RNA–Protein interactions for RNA: ENST00000497784.1

BRAF-205, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 5

Gene BRAF, Length 2,336 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-205ENST00000497784 RSPH6AQ9H0K4 717 aa11.02□□□□□ -0.65
BRAF-205ENST00000497784 TDRD3Q9H7E2 651 aaKnown RBP11.02□□□□□ -0.65
BRAF-205ENST00000497784 BABAM1Q9NWV8 329 aa11.02□□□□□ -0.65
BRAF-205ENST00000497784 TCP10L2B9ZVM9 353 aa11.01□□□□□ -0.65
BRAF-205ENST00000497784 PROB1E7EW31 1015 aa11.01□□□□□ -0.65
BRAF-205ENST00000497784 PABPC4Q13310 644 aaKnown RBP eCLIP11.01□□□□□ -0.65
BRAF-205ENST00000497784 SKIV2LQ15477 1246 aaKnown RBP11.01□□□□□ -0.65
BRAF-205ENST00000497784 PUS10Q3MIT2 529 aaKnown RBP11.01□□□□□ -0.65
BRAF-205ENST00000497784 CCDC129Q6ZRS4 1044 aa11.01□□□□□ -0.65
BRAF-205ENST00000497784 DZIP1LQ8IYY4 767 aaKnown RBP11.01□□□□□ -0.65
BRAF-205ENST00000497784 THUMPD2Q9BTF0 503 aaKnown RBP11.01□□□□□ -0.65
BRAF-205ENST00000497784 TMOD2Q9NZR1 351 aa11.01□□□□□ -0.65
BRAF-205ENST00000497784 DDX20Q9UHI6 824 aaKnown RBP11.01□□□□□ -0.65
BRAF-205ENST00000497784 ATN1P54259 1190 aaPredicted RBP11.01□□□□□ -0.65
BRAF-205ENST00000497784 BMP8AQ7Z5Y6 402 aa11.01□□□□□ -0.65
BRAF-205ENST00000497784 MRIQ9BWK5 157 aa11.01□□□□□ -0.65
BRAF-205ENST00000497784 MTIF3Q9H2K0 278 aaKnown RBP11.01□□□□□ -0.65
BRAF-205ENST00000497784 SLC28A3Q9HAS3 691 aa11.01□□□□□ -0.65
BRAF-205ENST00000497784 MORF4L1Q9UBU8 362 aa11.01□□□□□ -0.65
BRAF-205ENST00000497784 AGTPBP1Q9UPW5 1226 aa11.01□□□□□ -0.65
BRAF-205ENST00000497784 AOX1Q06278 1338 aa11□□□□□ -0.65
BRAF-205ENST00000497784 PCCAP05165 728 aaPredicted RBP11□□□□□ -0.65
BRAF-205ENST00000497784 PPIGQ13427 754 aaKnown RBP eCLIP11□□□□□ -0.65
BRAF-205ENST00000497784 ANKRD13CQ8N6S4 541 aa11□□□□□ -0.65
BRAF-205ENST00000497784 KBTBD13C9JR72 458 aa11□□□□□ -0.65
BRAF-205ENST00000497784 RGS2P41220 211 aa11□□□□□ -0.65
BRAF-205ENST00000497784 EPHB4P54760 987 aa11□□□□□ -0.65
BRAF-205ENST00000497784 KCTD2Q14681 263 aa11□□□□□ -0.65
BRAF-205ENST00000497784 ZNF804AQ7Z570 1209 aa11□□□□□ -0.65
BRAF-205ENST00000497784 TXNRD3Q86VQ6 643 aa11□□□□□ -0.65
BRAF-205ENST00000497784 CDAN1Q8IWY9 1227 aa11□□□□□ -0.65
BRAF-205ENST00000497784 PRSS33Q8NF86 280 aa11□□□□□ -0.65
BRAF-205ENST00000497784 GAKO14976 1311 aa10.99□□□□□ -0.65
BRAF-205ENST00000497784 RLFQ13129 1914 aa10.99□□□□□ -0.65
BRAF-205ENST00000497784 CLTBP09497 229 aa10.99□□□□□ -0.65
BRAF-205ENST00000497784 RAG1P15918 1043 aa10.99□□□□□ -0.65
BRAF-205ENST00000497784 CCND3P30281 292 aaPredicted RBP10.99□□□□□ -0.65
BRAF-205ENST00000497784 NUBP1P53384 320 aa10.99□□□□□ -0.65
BRAF-205ENST00000497784 PROSER3Q2NL68 480 aa10.99□□□□□ -0.65
BRAF-205ENST00000497784 TRIM60Q495X7 471 aa10.99□□□□□ -0.65
BRAF-205ENST00000497784 MFSD14CQ5VZR4 134 aa10.99□□□□□ -0.65
BRAF-205ENST00000497784 FAM178BQ8IXR5 827 aa10.99□□□□□ -0.65
BRAF-205ENST00000497784 USP6NLQ92738 828 aa10.99□□□□□ -0.65
BRAF-205ENST00000497784 PHOX2BQ99453 314 aa10.99□□□□□ -0.65
BRAF-205ENST00000497784 UTYO14607 1347 aa10.99□□□□□ -0.65
BRAF-205ENST00000497784 ZNF521Q96K83 1311 aa10.99□□□□□ -0.65
BRAF-205ENST00000497784 FRMPD3Q5JV73 1810 aa10.98□□□□□ -0.65
BRAF-205ENST00000497784 ATRNL1Q5VV63 1379 aa10.98□□□□□ -0.65
BRAF-205ENST00000497784 PSRC1Q6PGN9 363 aaPredicted RBP10.98□□□□□ -0.65
BRAF-205ENST00000497784 GADL1Q6ZQY3 521 aa10.98□□□□□ -0.65
BRAF-205ENST00000497784 CD320Q9NPF0 282 aa10.98□□□□□ -0.65
BRAF-205ENST00000497784 F8W031 263 aaPredicted RBP10.97□□□□□ -0.65
BRAF-205ENST00000497784 CYP2B6P20813 491 aa10.97□□□□□ -0.65
BRAF-205ENST00000497784 INPP5BP32019 993 aa10.97□□□□□ -0.65
BRAF-205ENST00000497784 AIMP1Q12904 312 aaKnown RBP10.97□□□□□ -0.65
BRAF-205ENST00000497784 PROCA1Q8NCQ7 364 aaPredicted RBP10.97□□□□□ -0.65
BRAF-205ENST00000497784 APBA2Q99767 749 aa10.97□□□□□ -0.65
BRAF-205ENST00000497784 TBC1D2Q9BYX2 928 aa10.97□□□□□ -0.65
BRAF-205ENST00000497784 MIS18AQ9NYP9 233 aa10.97□□□□□ -0.65
BRAF-205ENST00000497784 MTCH2Q9Y6C9 303 aa10.97□□□□□ -0.65
BRAF-205ENST00000497784 CENPFP49454 3210 aa10.97□□□□□ -0.65
BRAF-205ENST00000497784 MAPK4P31152 587 aa10.97□□□□□ -0.65
BRAF-205ENST00000497784 EPHA10Q5JZY3 1008 aa10.97□□□□□ -0.65
BRAF-205ENST00000497784 UPF3BQ9BZI7 483 aaKnown RBP10.97□□□□□ -0.65
BRAF-205ENST00000497784 AFG3L2Q9Y4W6 797 aa10.97□□□□□ -0.65
BRAF-205ENST00000497784 PLXNB2O15031 1838 aa10.96□□□□□ -0.65
BRAF-205ENST00000497784 PBX2P40425 430 aa10.96□□□□□ -0.65
BRAF-205ENST00000497784 CRKP46108 304 aa10.96□□□□□ -0.65
BRAF-205ENST00000497784 SH3RF1Q7Z6J0 888 aa10.96□□□□□ -0.65
BRAF-205ENST00000497784 TOX2Q96NM4 488 aa10.96□□□□□ -0.65
BRAF-205ENST00000497784 NKX2-4Q9H2Z4 354 aa10.96□□□□□ -0.65
BRAF-205ENST00000497784 NUDCQ9Y266 331 aa10.96□□□□□ -0.65
BRAF-205ENST00000497784 IGHMBP2P38935 993 aaKnown RBP10.96□□□□□ -0.66
BRAF-205ENST00000497784 KCNJ4P48050 445 aa10.96□□□□□ -0.66
BRAF-205ENST00000497784 ACAP1Q15027 740 aa10.96□□□□□ -0.66
BRAF-205ENST00000497784 CCDC191Q8NCU4 936 aa10.96□□□□□ -0.66
BRAF-205ENST00000497784 GTF3C2Q8WUA4 911 aaPredicted RBP10.96□□□□□ -0.66
BRAF-205ENST00000497784 LMCD1Q9NZU5 365 aa10.96□□□□□ -0.66
BRAF-205ENST00000497784 PKD1L2Q7Z442 2459 aa10.96□□□□□ -0.66
BRAF-205ENST00000497784 DCTN1Q14203 1278 aa10.95□□□□□ -0.66
BRAF-205ENST00000497784 LEXMQ3ZCV2 418 aa10.95□□□□□ -0.66
BRAF-205ENST00000497784 SCYL3Q8IZE3 742 aa10.95□□□□□ -0.66
BRAF-205ENST00000497784 PICK1Q9NRD5 415 aa10.95□□□□□ -0.66
BRAF-205ENST00000497784 TTF2Q9UNY4 1162 aaKnown RBP10.95□□□□□ -0.66
BRAF-205ENST00000497784 VCANP13611 3396 aa10.95□□□□□ -0.66
BRAF-205ENST00000497784 EIF2S2P20042 333 aaKnown RBP10.95□□□□□ -0.66
BRAF-205ENST00000497784 TLE2Q04725 743 aa10.95□□□□□ -0.66
BRAF-205ENST00000497784 MAP2K5Q13163 448 aa10.95□□□□□ -0.66
BRAF-205ENST00000497784 TMEM240Q5SV17 173 aa10.95□□□□□ -0.66
BRAF-205ENST00000497784 MICALL1Q8N3F8 863 aa10.95□□□□□ -0.66
BRAF-205ENST00000497784 FAM151AQ8WW52 585 aa10.95□□□□□ -0.66
BRAF-205ENST00000497784 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.95□□□□□ -0.66
BRAF-205ENST00000497784 PCDHA11Q9Y5I1 949 aa10.95□□□□□ -0.66
BRAF-205ENST00000497784 A0A0G2JMZ2 1700 aa10.94□□□□□ -0.66
BRAF-205ENST00000497784 PLXNA1Q9UIW2 1896 aa10.94□□□□□ -0.66
BRAF-205ENST00000497784 PRKAG3Q9UGI9 489 aa10.94□□□□□ -0.66
BRAF-205ENST00000497784 DOCK3Q8IZD9 2030 aa10.94□□□□□ -0.66
BRAF-205ENST00000497784 TIMP1P01033 207 aa10.93□□□□□ -0.66
BRAF-205ENST00000497784 SSTR3P32745 418 aaPredicted RBP10.93□□□□□ -0.66
BRAF-205ENST00000497784 MORN1Q5T089 497 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms