RNA–Protein interactions for RNA: ENST00000498447.5

SMIM19-206, Transcript of small integral membrane protein 19, humanhuman

TSL 3

Gene SMIM19, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-206ENST00000498447 HABP4Q5JVS0 413 aaKnown RBP21.75■■□□□ 1.07
SMIM19-206ENST00000498447 ZSCAN29Q8IWY8 852 aaPredicted RBP21.75■■□□□ 1.07
SMIM19-206ENST00000498447 SLF2Q8IX21 1173 aa21.75■■□□□ 1.07
SMIM19-206ENST00000498447 SCYL3Q8IZE3 742 aa21.75■■□□□ 1.07
SMIM19-206ENST00000498447 FAM163AQ96GL9 167 aaPredicted RBP21.75■■□□□ 1.07
SMIM19-206ENST00000498447 XAGE2Q96GT9 111 aa21.75■■□□□ 1.07
SMIM19-206ENST00000498447 PARK7Q99497 189 aaKnown RBP21.75■■□□□ 1.07
SMIM19-206ENST00000498447 AKAP2Q9Y2D5 859 aa21.75■■□□□ 1.07
SMIM19-206ENST00000498447 FMNL1O95466 1100 aaPredicted RBP21.74■■□□□ 1.07
SMIM19-206ENST00000498447 OSBPP22059 807 aa21.74■■□□□ 1.07
SMIM19-206ENST00000498447 BTDP43251 543 aa21.74■■□□□ 1.07
SMIM19-206ENST00000498447 MTX1Q13505 466 aa21.74■■□□□ 1.07
SMIM19-206ENST00000498447 MVPQ14764 893 aaKnown RBP21.74■■□□□ 1.07
SMIM19-206ENST00000498447 SPTY2D1Q68D10 685 aaPredicted RBP21.74■■□□□ 1.07
SMIM19-206ENST00000498447 GPAT2Q6NUI2 795 aa21.74■■□□□ 1.07
SMIM19-206ENST00000498447 DDX4Q9NQI0 724 aaKnown RBP21.74■■□□□ 1.07
SMIM19-206ENST00000498447 PICK1Q9NRD5 415 aa21.74■■□□□ 1.07
SMIM19-206ENST00000498447 ZHX2Q9Y6X8 837 aa21.74■■□□□ 1.07
SMIM19-206ENST00000498447 DDTLA6NHG4 134 aaPredicted RBP21.73■■□□□ 1.07
SMIM19-206ENST00000498447 CYP2C8P10632 490 aa21.73■■□□□ 1.07
SMIM19-206ENST00000498447 PTPRAP18433 802 aa21.73■■□□□ 1.07
SMIM19-206ENST00000498447 HOXD10P28358 340 aa21.73■■□□□ 1.07
SMIM19-206ENST00000498447 MAP3K10Q02779 954 aa21.73■■□□□ 1.07
SMIM19-206ENST00000498447 PICALMQ13492 652 aa21.73■■□□□ 1.07
SMIM19-206ENST00000498447 MROH7-TTC4A0A0A0MT08 1334 aa21.73■■□□□ 1.07
SMIM19-206ENST00000498447 A0A0G2JLL6 359 aaPredicted RBP21.72■■□□□ 1.07
SMIM19-206ENST00000498447 SLURP2P0DP57 97 aa21.72■■□□□ 1.07
SMIM19-206ENST00000498447 BCRP11274 1271 aa21.72■■□□□ 1.07
SMIM19-206ENST00000498447 MTFR1Q15390 333 aa21.72■■□□□ 1.07
SMIM19-206ENST00000498447 PRRT2Q7Z6L0 340 aaPredicted RBP21.72■■□□□ 1.07
SMIM19-206ENST00000498447 RAET1EQ8TD07 263 aa21.72■■□□□ 1.07
SMIM19-206ENST00000498447 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.72■■□□□ 1.07
SMIM19-206ENST00000498447 DOCK1Q14185 1865 aa21.72■■□□□ 1.07
SMIM19-206ENST00000498447 MYPNQ86TC9 1320 aa21.72■■□□□ 1.07
SMIM19-206ENST00000498447 GRK4P32298 578 aa21.71■■□□□ 1.07
SMIM19-206ENST00000498447 MECOMQ03112 1051 aa21.71■■□□□ 1.07
SMIM19-206ENST00000498447 ERICH6Q7L0X2 663 aa21.71■■□□□ 1.07
SMIM19-206ENST00000498447 FASTKD5Q7L8L6 764 aaKnown RBP21.71■■□□□ 1.07
SMIM19-206ENST00000498447 AFG3L2Q9Y4W6 797 aa21.71■■□□□ 1.07
SMIM19-206ENST00000498447 PTPRFP10586 1907 aa21.7■■□□□ 1.07
SMIM19-206ENST00000498447 GPR75-ASB3A0A0A6YYF3 556 aa21.7■■□□□ 1.06
SMIM19-206ENST00000498447 GADL1Q6ZQY3 521 aa21.7■■□□□ 1.06
SMIM19-206ENST00000498447 ZNF384Q8TF68 577 aa21.7■■□□□ 1.06
SMIM19-206ENST00000498447 NEUROD6Q96NK8 337 aa21.7■■□□□ 1.06
SMIM19-206ENST00000498447 HMG20BQ9P0W2 317 aa21.7■■□□□ 1.06
SMIM19-206ENST00000498447 PHIPQ8WWQ0 1821 aa21.7■■□□□ 1.06
SMIM19-206ENST00000498447 MGAMO43451 1857 aa21.69■■□□□ 1.06
SMIM19-206ENST00000498447 CCER2I3L3R5 266 aa21.69■■□□□ 1.06
SMIM19-206ENST00000498447 CTNND1O60716 968 aaKnown RBP21.69■■□□□ 1.06
SMIM19-206ENST00000498447 FCGRTP55899 365 aa21.69■■□□□ 1.06
SMIM19-206ENST00000498447 RHBDL3P58872 404 aa21.69■■□□□ 1.06
SMIM19-206ENST00000498447 SHISA4Q96DD7 197 aa21.69■■□□□ 1.06
SMIM19-206ENST00000498447 TRIM27P14373 513 aa21.68■■□□□ 1.06
SMIM19-206ENST00000498447 PRKCZQ05513 592 aa21.68■■□□□ 1.06
SMIM19-206ENST00000498447 PI16Q6UXB8 463 aa21.68■■□□□ 1.06
SMIM19-206ENST00000498447 SPATA5Q8NB90 893 aa21.68■■□□□ 1.06
SMIM19-206ENST00000498447 TNNQ9UQP3 1299 aa21.68■■□□□ 1.06
SMIM19-206ENST00000498447 SLC45A1Q9Y2W3 748 aa21.68■■□□□ 1.06
SMIM19-206ENST00000498447 IPO8O15397 1037 aaKnown RBP21.67■■□□□ 1.06
SMIM19-206ENST00000498447 GNAI2P04899 355 aa21.67■■□□□ 1.06
SMIM19-206ENST00000498447 GORABQ5T7V8 394 aa21.67■■□□□ 1.06
SMIM19-206ENST00000498447 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.67■■□□□ 1.06
SMIM19-206ENST00000498447 TRIM75PA6NK02 468 aa21.66■■□□□ 1.06
SMIM19-206ENST00000498447 NPM3O75607 178 aaKnown RBP21.66■■□□□ 1.06
SMIM19-206ENST00000498447 ARID4AP29374 1257 aaPredicted RBP21.66■■□□□ 1.06
SMIM19-206ENST00000498447 GSTO1P78417 241 aa21.66■■□□□ 1.06
SMIM19-206ENST00000498447 MAPK8IP2Q13387 824 aaPredicted RBP21.66■■□□□ 1.06
SMIM19-206ENST00000498447 ATF7IPQ6VMQ6 1270 aa21.66■■□□□ 1.06
SMIM19-206ENST00000498447 TBC1D9Q6ZT07 1266 aa21.66■■□□□ 1.06
SMIM19-206ENST00000498447 CCDC84Q86UT8 332 aaPredicted RBP21.66■■□□□ 1.06
SMIM19-206ENST00000498447 NSUN4Q96CB9 384 aaKnown RBP21.66■■□□□ 1.06
SMIM19-206ENST00000498447 TRIOBPQ9H2D6 2365 aa21.65■■□□□ 1.06
SMIM19-206ENST00000498447 PNMA6EA0A0J9YXQ4 647 aa21.65■■□□□ 1.06
SMIM19-206ENST00000498447 TBC1D12O60347 775 aa21.65■■□□□ 1.06
SMIM19-206ENST00000498447 LDHCP07864 332 aa21.65■■□□□ 1.06
SMIM19-206ENST00000498447 CCL5P13501 91 aa21.65■■□□□ 1.06
SMIM19-206ENST00000498447 SLAIN1Q8ND83 568 aa21.65■■□□□ 1.06
SMIM19-206ENST00000498447 NKX2-3Q8TAU0 364 aa21.65■■□□□ 1.06
SMIM19-206ENST00000498447 FRAT1Q92837 279 aaPredicted RBP21.65■■□□□ 1.06
SMIM19-206ENST00000498447 BIN2Q9UBW5 565 aaPredicted RBP21.65■■□□□ 1.06
SMIM19-206ENST00000498447 GABRQQ9UN88 632 aa21.65■■□□□ 1.06
SMIM19-206ENST00000498447 COL2A1P02458 1487 aaPredicted RBP21.64■■□□□ 1.06
SMIM19-206ENST00000498447 FAM196BA6NMK8 535 aa21.64■■□□□ 1.05
SMIM19-206ENST00000498447 BCAR3O75815 825 aa21.64■■□□□ 1.05
SMIM19-206ENST00000498447 MAP4K4O95819 1239 aaPredicted RBP21.64■■□□□ 1.05
SMIM19-206ENST00000498447 GJA8P48165 433 aa21.64■■□□□ 1.05
SMIM19-206ENST00000498447 UBXN2AP68543 259 aa21.64■■□□□ 1.05
SMIM19-206ENST00000498447 G3BP1Q13283 466 aaKnown RBP eCLIP21.64■■□□□ 1.05
SMIM19-206ENST00000498447 SMCR8Q8TEV9 937 aaPredicted RBP21.64■■□□□ 1.05
SMIM19-206ENST00000498447 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.64■■□□□ 1.05
SMIM19-206ENST00000498447 RAI14Q9P0K7 980 aa21.64■■□□□ 1.05
SMIM19-206ENST00000498447 AGTPBP1Q9UPW5 1226 aa21.64■■□□□ 1.05
SMIM19-206ENST00000498447 COLQQ9Y215 455 aaPredicted RBP21.64■■□□□ 1.05
SMIM19-206ENST00000498447 H0YGN5 161 aa21.63■■□□□ 1.05
SMIM19-206ENST00000498447 GJB1P08034 283 aa21.63■■□□□ 1.05
SMIM19-206ENST00000498447 MCAMP43121 646 aa21.63■■□□□ 1.05
SMIM19-206ENST00000498447 CLUAP1Q96AJ1 413 aa21.63■■□□□ 1.05
SMIM19-206ENST00000498447 RNF208Q9H0X6 261 aa21.63■■□□□ 1.05
SMIM19-206ENST00000498447 OSBPL5Q9H0X9 879 aaPredicted RBP21.63■■□□□ 1.05
SMIM19-206ENST00000498447 FXR1P51114 621 aaKnown RBP eCLIP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms