RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 EMILIN2Q9BXX0 1053 aa6.79□□□□□ -1.32
CBX3-208ENST00000497498 PCOLCE2Q9UKZ9 415 aa6.79□□□□□ -1.32
CBX3-208ENST00000497498 RNGTTO60942 597 aaKnown RBP6.78□□□□□ -1.32
CBX3-208ENST00000497498 NEFMP07197 916 aa6.78□□□□□ -1.32
CBX3-208ENST00000497498 HCLS1P14317 486 aaPredicted RBP6.78□□□□□ -1.32
CBX3-208ENST00000497498 GSTT1P30711 240 aa6.78□□□□□ -1.32
CBX3-208ENST00000497498 MAP1SQ66K74 1059 aaPredicted RBP6.78□□□□□ -1.32
CBX3-208ENST00000497498 WFDC3Q8IUB2 231 aa6.78□□□□□ -1.32
CBX3-208ENST00000497498 ZSCAN29Q8IWY8 852 aaPredicted RBP6.78□□□□□ -1.32
CBX3-208ENST00000497498 STK11IPQ8N1F8 1099 aa6.78□□□□□ -1.32
CBX3-208ENST00000497498 ANKRD24Q8TF21 1146 aa6.78□□□□□ -1.32
CBX3-208ENST00000497498 ASB16Q96NS5 453 aa6.78□□□□□ -1.32
CBX3-208ENST00000497498 PPM1HQ9ULR3 514 aa6.78□□□□□ -1.32
CBX3-208ENST00000497498 SLC5A6Q9Y289 635 aa6.78□□□□□ -1.32
CBX3-208ENST00000497498 ENC1O14682 589 aa6.77□□□□□ -1.33
CBX3-208ENST00000497498 GIPC1O14908 333 aa6.77□□□□□ -1.33
CBX3-208ENST00000497498 ITGB5P18084 799 aa6.77□□□□□ -1.33
CBX3-208ENST00000497498 BMP6P22004 513 aa6.77□□□□□ -1.33
CBX3-208ENST00000497498 RNF214Q8ND24 703 aa6.77□□□□□ -1.33
CBX3-208ENST00000497498 GPBAR1Q8TDU6 330 aa6.77□□□□□ -1.33
CBX3-208ENST00000497498 ISL2Q96A47 359 aa6.77□□□□□ -1.33
CBX3-208ENST00000497498 MISP3Q96FF7 219 aa6.77□□□□□ -1.33
CBX3-208ENST00000497498 DUSP23Q9BVJ7 150 aa6.77□□□□□ -1.33
CBX3-208ENST00000497498 OSBPL7Q9BZF2 842 aa6.77□□□□□ -1.33
CBX3-208ENST00000497498 CEP44Q9C0F1 390 aa6.77□□□□□ -1.33
CBX3-208ENST00000497498 MAPK8P45983 427 aa6.76□□□□□ -1.33
CBX3-208ENST00000497498 KCNA1Q09470 495 aa6.76□□□□□ -1.33
CBX3-208ENST00000497498 ALG1LQ6GMV1 187 aa6.76□□□□□ -1.33
CBX3-208ENST00000497498 SPRED2Q7Z698 418 aa6.76□□□□□ -1.33
CBX3-208ENST00000497498 NETO1Q8TDF5 533 aa6.76□□□□□ -1.33
CBX3-208ENST00000497498 SETDB2Q96T68 719 aa6.76□□□□□ -1.33
CBX3-208ENST00000497498 MKNK2Q9HBH9 465 aa6.76□□□□□ -1.33
CBX3-208ENST00000497498 IVNS1ABPQ9Y6Y0 642 aa6.76□□□□□ -1.33
CBX3-208ENST00000497498 PAGE1O75459 146 aa6.75□□□□□ -1.33
CBX3-208ENST00000497498 LEFTY1O75610 366 aa6.75□□□□□ -1.33
CBX3-208ENST00000497498 MPRIPQ6WCQ1 1025 aa6.75□□□□□ -1.33
CBX3-208ENST00000497498 TPTE2Q6XPS3 522 aa6.75□□□□□ -1.33
CBX3-208ENST00000497498 PLD6Q8N2A8 252 aaKnown RBP6.75□□□□□ -1.33
CBX3-208ENST00000497498 FAM181AQ8N9Y4 354 aa6.75□□□□□ -1.33
CBX3-208ENST00000497498 GRIN3AQ8TCU5 1115 aa6.75□□□□□ -1.33
CBX3-208ENST00000497498 U3KQE9 123 aa6.75□□□□□ -1.33
CBX3-208ENST00000497498 TRIM37O94972 964 aa6.74□□□□□ -1.33
CBX3-208ENST00000497498 JUNBP17275 347 aaPredicted RBP6.74□□□□□ -1.33
CBX3-208ENST00000497498 NTF4P34130 210 aa6.74□□□□□ -1.33
CBX3-208ENST00000497498 RING1Q06587 406 aa6.74□□□□□ -1.33
CBX3-208ENST00000497498 SCARA3Q6AZY7 606 aa6.74□□□□□ -1.33
CBX3-208ENST00000497498 ZNF574Q6ZN55 896 aaPredicted RBP6.74□□□□□ -1.33
CBX3-208ENST00000497498 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.74□□□□□ -1.33
CBX3-208ENST00000497498 CBX8Q9HC52 389 aa6.74□□□□□ -1.33
CBX3-208ENST00000497498 WWC3Q9ULE0 1092 aa6.74□□□□□ -1.33
CBX3-208ENST00000497498 SAMM50Q9Y512 469 aa6.74□□□□□ -1.33
CBX3-208ENST00000497498 OXCT1P55809 520 aa6.73□□□□□ -1.33
CBX3-208ENST00000497498 ACSBG1Q96GR2 724 aa6.73□□□□□ -1.33
CBX3-208ENST00000497498 VAV3Q9UKW4 847 aa6.73□□□□□ -1.33
CBX3-208ENST00000497498 FBXO24O75426 580 aa6.72□□□□□ -1.33
CBX3-208ENST00000497498 PRKCQQ04759 706 aa6.72□□□□□ -1.33
CBX3-208ENST00000497498 BNIP3Q12983 259 aa6.72□□□□□ -1.33
CBX3-208ENST00000497498 LRRC14Q15048 493 aa6.72□□□□□ -1.33
CBX3-208ENST00000497498 IFI16Q16666 785 aaKnown RBP6.72□□□□□ -1.33
CBX3-208ENST00000497498 PPM1JQ5JR12 505 aa6.72□□□□□ -1.33
CBX3-208ENST00000497498 RASIP1Q5U651 963 aa6.72□□□□□ -1.33
CBX3-208ENST00000497498 FAM214BQ7L5A3 538 aa6.72□□□□□ -1.33
CBX3-208ENST00000497498 ASIC4Q96FT7 647 aa6.72□□□□□ -1.33
CBX3-208ENST00000497498 SSU72Q9NP77 194 aaKnown RBP6.72□□□□□ -1.33
CBX3-208ENST00000497498 SPG7Q9UQ90 795 aa6.72□□□□□ -1.33
CBX3-208ENST00000497498 FANCGO15287 622 aa6.71□□□□□ -1.34
CBX3-208ENST00000497498 YBX3P16989 372 aaKnown RBP eCLIP6.71□□□□□ -1.34
CBX3-208ENST00000497498 ATP2B2Q01814 1243 aa6.71□□□□□ -1.34
CBX3-208ENST00000497498 PLCL1Q15111 1095 aa6.71□□□□□ -1.34
CBX3-208ENST00000497498 ZNF792Q3KQV3 632 aa6.71□□□□□ -1.34
CBX3-208ENST00000497498 LLGL2Q6P1M3 1020 aa6.71□□□□□ -1.34
CBX3-208ENST00000497498 TOP6BLQ8N6T0 577 aa6.71□□□□□ -1.34
CBX3-208ENST00000497498 HEXIM2Q96MH2 286 aaKnown RBP6.71□□□□□ -1.34
CBX3-208ENST00000497498 KRTAP9-9Q9BYP9 154 aa6.71□□□□□ -1.34
CBX3-208ENST00000497498 KRTAP9-4Q9BYQ2 154 aa6.71□□□□□ -1.34
CBX3-208ENST00000497498 C12orf49Q9H741 205 aa6.71□□□□□ -1.34
CBX3-208ENST00000497498 FAM8A1Q9UBU6 413 aa6.71□□□□□ -1.34
CBX3-208ENST00000497498 CYP8B1Q9UNU6 501 aa6.71□□□□□ -1.34
CBX3-208ENST00000497498 PLAGL2Q9UPG8 496 aa6.71□□□□□ -1.34
CBX3-208ENST00000497498 PAPLNO95428 1278 aa6.7□□□□□ -1.34
CBX3-208ENST00000497498 CEACAM5P06731 702 aa6.7□□□□□ -1.34
CBX3-208ENST00000497498 P4HBP07237 508 aaKnown RBP6.7□□□□□ -1.34
CBX3-208ENST00000497498 CD8BP10966 210 aa6.7□□□□□ -1.34
CBX3-208ENST00000497498 FUT4P22083 530 aa6.7□□□□□ -1.34
CBX3-208ENST00000497498 ZBTB37Q5TC79 503 aa6.7□□□□□ -1.34
CBX3-208ENST00000497498 TNKS2Q9H2K2 1166 aa6.7□□□□□ -1.34
CBX3-208ENST00000497498 CSADQ9Y600 493 aa6.7□□□□□ -1.34
CBX3-208ENST00000497498 TMEM265A0A087WTH1 108 aa6.69□□□□□ -1.34
CBX3-208ENST00000497498 DCDC2CA8MYV0 355 aa6.69□□□□□ -1.34
CBX3-208ENST00000497498 IGF2BP3O00425 579 aaKnown RBP eCLIP6.69□□□□□ -1.34
CBX3-208ENST00000497498 CELA3AP09093 270 aa6.69□□□□□ -1.34
CBX3-208ENST00000497498 PCNX4Q63HM2 1172 aa6.69□□□□□ -1.34
CBX3-208ENST00000497498 UBE3DQ7Z6J8 389 aa6.69□□□□□ -1.34
CBX3-208ENST00000497498 C12orf40Q86WS4 652 aa6.69□□□□□ -1.34
CBX3-208ENST00000497498 FRMD6Q96NE9 622 aa6.69□□□□□ -1.34
CBX3-208ENST00000497498 TRAIPQ9BWF2 469 aa6.69□□□□□ -1.34
CBX3-208ENST00000497498 PRDM10Q9NQV6 1147 aa6.69□□□□□ -1.34
CBX3-208ENST00000497498 PCDHA4Q9UN74 947 aa6.69□□□□□ -1.34
CBX3-208ENST00000497498 BTBD11A6QL63 1104 aa6.68□□□□□ -1.34
CBX3-208ENST00000497498 USP17L7P0C7H9 530 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms