RNA–Protein interactions for RNA: ENST00000498219.5

HPS1-214, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 5

Gene HPS1, Length 845 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-214ENST00000498219 FOCADQ5VW36 1801 aa17.91■□□□□ 0.46
HPS1-214ENST00000498219 DDTLA6NHG4 134 aaPredicted RBP17.9■□□□□ 0.46
HPS1-214ENST00000498219 ENTPD3O75355 529 aa17.9■□□□□ 0.46
HPS1-214ENST00000498219 HSPA8P11142 646 aaKnown RBP17.9■□□□□ 0.46
HPS1-214ENST00000498219 ATP5JP18859 108 aa17.9■□□□□ 0.46
HPS1-214ENST00000498219 GJA5P36382 358 aa17.9■□□□□ 0.46
HPS1-214ENST00000498219 CTCFP49711 727 aaPredicted RBP17.9■□□□□ 0.46
HPS1-214ENST00000498219 LBX1P52954 281 aa17.9■□□□□ 0.46
HPS1-214ENST00000498219 MAP3K9P80192 1104 aa17.9■□□□□ 0.46
HPS1-214ENST00000498219 SPRYD7Q5W111 196 aa17.9■□□□□ 0.46
HPS1-214ENST00000498219 MIGA1Q8NAN2 632 aa17.9■□□□□ 0.46
HPS1-214ENST00000498219 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.9■□□□□ 0.46
HPS1-214ENST00000498219 OTUD7AQ8TE49 926 aaPredicted RBP17.9■□□□□ 0.46
HPS1-214ENST00000498219 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.9■□□□□ 0.46
HPS1-214ENST00000498219 ZKSCAN4Q969J2 545 aaPredicted RBP17.9■□□□□ 0.46
HPS1-214ENST00000498219 WNK4Q96J92 1243 aa17.9■□□□□ 0.46
HPS1-214ENST00000498219 WRNIP1Q96S55 665 aa17.9■□□□□ 0.46
HPS1-214ENST00000498219 MYH7P12883 1935 aa17.9■□□□□ 0.46
HPS1-214ENST00000498219 VGLL4Q14135 290 aa17.89■□□□□ 0.45
HPS1-214ENST00000498219 COL13A1Q5TAT6 717 aaPredicted RBP17.89■□□□□ 0.45
HPS1-214ENST00000498219 SMC5Q8IY18 1101 aa17.89■□□□□ 0.45
HPS1-214ENST00000498219 ZNF341Q9BYN7 854 aa17.89■□□□□ 0.45
HPS1-214ENST00000498219 CASP8AP2Q9UKL3 1982 aa17.89■□□□□ 0.45
HPS1-214ENST00000498219 NEFLP07196 543 aa17.88■□□□□ 0.45
HPS1-214ENST00000498219 INPP5BP32019 993 aa17.88■□□□□ 0.45
HPS1-214ENST00000498219 MAP3K12Q12852 859 aa17.88■□□□□ 0.45
HPS1-214ENST00000498219 SLFNL1Q499Z3 407 aa17.88■□□□□ 0.45
HPS1-214ENST00000498219 DCAF15Q66K64 600 aa17.88■□□□□ 0.45
HPS1-214ENST00000498219 MAPKAPK5Q8IW41 473 aa17.88■□□□□ 0.45
HPS1-214ENST00000498219 HAUS7Q99871 368 aa17.88■□□□□ 0.45
HPS1-214ENST00000498219 PAG1Q9NWQ8 432 aa17.88■□□□□ 0.45
HPS1-214ENST00000498219 MYH1P12882 1939 aa17.88■□□□□ 0.45
HPS1-214ENST00000498219 FAM196BA6NMK8 535 aa17.87■□□□□ 0.45
HPS1-214ENST00000498219 TRPA1O75762 1119 aa17.87■□□□□ 0.45
HPS1-214ENST00000498219 BAG3O95817 575 aa17.87■□□□□ 0.45
HPS1-214ENST00000498219 CHGBP05060 677 aa17.87■□□□□ 0.45
HPS1-214ENST00000498219 PDE6AP16499 860 aa17.87■□□□□ 0.45
HPS1-214ENST00000498219 PPP4CP60510 307 aa17.87■□□□□ 0.45
HPS1-214ENST00000498219 TTF1Q15361 905 aaPredicted RBP17.87■□□□□ 0.45
HPS1-214ENST00000498219 TGFBRAP1Q8WUH2 860 aa17.87■□□□□ 0.45
HPS1-214ENST00000498219 OPTNQ96CV9 577 aa17.87■□□□□ 0.45
HPS1-214ENST00000498219 HOOK2Q96ED9 719 aa17.87■□□□□ 0.45
HPS1-214ENST00000498219 LNPKQ9C0E8 428 aa17.87■□□□□ 0.45
HPS1-214ENST00000498219 OSBPL5Q9H0X9 879 aaPredicted RBP17.87■□□□□ 0.45
HPS1-214ENST00000498219 ECHDC1Q9NTX5 307 aa17.87■□□□□ 0.45
HPS1-214ENST00000498219 RNF186Q9NXI6 227 aa17.87■□□□□ 0.45
HPS1-214ENST00000498219 CSADQ9Y600 493 aa17.87■□□□□ 0.45
HPS1-214ENST00000498219 SNCAIPQ9Y6H5 919 aa17.87■□□□□ 0.45
HPS1-214ENST00000498219 ATRNL1Q5VV63 1379 aa17.87■□□□□ 0.45
HPS1-214ENST00000498219 SIPA1L1O43166 1804 aa17.86■□□□□ 0.45
HPS1-214ENST00000498219 SLC9C2Q5TAH2 1124 aa17.86■□□□□ 0.45
HPS1-214ENST00000498219 LAMB1P07942 1786 aa17.86■□□□□ 0.45
HPS1-214ENST00000498219 UNCXA6NJT0 531 aa17.85■□□□□ 0.45
HPS1-214ENST00000498219 MAP4K4O95819 1239 aaPredicted RBP17.85■□□□□ 0.45
HPS1-214ENST00000498219 SLC4A8Q2Y0W8 1093 aa17.85■□□□□ 0.45
HPS1-214ENST00000498219 OTUD5Q96G74 571 aa17.85■□□□□ 0.45
HPS1-214ENST00000498219 ZNF532Q9HCE3 1301 aa17.85■□□□□ 0.45
HPS1-214ENST00000498219 ZBTB47Q9UFB7 747 aaPredicted RBP17.85■□□□□ 0.45
HPS1-214ENST00000498219 SAP30BPQ9UHR5 308 aaKnown RBP17.85■□□□□ 0.45
HPS1-214ENST00000498219 FLT1P17948 1338 aa17.84■□□□□ 0.45
HPS1-214ENST00000498219 ZBTB48P10074 688 aaPredicted RBP17.84■□□□□ 0.45
HPS1-214ENST00000498219 PLCG2P16885 1265 aa17.84■□□□□ 0.45
HPS1-214ENST00000498219 NUCB1Q02818 461 aa17.84■□□□□ 0.45
HPS1-214ENST00000498219 ZNF112Q9UJU3 913 aa17.84■□□□□ 0.45
HPS1-214ENST00000498219 TCRBV5S4A2TA0A5A2 114 aa17.83■□□□□ 0.44
HPS1-214ENST00000498219 NPM3O75607 178 aaKnown RBP17.83■□□□□ 0.44
HPS1-214ENST00000498219 TM4SF4P48230 202 aa17.83■□□□□ 0.44
HPS1-214ENST00000498219 CHD1LQ86WJ1 897 aa17.83■□□□□ 0.44
HPS1-214ENST00000498219 GPATCH3Q96I76 525 aa17.83■□□□□ 0.44
HPS1-214ENST00000498219 DOCK1Q14185 1865 aa17.82■□□□□ 0.44
HPS1-214ENST00000498219 NAV1Q8NEY1 1877 aa17.82■□□□□ 0.44
HPS1-214ENST00000498219 ATAD5Q96QE3 1844 aa17.82■□□□□ 0.44
HPS1-214ENST00000498219 SALL3Q9BXA9 1300 aa17.82■□□□□ 0.44
HPS1-214ENST00000498219 MAGEB6P1A0A0J9YX57 407 aa17.82■□□□□ 0.44
HPS1-214ENST00000498219 MANSC4A6NHS7 340 aaPredicted RBP17.82■□□□□ 0.44
HPS1-214ENST00000498219 SPDYE5A6NIY4 337 aa17.82■□□□□ 0.44
HPS1-214ENST00000498219 PHF20L1A8MW92 1017 aa17.82■□□□□ 0.44
HPS1-214ENST00000498219 CA12O43570 354 aa17.82■□□□□ 0.44
HPS1-214ENST00000498219 IGSF3O75054 1194 aa17.82■□□□□ 0.44
HPS1-214ENST00000498219 TBC1D8O95759 1140 aa17.82■□□□□ 0.44
HPS1-214ENST00000498219 ADD2P35612 726 aa17.82■□□□□ 0.44
HPS1-214ENST00000498219 SREBF2Q12772 1141 aa17.82■□□□□ 0.44
HPS1-214ENST00000498219 REM2Q8IYK8 340 aaPredicted RBP17.82■□□□□ 0.44
HPS1-214ENST00000498219 RIOK1Q9BRS2 568 aaKnown RBP17.82■□□□□ 0.44
HPS1-214ENST00000498219 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.82■□□□□ 0.44
HPS1-214ENST00000498219 PALD1Q9ULE6 856 aa17.82■□□□□ 0.44
HPS1-214ENST00000498219 IGF2BP3O00425 579 aaKnown RBP eCLIP17.81■□□□□ 0.44
HPS1-214ENST00000498219 MX1P20591 662 aa17.81■□□□□ 0.44
HPS1-214ENST00000498219 USP5P45974 858 aa17.81■□□□□ 0.44
HPS1-214ENST00000498219 LCORLQ8N3X6 602 aa17.81■□□□□ 0.44
HPS1-214ENST00000498219 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.81■□□□□ 0.44
HPS1-214ENST00000498219 PRDM10Q9NQV6 1147 aa17.81■□□□□ 0.44
HPS1-214ENST00000498219 COL2A1P02458 1487 aaPredicted RBP17.81■□□□□ 0.44
HPS1-214ENST00000498219 BAZ2AQ9UIF9 1905 aaKnown RBP17.8■□□□□ 0.44
HPS1-214ENST00000498219 MAP3K10Q02779 954 aa17.8■□□□□ 0.44
HPS1-214ENST00000498219 CCDC84Q86UT8 332 aaPredicted RBP17.8■□□□□ 0.44
HPS1-214ENST00000498219 ERO1BQ86YB8 467 aa17.8■□□□□ 0.44
HPS1-214ENST00000498219 IFNL1Q8IU54 200 aa17.8■□□□□ 0.44
HPS1-214ENST00000498219 PI4K2BQ8TCG2 481 aa17.8■□□□□ 0.44
HPS1-214ENST00000498219 MS4A4AQ96JQ5 239 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms