RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-208ENST00000496852 MAPKAPK5Q8IW41 473 aa16.68■□□□□ 0.26
ATPAF2-208ENST00000496852 TAF1DQ9H5J8 278 aaPredicted RBP16.68■□□□□ 0.26
ATPAF2-208ENST00000496852 UPF2Q9HAU5 1272 aaKnown RBP16.68■□□□□ 0.26
ATPAF2-208ENST00000496852 FAM198AQ9UFP1 575 aa16.68■□□□□ 0.26
ATPAF2-208ENST00000496852 COL2A1P02458 1487 aaPredicted RBP16.67■□□□□ 0.26
ATPAF2-208ENST00000496852 NACAP1Q9BZK3 213 aa16.67■□□□□ 0.26
ATPAF2-208ENST00000496852 TSHZ2Q9NRE2 1034 aa16.67■□□□□ 0.26
ATPAF2-208ENST00000496852 TMOD2Q9NZR1 351 aa16.67■□□□□ 0.26
ATPAF2-208ENST00000496852 RBM8AQ9Y5S9 174 aaKnown RBP16.67■□□□□ 0.26
ATPAF2-208ENST00000496852 PICALMQ13492 652 aa16.66■□□□□ 0.26
ATPAF2-208ENST00000496852 NAPBQ9H115 298 aa16.66■□□□□ 0.26
ATPAF2-208ENST00000496852 U3KPZ7 1027 aaPredicted RBP16.66■□□□□ 0.26
ATPAF2-208ENST00000496852 CNTNAP1P78357 1384 aa16.66■□□□□ 0.26
ATPAF2-208ENST00000496852 ENTPD3O75355 529 aa16.65■□□□□ 0.26
ATPAF2-208ENST00000496852 TDO2P48775 406 aa16.65■□□□□ 0.26
ATPAF2-208ENST00000496852 NECTIN1Q15223 517 aa16.65■□□□□ 0.26
ATPAF2-208ENST00000496852 DDRGK1Q96HY6 314 aa16.65■□□□□ 0.26
ATPAF2-208ENST00000496852 OSBPL5Q9H0X9 879 aaPredicted RBP16.65■□□□□ 0.26
ATPAF2-208ENST00000496852 RRAGCQ9HB90 399 aa16.65■□□□□ 0.26
ATPAF2-208ENST00000496852 TCP10L2B9ZVM9 353 aa16.65■□□□□ 0.26
ATPAF2-208ENST00000496852 VEGFAP15692 232 aaPredicted RBP16.65■□□□□ 0.26
ATPAF2-208ENST00000496852 SBK1Q52WX2 424 aa16.65■□□□□ 0.26
ATPAF2-208ENST00000496852 ANGEL2Q5VTE6 544 aaKnown RBP16.65■□□□□ 0.26
ATPAF2-208ENST00000496852 CTR9Q6PD62 1173 aa16.65■□□□□ 0.26
ATPAF2-208ENST00000496852 FAM83AQ86UY5 434 aa16.65■□□□□ 0.26
ATPAF2-208ENST00000496852 VEZTQ9HBM0 779 aa16.65■□□□□ 0.26
ATPAF2-208ENST00000496852 GGA3Q9NZ52 723 aa16.65■□□□□ 0.26
ATPAF2-208ENST00000496852 ARPP21Q9UBL0 812 aaPredicted RBP16.65■□□□□ 0.26
ATPAF2-208ENST00000496852 PITPNM2Q9BZ72 1349 aa16.64■□□□□ 0.25
ATPAF2-208ENST00000496852 USP17L12C9JPN9 530 aa16.64■□□□□ 0.25
ATPAF2-208ENST00000496852 USP17L21D6R901 530 aa16.64■□□□□ 0.25
ATPAF2-208ENST00000496852 HSPA4P34932 840 aa16.64■□□□□ 0.25
ATPAF2-208ENST00000496852 PNMA8AQ86V59 439 aaPredicted RBP16.64■□□□□ 0.25
ATPAF2-208ENST00000496852 ZFPM1Q8IX07 1006 aa16.64■□□□□ 0.25
ATPAF2-208ENST00000496852 FAM151AQ8WW52 585 aa16.64■□□□□ 0.25
ATPAF2-208ENST00000496852 NMRK2Q9NPI5 230 aa16.64■□□□□ 0.25
ATPAF2-208ENST00000496852 MCM9Q9NXL9 1143 aa16.64■□□□□ 0.25
ATPAF2-208ENST00000496852 CTNNA3Q9UI47 895 aa16.64■□□□□ 0.25
ATPAF2-208ENST00000496852 ATRNL1Q5VV63 1379 aa16.64■□□□□ 0.25
ATPAF2-208ENST00000496852 ATAD5Q96QE3 1844 aa16.63■□□□□ 0.25
ATPAF2-208ENST00000496852 TCP10Q12799 353 aa16.63■□□□□ 0.25
ATPAF2-208ENST00000496852 TNFAIP1Q13829 316 aa16.63■□□□□ 0.25
ATPAF2-208ENST00000496852 APOBEC3FQ8IUX4 373 aaKnown RBP16.63■□□□□ 0.25
ATPAF2-208ENST00000496852 ZC3H15Q8WU90 426 aaKnown RBP16.63■□□□□ 0.25
ATPAF2-208ENST00000496852 PGAP2Q9UHJ9 254 aa16.63■□□□□ 0.25
ATPAF2-208ENST00000496852 SAP30BPQ9UHR5 308 aaKnown RBP16.63■□□□□ 0.25
ATPAF2-208ENST00000496852 CYP21A2P08686 494 aa16.62■□□□□ 0.25
ATPAF2-208ENST00000496852 TNNI2P48788 182 aa16.62■□□□□ 0.25
ATPAF2-208ENST00000496852 SH3BP5LQ7L8J4 393 aa16.62■□□□□ 0.25
ATPAF2-208ENST00000496852 ZNF526Q8TF50 670 aaPredicted RBP16.62■□□□□ 0.25
ATPAF2-208ENST00000496852 KCNB2Q92953 911 aa16.62■□□□□ 0.25
ATPAF2-208ENST00000496852 PALD1Q9ULE6 856 aa16.62■□□□□ 0.25
ATPAF2-208ENST00000496852 CYP2D7A0A087X1C5 515 aa16.62■□□□□ 0.25
ATPAF2-208ENST00000496852 DDTLA6NHG4 134 aaPredicted RBP16.62■□□□□ 0.25
ATPAF2-208ENST00000496852 SLC27A2O14975 620 aa16.62■□□□□ 0.25
ATPAF2-208ENST00000496852 CYP2D6P10635 497 aa16.62■□□□□ 0.25
ATPAF2-208ENST00000496852 EVX2Q03828 476 aa16.62■□□□□ 0.25
ATPAF2-208ENST00000496852 C12orf60Q5U649 245 aa16.62■□□□□ 0.25
ATPAF2-208ENST00000496852 CREB3L3Q68CJ9 461 aa16.62■□□□□ 0.25
ATPAF2-208ENST00000496852 ANAPC4Q9UJX5 808 aa16.62■□□□□ 0.25
ATPAF2-208ENST00000496852 SCAF8Q9UPN6 1271 aaKnown RBP16.62■□□□□ 0.25
ATPAF2-208ENST00000496852 ROBO3Q96MS0 1386 aa16.62■□□□□ 0.25
ATPAF2-208ENST00000496852 TRPM7Q96QT4 1865 aa16.61■□□□□ 0.25
ATPAF2-208ENST00000496852 SMIM22K7EJ46 135 aa16.61■□□□□ 0.25
ATPAF2-208ENST00000496852 PLCD1P51178 756 aa16.61■□□□□ 0.25
ATPAF2-208ENST00000496852 PPARAQ07869 468 aa16.61■□□□□ 0.25
ATPAF2-208ENST00000496852 RASA3Q14644 834 aa16.61■□□□□ 0.25
ATPAF2-208ENST00000496852 IMMTQ16891 758 aaKnown RBP16.61■□□□□ 0.25
ATPAF2-208ENST00000496852 EAPPQ56P03 285 aaPredicted RBP16.61■□□□□ 0.25
ATPAF2-208ENST00000496852 NBPF3Q9H094 633 aa16.61■□□□□ 0.25
ATPAF2-208ENST00000496852 DHX36Q9H2U1 1008 aaKnown RBP16.61■□□□□ 0.25
ATPAF2-208ENST00000496852 MINDY4BA8MYZ0 360 aa16.6■□□□□ 0.25
ATPAF2-208ENST00000496852 ZNF213O14771 459 aa16.6■□□□□ 0.25
ATPAF2-208ENST00000496852 POLR3DP05423 398 aaPredicted RBP16.6■□□□□ 0.25
ATPAF2-208ENST00000496852 POTEIP0CG38 1075 aa16.6■□□□□ 0.25
ATPAF2-208ENST00000496852 POTEJP0CG39 1038 aa16.6■□□□□ 0.25
ATPAF2-208ENST00000496852 MCCP23508 829 aa16.6■□□□□ 0.25
ATPAF2-208ENST00000496852 RBM25P49756 843 aaKnown RBP16.6■□□□□ 0.25
ATPAF2-208ENST00000496852 HAND2P61296 217 aa16.6■□□□□ 0.25
ATPAF2-208ENST00000496852 SLC4A8Q2Y0W8 1093 aa16.6■□□□□ 0.25
ATPAF2-208ENST00000496852 RNF20Q5VTR2 975 aa16.6■□□□□ 0.25
ATPAF2-208ENST00000496852 TTC6Q86TZ1 520 aa16.6■□□□□ 0.25
ATPAF2-208ENST00000496852 AMOTL1Q8IY63 956 aa16.6■□□□□ 0.25
ATPAF2-208ENST00000496852 DCPSQ96C86 337 aaKnown RBP16.6■□□□□ 0.25
ATPAF2-208ENST00000496852 TEPSINQ96N21 525 aa16.6■□□□□ 0.25
ATPAF2-208ENST00000496852 C22orf23Q9BZE7 217 aa16.6■□□□□ 0.25
ATPAF2-208ENST00000496852 TMEM39BQ9GZU3 492 aa16.6■□□□□ 0.25
ATPAF2-208ENST00000496852 TAF6LQ9Y6J9 622 aa16.6■□□□□ 0.25
ATPAF2-208ENST00000496852 GREB1LQ9C091 1923 aaPredicted RBP16.6■□□□□ 0.25
ATPAF2-208ENST00000496852 CTDSPL2Q05D32 466 aa16.59■□□□□ 0.25
ATPAF2-208ENST00000496852 RASEFQ8IZ41 740 aa16.59■□□□□ 0.25
ATPAF2-208ENST00000496852 TBC1D32Q96NH3 1257 aa16.59■□□□□ 0.25
ATPAF2-208ENST00000496852 DEFB129Q9H1M3 183 aa16.59■□□□□ 0.25
ATPAF2-208ENST00000496852 PPP2R3BQ9Y5P8 575 aa16.59■□□□□ 0.25
ATPAF2-208ENST00000496852 TSGA10IPQ3SY00 556 aa16.59■□□□□ 0.25
ATPAF2-208ENST00000496852 TBC1D10CQ8IV04 446 aa16.59■□□□□ 0.25
ATPAF2-208ENST00000496852 ZSCAN29Q8IWY8 852 aaPredicted RBP16.59■□□□□ 0.25
ATPAF2-208ENST00000496852 CDAN1Q8IWY9 1227 aa16.59■□□□□ 0.25
ATPAF2-208ENST00000496852 SNX14Q9Y5W7 946 aa16.59■□□□□ 0.25
ATPAF2-208ENST00000496852 TACC3Q9Y6A5 838 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms