RNA–Protein interactions for RNA: ENST00000497703.1

GARNL3-221, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-221ENST00000497703 REC114Q7Z4M0 266 aa11.02□□□□□ -0.65
GARNL3-221ENST00000497703 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.02□□□□□ -0.65
GARNL3-221ENST00000497703 WDR18Q9BV38 432 aa11.02□□□□□ -0.65
GARNL3-221ENST00000497703 TMPRSS13Q9BYE2 586 aa11.02□□□□□ -0.65
GARNL3-221ENST00000497703 PPP1R1BQ9UD71 204 aaPredicted RBP11.02□□□□□ -0.65
GARNL3-221ENST00000497703 PRKAG2Q9UGJ0 569 aa11.02□□□□□ -0.65
GARNL3-221ENST00000497703 WISP1O95388 367 aa11.01□□□□□ -0.65
GARNL3-221ENST00000497703 ATP2B1P20020 1258 aa11.01□□□□□ -0.65
GARNL3-221ENST00000497703 ID3Q02535 119 aa11.01□□□□□ -0.65
GARNL3-221ENST00000497703 ANKRD34AQ69YU3 496 aa11.01□□□□□ -0.65
GARNL3-221ENST00000497703 KIAA1211Q6ZU35 1233 aa11.01□□□□□ -0.65
GARNL3-221ENST00000497703 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.01□□□□□ -0.65
GARNL3-221ENST00000497703 TMEM130Q8N3G9 435 aa11.01□□□□□ -0.65
GARNL3-221ENST00000497703 C12orf50Q8NA57 414 aaPredicted RBP11.01□□□□□ -0.65
GARNL3-221ENST00000497703 CPLX3Q8WVH0 158 aa11.01□□□□□ -0.65
GARNL3-221ENST00000497703 LENG1Q96BZ8 264 aaPredicted RBP11.01□□□□□ -0.65
GARNL3-221ENST00000497703 CEP41Q9BYV8 373 aa11.01□□□□□ -0.65
GARNL3-221ENST00000497703 AP4E1Q9UPM8 1137 aa11.01□□□□□ -0.65
GARNL3-221ENST00000497703 EFR3BQ9Y2G0 817 aa11.01□□□□□ -0.65
GARNL3-221ENST00000497703 SART1O43290 800 aaKnown RBP11□□□□□ -0.65
GARNL3-221ENST00000497703 DLGAP3O95886 979 aa11□□□□□ -0.65
GARNL3-221ENST00000497703 SSBP05455 408 aaKnown RBP eCLIP11□□□□□ -0.65
GARNL3-221ENST00000497703 ATF4P18848 351 aaPredicted RBP11□□□□□ -0.65
GARNL3-221ENST00000497703 PTPN11Q06124 597 aaPredicted RBP11□□□□□ -0.65
GARNL3-221ENST00000497703 MLECQ14165 292 aa11□□□□□ -0.65
GARNL3-221ENST00000497703 SHISA2Q6UWI4 295 aa11□□□□□ -0.65
GARNL3-221ENST00000497703 SLITRK4Q8IW52 837 aa11□□□□□ -0.65
GARNL3-221ENST00000497703 AKTIPQ9H8T0 292 aa11□□□□□ -0.65
GARNL3-221ENST00000497703 SUGCTQ9HAC7 445 aa11□□□□□ -0.65
GARNL3-221ENST00000497703 STRIP2Q9ULQ0 834 aa11□□□□□ -0.65
GARNL3-221ENST00000497703 CRKP46108 304 aa10.99□□□□□ -0.65
GARNL3-221ENST00000497703 PDE4BQ07343 736 aa10.99□□□□□ -0.65
GARNL3-221ENST00000497703 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.99□□□□□ -0.65
GARNL3-221ENST00000497703 SMG8Q8ND04 991 aaKnown RBP10.99□□□□□ -0.65
GARNL3-221ENST00000497703 FBXO27Q8NI29 283 aa10.99□□□□□ -0.65
GARNL3-221ENST00000497703 WDR89Q96FK6 387 aaPredicted RBP10.99□□□□□ -0.65
GARNL3-221ENST00000497703 PLPPR2Q96GM1 343 aa10.99□□□□□ -0.65
GARNL3-221ENST00000497703 GMLQ99445 158 aa10.99□□□□□ -0.65
GARNL3-221ENST00000497703 F8W735 103 aaPredicted RBP10.98□□□□□ -0.65
GARNL3-221ENST00000497703 GLB1P16278 677 aa10.98□□□□□ -0.65
GARNL3-221ENST00000497703 NASPP49321 788 aaPredicted RBP10.98□□□□□ -0.65
GARNL3-221ENST00000497703 FERD3LQ96RJ6 166 aa10.98□□□□□ -0.65
GARNL3-221ENST00000497703 ATXN3LQ9H3M9 355 aa10.98□□□□□ -0.65
GARNL3-221ENST00000497703 TACC3Q9Y6A5 838 aa10.98□□□□□ -0.65
GARNL3-221ENST00000497703 PRAMEF27A3QJZ7 478 aa10.97□□□□□ -0.65
GARNL3-221ENST00000497703 DCDC2CA8MYV0 355 aa10.97□□□□□ -0.65
GARNL3-221ENST00000497703 IMPDH2P12268 514 aa10.97□□□□□ -0.65
GARNL3-221ENST00000497703 SELPP16109 830 aa10.97□□□□□ -0.65
GARNL3-221ENST00000497703 ERVK-24P63145 666 aa10.97□□□□□ -0.65
GARNL3-221ENST00000497703 ZC3H12AQ5D1E8 599 aaKnown RBP10.97□□□□□ -0.65
GARNL3-221ENST00000497703 LRFN4Q6PJG9 635 aa10.97□□□□□ -0.65
GARNL3-221ENST00000497703 REXO1Q8N1G1 1221 aaKnown RBP10.97□□□□□ -0.65
GARNL3-221ENST00000497703 CRBNQ96SW2 442 aa10.97□□□□□ -0.65
GARNL3-221ENST00000497703 PIDD1Q9HB75 910 aa10.97□□□□□ -0.65
GARNL3-221ENST00000497703 BRMS1Q9HCU9 246 aa10.97□□□□□ -0.65
GARNL3-221ENST00000497703 GINM1Q9NU53 330 aa10.97□□□□□ -0.65
GARNL3-221ENST00000497703 GAS2O43903 313 aaKnown RBP10.96□□□□□ -0.65
GARNL3-221ENST00000497703 ADH5P11766 374 aa10.96□□□□□ -0.65
GARNL3-221ENST00000497703 SOX9P48436 509 aa10.96□□□□□ -0.65
GARNL3-221ENST00000497703 SOX4Q06945 474 aaPredicted RBP10.96□□□□□ -0.65
GARNL3-221ENST00000497703 INPP5AQ14642 412 aa10.96□□□□□ -0.65
GARNL3-221ENST00000497703 FBXW10Q5XX13 1052 aa10.96□□□□□ -0.65
GARNL3-221ENST00000497703 DYMQ7RTS9 669 aa10.96□□□□□ -0.65
GARNL3-221ENST00000497703 AGGF1Q8N302 714 aaeCLIP10.96□□□□□ -0.65
GARNL3-221ENST00000497703 CSADQ9Y600 493 aa10.96□□□□□ -0.65
GARNL3-221ENST00000497703 COL8A1P27658 744 aa10.95□□□□□ -0.66
GARNL3-221ENST00000497703 ETF1P62495 437 aaKnown RBP10.95□□□□□ -0.66
GARNL3-221ENST00000497703 GK5Q6ZS86 529 aa10.95□□□□□ -0.66
GARNL3-221ENST00000497703 C12orf40Q86WS4 652 aa10.95□□□□□ -0.66
GARNL3-221ENST00000497703 TMPRSS2O15393 492 aa10.94□□□□□ -0.66
GARNL3-221ENST00000497703 GRIN3BO60391 1043 aa10.94□□□□□ -0.66
GARNL3-221ENST00000497703 UBXN4Q92575 508 aa10.94□□□□□ -0.66
GARNL3-221ENST00000497703 YIPF2Q9BWQ6 316 aa10.94□□□□□ -0.66
GARNL3-221ENST00000497703 SSU72Q9NP77 194 aaKnown RBP10.94□□□□□ -0.66
GARNL3-221ENST00000497703 CRIM1Q9NZV1 1036 aa10.94□□□□□ -0.66
GARNL3-221ENST00000497703 STK17AQ9UEE5 414 aa10.94□□□□□ -0.66
GARNL3-221ENST00000497703 PCDHB14Q9Y5E9 798 aa10.94□□□□□ -0.66
GARNL3-221ENST00000497703 GFRA2O00451 464 aa10.93□□□□□ -0.66
GARNL3-221ENST00000497703 FANCGO15287 622 aa10.93□□□□□ -0.66
GARNL3-221ENST00000497703 GTF2F1P35269 517 aaKnown RBP eCLIP10.93□□□□□ -0.66
GARNL3-221ENST00000497703 USP11P51784 963 aa10.93□□□□□ -0.66
GARNL3-221ENST00000497703 CDC37L1Q7L3B6 337 aa10.93□□□□□ -0.66
GARNL3-221ENST00000497703 CYFIP1Q7L576 1253 aa10.93□□□□□ -0.66
GARNL3-221ENST00000497703 ARMC5Q96C12 935 aa10.93□□□□□ -0.66
GARNL3-221ENST00000497703 SRRTQ9BXP5 876 aaKnown RBP10.93□□□□□ -0.66
GARNL3-221ENST00000497703 PPP1R9AQ9ULJ8 1098 aa10.93□□□□□ -0.66
GARNL3-221ENST00000497703 HIF3AQ9Y2N7 669 aa10.93□□□□□ -0.66
GARNL3-221ENST00000497703 STK10O94804 968 aaKnown RBP10.92□□□□□ -0.66
GARNL3-221ENST00000497703 ALX3O95076 343 aa10.92□□□□□ -0.66
GARNL3-221ENST00000497703 FGRP09769 529 aa10.92□□□□□ -0.66
GARNL3-221ENST00000497703 ASPAP45381 313 aa10.92□□□□□ -0.66
GARNL3-221ENST00000497703 IREB2P48200 963 aaKnown RBP10.92□□□□□ -0.66
GARNL3-221ENST00000497703 LRRFIP1Q32MZ4 808 aaKnown RBP10.92□□□□□ -0.66
GARNL3-221ENST00000497703 KCT2Q8NC54 265 aa10.92□□□□□ -0.66
GARNL3-221ENST00000497703 WFDC12Q8WWY7 111 aa10.92□□□□□ -0.66
GARNL3-221ENST00000497703 PCDHGC5Q9Y5F6 944 aa10.92□□□□□ -0.66
GARNL3-221ENST00000497703 RNGTTO60942 597 aaKnown RBP10.91□□□□□ -0.66
GARNL3-221ENST00000497703 TIAF1O95411 115 aa10.91□□□□□ -0.66
GARNL3-221ENST00000497703 DRD2P14416 443 aa10.91□□□□□ -0.66
GARNL3-221ENST00000497703 PLCG1P19174 1290 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms