RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 ADAMTSL1Q8N6G6 1762 aa20.93■□□□□ 0.94
CHRNA4-206ENST00000498043 USP5P45974 858 aa20.93■□□□□ 0.94
CHRNA4-206ENST00000498043 SLC4A8Q2Y0W8 1093 aa20.93■□□□□ 0.94
CHRNA4-206ENST00000498043 TMEM67Q5HYA8 995 aa20.93■□□□□ 0.94
CHRNA4-206ENST00000498043 NSUN7Q8NE18 718 aaKnown RBP20.93■□□□□ 0.94
CHRNA4-206ENST00000498043 MXD3Q9BW11 206 aa20.93■□□□□ 0.94
CHRNA4-206ENST00000498043 SENP2Q9HC62 589 aa20.93■□□□□ 0.94
CHRNA4-206ENST00000498043 F8W031 263 aaPredicted RBP20.92■□□□□ 0.94
CHRNA4-206ENST00000498043 C21orf2O43822 256 aa20.92■□□□□ 0.94
CHRNA4-206ENST00000498043 CYP2D6P10635 497 aa20.92■□□□□ 0.94
CHRNA4-206ENST00000498043 LARP1BQ659C4 914 aaKnown RBP20.92■□□□□ 0.94
CHRNA4-206ENST00000498043 CERS5Q8N5B7 392 aa20.92■□□□□ 0.94
CHRNA4-206ENST00000498043 ZKSCAN3Q9BRR0 538 aa20.92■□□□□ 0.94
CHRNA4-206ENST00000498043 ARPP21Q9UBL0 812 aaPredicted RBP20.92■□□□□ 0.94
CHRNA4-206ENST00000498043 PTPDC1A2A3K4 754 aa20.92■□□□□ 0.94
CHRNA4-206ENST00000498043 PPFIA3O75145 1194 aa20.92■□□□□ 0.94
CHRNA4-206ENST00000498043 CTDNEP1O95476 244 aa20.92■□□□□ 0.94
CHRNA4-206ENST00000498043 LLPHQ9BRT6 129 aaKnown RBP20.92■□□□□ 0.94
CHRNA4-206ENST00000498043 LY9Q9HBG7 655 aa20.92■□□□□ 0.94
CHRNA4-206ENST00000498043 HPS5Q9UPZ3 1129 aa20.92■□□□□ 0.94
CHRNA4-206ENST00000498043 MTMR6Q9Y217 621 aa20.92■□□□□ 0.94
CHRNA4-206ENST00000498043 IFIT3O14879 490 aaKnown RBP20.91■□□□□ 0.94
CHRNA4-206ENST00000498043 IGDCC4Q8TDY8 1250 aa20.91■□□□□ 0.94
CHRNA4-206ENST00000498043 MCM9Q9NXL9 1143 aa20.91■□□□□ 0.94
CHRNA4-206ENST00000498043 SCN9AQ15858 1988 aa20.91■□□□□ 0.94
CHRNA4-206ENST00000498043 ZNF646O15015 1829 aaPredicted RBP20.91■□□□□ 0.94
CHRNA4-206ENST00000498043 DDX60LQ5H9U9 1706 aaKnown RBP20.91■□□□□ 0.94
CHRNA4-206ENST00000498043 PRDM1O75626 825 aa20.9■□□□□ 0.94
CHRNA4-206ENST00000498043 F13A1P00488 732 aa20.9■□□□□ 0.94
CHRNA4-206ENST00000498043 DPEP1P16444 411 aa20.9■□□□□ 0.94
CHRNA4-206ENST00000498043 PDCP20941 246 aa20.9■□□□□ 0.94
CHRNA4-206ENST00000498043 PPP4CP60510 307 aa20.9■□□□□ 0.94
CHRNA4-206ENST00000498043 NFXL1Q6ZNB6 911 aa20.9■□□□□ 0.94
CHRNA4-206ENST00000498043 SMARCC2Q8TAQ2 1214 aa20.9■□□□□ 0.94
CHRNA4-206ENST00000498043 GAKO14976 1311 aa20.9■□□□□ 0.94
CHRNA4-206ENST00000498043 GPR75-ASB3A0A0A6YYF3 556 aa20.9■□□□□ 0.94
CHRNA4-206ENST00000498043 USP17L8P0C7I0 530 aa20.9■□□□□ 0.94
CHRNA4-206ENST00000498043 AOC3Q16853 763 aa20.9■□□□□ 0.94
CHRNA4-206ENST00000498043 CDC37L1Q7L3B6 337 aa20.9■□□□□ 0.94
CHRNA4-206ENST00000498043 SLF2Q8IX21 1173 aa20.9■□□□□ 0.94
CHRNA4-206ENST00000498043 TTLL6Q8N841 843 aa20.9■□□□□ 0.94
CHRNA4-206ENST00000498043 TGFBRAP1Q8WUH2 860 aa20.9■□□□□ 0.94
CHRNA4-206ENST00000498043 ESR2Q92731 530 aa20.9■□□□□ 0.94
CHRNA4-206ENST00000498043 KCNQ5Q9NR82 932 aa20.9■□□□□ 0.94
CHRNA4-206ENST00000498043 ATF5Q9Y2D1 282 aaPredicted RBP20.9■□□□□ 0.94
CHRNA4-206ENST00000498043 TRAK2O60296 914 aa20.89■□□□□ 0.93
CHRNA4-206ENST00000498043 ECE2O60344 883 aa20.89■□□□□ 0.93
CHRNA4-206ENST00000498043 APOA5Q6Q788 366 aa20.89■□□□□ 0.93
CHRNA4-206ENST00000498043 RXRAP19793 462 aa20.89■□□□□ 0.93
CHRNA4-206ENST00000498043 SART3Q15020 963 aaKnown RBP20.89■□□□□ 0.93
CHRNA4-206ENST00000498043 PODNQ7Z5L7 613 aa20.89■□□□□ 0.93
CHRNA4-206ENST00000498043 MICU3Q86XE3 530 aa20.89■□□□□ 0.93
CHRNA4-206ENST00000498043 MAPKAPK5Q8IW41 473 aa20.89■□□□□ 0.93
CHRNA4-206ENST00000498043 FAM184AQ8NB25 1140 aa20.89■□□□□ 0.93
CHRNA4-206ENST00000498043 MKRN1Q9UHC7 482 aaKnown RBP20.89■□□□□ 0.93
CHRNA4-206ENST00000498043 TTF2Q9UNY4 1162 aaKnown RBP20.89■□□□□ 0.93
CHRNA4-206ENST00000498043 DAGLAQ9Y4D2 1042 aa20.89■□□□□ 0.93
CHRNA4-206ENST00000498043 FOCADQ5VW36 1801 aa20.88■□□□□ 0.93
CHRNA4-206ENST00000498043 SBK1Q52WX2 424 aa20.88■□□□□ 0.93
CHRNA4-206ENST00000498043 TEX11Q8IYF3 940 aa20.88■□□□□ 0.93
CHRNA4-206ENST00000498043 UBAC1Q9BSL1 405 aa20.88■□□□□ 0.93
CHRNA4-206ENST00000498043 MYL10Q9BUA6 226 aa20.88■□□□□ 0.93
CHRNA4-206ENST00000498043 RANBP6O60518 1105 aaKnown RBP20.87■□□□□ 0.93
CHRNA4-206ENST00000498043 PTMSP20962 102 aa20.87■□□□□ 0.93
CHRNA4-206ENST00000498043 KCNA3P22001 575 aa20.87■□□□□ 0.93
CHRNA4-206ENST00000498043 METAP2P50579 478 aaKnown RBP eCLIP20.87■□□□□ 0.93
CHRNA4-206ENST00000498043 HMGN5P82970 282 aaKnown RBP20.87■□□□□ 0.93
CHRNA4-206ENST00000498043 R3HDM1Q15032 1099 aaKnown RBP20.87■□□□□ 0.93
CHRNA4-206ENST00000498043 CC2D2BQ6DHV5 1058 aa20.87■□□□□ 0.93
CHRNA4-206ENST00000498043 ILDR1Q86SU0 546 aaPredicted RBP20.87■□□□□ 0.93
CHRNA4-206ENST00000498043 SGMS1Q86VZ5 419 aa20.87■□□□□ 0.93
CHRNA4-206ENST00000498043 CERS3Q8IU89 383 aa20.87■□□□□ 0.93
CHRNA4-206ENST00000498043 FAM163AQ96GL9 167 aaPredicted RBP20.87■□□□□ 0.93
CHRNA4-206ENST00000498043 SUGT1Q9Y2Z0 365 aa20.87■□□□□ 0.93
CHRNA4-206ENST00000498043 ERICH2A1L162 156 aa20.87■□□□□ 0.93
CHRNA4-206ENST00000498043 LIFRP42702 1097 aa20.87■□□□□ 0.93
CHRNA4-206ENST00000498043 FOSBP53539 338 aa20.87■□□□□ 0.93
CHRNA4-206ENST00000498043 WTAPQ15007 396 aa20.87■□□□□ 0.93
CHRNA4-206ENST00000498043 CCDC144CPQ8IYA2 1237 aa20.87■□□□□ 0.93
CHRNA4-206ENST00000498043 SAP30BPQ9UHR5 308 aaKnown RBP20.87■□□□□ 0.93
CHRNA4-206ENST00000498043 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.87■□□□□ 0.93
CHRNA4-206ENST00000498043 CCDC69A6NI79 296 aa20.86■□□□□ 0.93
CHRNA4-206ENST00000498043 SLC3A2P08195 630 aaKnown RBP20.86■□□□□ 0.93
CHRNA4-206ENST00000498043 PCP11498 1178 aaKnown RBP20.86■□□□□ 0.93
CHRNA4-206ENST00000498043 PLCG2P16885 1265 aa20.86■□□□□ 0.93
CHRNA4-206ENST00000498043 SCNN1DP51172 638 aa20.86■□□□□ 0.93
CHRNA4-206ENST00000498043 RHBDL3P58872 404 aa20.86■□□□□ 0.93
CHRNA4-206ENST00000498043 MTFR1LQ9H019 292 aa20.86■□□□□ 0.93
CHRNA4-206ENST00000498043 TNKSO95271 1327 aa20.86■□□□□ 0.93
CHRNA4-206ENST00000498043 CPLX1O14810 134 aa20.85■□□□□ 0.93
CHRNA4-206ENST00000498043 ZBTB43O43298 467 aa20.85■□□□□ 0.93
CHRNA4-206ENST00000498043 DHX16O60231 1041 aaKnown RBP20.85■□□□□ 0.93
CHRNA4-206ENST00000498043 FGRP09769 529 aa20.85■□□□□ 0.93
CHRNA4-206ENST00000498043 POLD1P28340 1107 aa20.85■□□□□ 0.93
CHRNA4-206ENST00000498043 KIAA2012Q0VF49 1180 aa20.85■□□□□ 0.93
CHRNA4-206ENST00000498043 CCDC93Q567U6 631 aa20.85■□□□□ 0.93
CHRNA4-206ENST00000498043 FERMT3Q86UX7 667 aa20.85■□□□□ 0.93
CHRNA4-206ENST00000498043 CHMP4CQ96CF2 233 aa20.85■□□□□ 0.93
CHRNA4-206ENST00000498043 TCHHQ07283 1943 aa20.85■□□□□ 0.93
CHRNA4-206ENST00000498043 PPIP5K2O43314 1243 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms