
HSPG2-213ENST00000498495 ZNF112Q9UJU3 913 aa15.52■□□□□ 0.08
HSPG2-213ENST00000498495 PDE6AP16499 860 aa15.51■□□□□ 0.07
HSPG2-213ENST00000498495 INPP5BP32019 993 aa15.51■□□□□ 0.07
HSPG2-213ENST00000498495 MAP3K10Q02779 954 aa15.51■□□□□ 0.07
HSPG2-213ENST00000498495 COL13A1Q5TAT6 717 aaPredicted RBP15.51■□□□□ 0.07
HSPG2-213ENST00000498495 ERO1BQ86YB8 467 aa15.51■□□□□ 0.07
HSPG2-213ENST00000498495 MAPKAPK5Q8IW41 473 aa15.51■□□□□ 0.07
HSPG2-213ENST00000498495 DHX36Q9H2U1 1008 aaKnown RBP15.51■□□□□ 0.07
HSPG2-213ENST00000498495 SAGE1Q9NXZ1 904 aa15.51■□□□□ 0.07
HSPG2-213ENST00000498495 RFX7Q2KHR2 1363 aa15.5■□□□□ 0.07
HSPG2-213ENST00000498495 MYO5AQ9Y4I1 1855 aaKnown RBP15.5■□□□□ 0.07
HSPG2-213ENST00000498495 ZNF532Q9HCE3 1301 aa15.5■□□□□ 0.07
HSPG2-213ENST00000498495 MAGEB6P1A0A0J9YX57 407 aa15.5■□□□□ 0.07
HSPG2-213ENST00000498495 TBC1D12O60347 775 aa15.5■□□□□ 0.07
HSPG2-213ENST00000498495 GJA5P36382 358 aa15.5■□□□□ 0.07
HSPG2-213ENST00000498495 USP5P45974 858 aa15.5■□□□□ 0.07
HSPG2-213ENST00000498495 ZSCAN25Q6NSZ9 544 aa15.5■□□□□ 0.07
HSPG2-213ENST00000498495 CNKSR2Q8WXI2 1034 aa15.5■□□□□ 0.07
HSPG2-213ENST00000498495 OTUD5Q96G74 571 aa15.5■□□□□ 0.07
HSPG2-213ENST00000498495 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.5■□□□□ 0.07
HSPG2-213ENST00000498495 SNCAIPQ9Y6H5 919 aa15.5■□□□□ 0.07
HSPG2-213ENST00000498495 TTC41PQ6P2S7 1318 aa15.49■□□□□ 0.07
HSPG2-213ENST00000498495 SPDYE5A6NIY4 337 aa15.49■□□□□ 0.07
HSPG2-213ENST00000498495 ERC2O15083 957 aa15.49■□□□□ 0.07
HSPG2-213ENST00000498495 IRX6P78412 446 aaPredicted RBP15.49■□□□□ 0.07
HSPG2-213ENST00000498495 TSHZ3Q63HK5 1081 aa15.49■□□□□ 0.07
HSPG2-213ENST00000498495 OTUD7BQ6GQQ9 843 aa15.49■□□□□ 0.07
HSPG2-213ENST00000498495 PI4KBQ9UBF8 816 aa15.49■□□□□ 0.07
HSPG2-213ENST00000498495 ATRNL1Q5VV63 1379 aa15.49■□□□□ 0.07
HSPG2-213ENST00000498495 FLT1P17948 1338 aa15.48■□□□□ 0.07
HSPG2-213ENST00000498495 PHF20L1A8MW92 1017 aa15.48■□□□□ 0.07
HSPG2-213ENST00000498495 ALDH1A1P00352 501 aa15.48■□□□□ 0.07
HSPG2-213ENST00000498495 IGHDP01880 384 aa15.48■□□□□ 0.07
HSPG2-213ENST00000498495 SLURP2P0DP57 97 aa15.48■□□□□ 0.07
HSPG2-213ENST00000498495 ADD2P35612 726 aa15.48■□□□□ 0.07
HSPG2-213ENST00000498495 GTF2A2P52657 109 aa15.48■□□□□ 0.07
HSPG2-213ENST00000498495 PPATQ06203 517 aa15.48■□□□□ 0.07
HSPG2-213ENST00000498495 B4GALNT3Q6L9W6 998 aa15.48■□□□□ 0.07
HSPG2-213ENST00000498495 IFNL1Q8IU54 200 aa15.48■□□□□ 0.07
HSPG2-213ENST00000498495 FOXP4Q8IVH2 680 aaPredicted RBP15.48■□□□□ 0.07
HSPG2-213ENST00000498495 PALD1Q9ULE6 856 aa15.48■□□□□ 0.07
HSPG2-213ENST00000498495 PCNTO95613 3336 aa15.48■□□□□ 0.07
HSPG2-213ENST00000498495 MAST2Q6P0Q8 1798 aa15.47■□□□□ 0.07
HSPG2-213ENST00000498495 TCRBV5S4A2TA0A5A2 114 aa15.47■□□□□ 0.07
HSPG2-213ENST00000498495 CTNND1O60716 968 aaKnown RBP15.47■□□□□ 0.07
HSPG2-213ENST00000498495 GLRX3O76003 335 aaKnown RBP15.47■□□□□ 0.07
HSPG2-213ENST00000498495 HLA-DOAP06340 250 aa15.47■□□□□ 0.07
HSPG2-213ENST00000498495 MX1P20591 662 aa15.47■□□□□ 0.07
HSPG2-213ENST00000498495 UBE3CQ15386 1083 aa15.47■□□□□ 0.07
HSPG2-213ENST00000498495 NOL9Q5SY16 702 aaKnown RBP15.47■□□□□ 0.07
HSPG2-213ENST00000498495 SMC5Q8IY18 1101 aa15.47■□□□□ 0.07
HSPG2-213ENST00000498495 OTUD7AQ8TE49 926 aaPredicted RBP15.47■□□□□ 0.07
HSPG2-213ENST00000498495 RIOK1Q9BRS2 568 aaKnown RBP15.47■□□□□ 0.07
HSPG2-213ENST00000498495 TRIM34Q9BYJ4 488 aa15.47■□□□□ 0.07
HSPG2-213ENST00000498495 PICK1Q9NRD5 415 aa15.47■□□□□ 0.07
HSPG2-213ENST00000498495 SAP30BPQ9UHR5 308 aaKnown RBP15.47■□□□□ 0.07
HSPG2-213ENST00000498495 HERC5Q9UII4 1024 aaKnown RBP15.47■□□□□ 0.07
HSPG2-213ENST00000498495 TESPA1A2RU30 521 aaPredicted RBP15.46■□□□□ 0.07
HSPG2-213ENST00000498495 IRF6O14896 467 aa15.46■□□□□ 0.07
HSPG2-213ENST00000498495 TBC1D8O95759 1140 aa15.46■□□□□ 0.07
HSPG2-213ENST00000498495 PPIL2Q13356 520 aa15.46■□□□□ 0.07
HSPG2-213ENST00000498495 SCYL3Q8IZE3 742 aa15.46■□□□□ 0.07
HSPG2-213ENST00000498495 CRACR2BQ8N4Y2 399 aaPredicted RBP15.46■□□□□ 0.07
HSPG2-213ENST00000498495 KBTBD3Q8NAB2 608 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms