RNA–Protein interactions for RNA: ENST00000496818.2

CACNA1C-229, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-229ENST00000496818 VASH1Q7L8A9 365 aaPredicted RBP7.4□□□□□ -1.22
CACNA1C-229ENST00000496818 C2orf69Q8N8R5 385 aa7.4□□□□□ -1.22
CACNA1C-229ENST00000496818 PLBD2Q8NHP8 589 aa7.4□□□□□ -1.22
CACNA1C-229ENST00000496818 DPF2Q92785 391 aa7.4□□□□□ -1.22
CACNA1C-229ENST00000496818 C1QTNF2Q9BXJ5 285 aa7.4□□□□□ -1.22
CACNA1C-229ENST00000496818 MCOLN1Q9GZU1 580 aa7.4□□□□□ -1.22
CACNA1C-229ENST00000496818 DBNDD1Q9H9R9 158 aa7.4□□□□□ -1.22
CACNA1C-229ENST00000496818 GBA2Q9HCG7 927 aaPredicted RBP7.4□□□□□ -1.22
CACNA1C-229ENST00000496818 SAGE1Q9NXZ1 904 aa7.4□□□□□ -1.22
CACNA1C-229ENST00000496818 DBF4Q9UBU7 674 aaPredicted RBP7.4□□□□□ -1.22
CACNA1C-229ENST00000496818 PGAP2Q9UHJ9 254 aa7.4□□□□□ -1.22
CACNA1C-229ENST00000496818 DOLKQ9UPQ8 538 aa7.4□□□□□ -1.22
CACNA1C-229ENST00000496818 LAS1LQ9Y4W2 734 aaKnown RBP7.4□□□□□ -1.22
CACNA1C-229ENST00000496818 LRRC37AA6NMS7 1700 aa7.39□□□□□ -1.23
CACNA1C-229ENST00000496818 MYBBP1AQ9BQG0 1328 aaKnown RBP7.39□□□□□ -1.23
CACNA1C-229ENST00000496818 PSMD14O00487 310 aa7.39□□□□□ -1.23
CACNA1C-229ENST00000496818 SLC19A1P41440 591 aa7.39□□□□□ -1.23
CACNA1C-229ENST00000496818 SF3B3Q15393 1217 aaKnown RBP7.39□□□□□ -1.23
CACNA1C-229ENST00000496818 EML3Q32P44 896 aa7.39□□□□□ -1.23
CACNA1C-229ENST00000496818 TBC1D10BQ4KMP7 808 aaPredicted RBP7.39□□□□□ -1.23
CACNA1C-229ENST00000496818 RGMBQ6NW40 437 aa7.39□□□□□ -1.23
CACNA1C-229ENST00000496818 TRAF7Q6Q0C0 670 aa7.39□□□□□ -1.23
CACNA1C-229ENST00000496818 KCTD15Q96SI1 283 aaPredicted RBP7.39□□□□□ -1.23
CACNA1C-229ENST00000496818 HYPKQ9NX55 129 aa7.39□□□□□ -1.23
CACNA1C-229ENST00000496818 GGA3Q9NZ52 723 aa7.39□□□□□ -1.23
CACNA1C-229ENST00000496818 SUPT16HQ9Y5B9 1047 aaKnown RBP7.39□□□□□ -1.23
CACNA1C-229ENST00000496818 PCDHB11Q9Y5F2 797 aa7.39□□□□□ -1.23
CACNA1C-229ENST00000496818 ADM5C9JUS6 153 aa7.38□□□□□ -1.23
CACNA1C-229ENST00000496818 IRS4O14654 1257 aaPredicted RBP7.38□□□□□ -1.23
CACNA1C-229ENST00000496818 UFL1O94874 794 aa7.38□□□□□ -1.23
CACNA1C-229ENST00000496818 RASA1P20936 1047 aa7.38□□□□□ -1.23
CACNA1C-229ENST00000496818 ZNF157P51786 506 aaPredicted RBP7.38□□□□□ -1.23
CACNA1C-229ENST00000496818 HIRAP54198 1017 aaPredicted RBP7.38□□□□□ -1.23
CACNA1C-229ENST00000496818 CALD1Q05682 793 aaKnown RBP7.38□□□□□ -1.23
CACNA1C-229ENST00000496818 NBPF20Q3BBV1 942 aa7.38□□□□□ -1.23
CACNA1C-229ENST00000496818 CCDC152Q4G0S7 254 aa7.38□□□□□ -1.23
CACNA1C-229ENST00000496818 USP48Q86UV5 1035 aa7.38□□□□□ -1.23
CACNA1C-229ENST00000496818 PLEKHM2Q8IWE5 1019 aa7.38□□□□□ -1.23
CACNA1C-229ENST00000496818 CCDC146Q8IYE0 955 aa7.38□□□□□ -1.23
CACNA1C-229ENST00000496818 CELF1Q92879 486 aaKnown RBP7.38□□□□□ -1.23
CACNA1C-229ENST00000496818 FAM89AQ96GI7 184 aa7.38□□□□□ -1.23
CACNA1C-229ENST00000496818 ZC3H12CQ9C0D7 883 aaKnown RBP7.38□□□□□ -1.23
CACNA1C-229ENST00000496818 PLA2G2EQ9NZK7 142 aa7.38□□□□□ -1.23
CACNA1C-229ENST00000496818 ANKIB1Q9P2G1 1089 aa7.38□□□□□ -1.23
CACNA1C-229ENST00000496818 ZNF609O15014 1411 aa7.37□□□□□ -1.23
CACNA1C-229ENST00000496818 RTL9Q8NET4 1388 aa7.37□□□□□ -1.23
CACNA1C-229ENST00000496818 NUP98P52948 1817 aa7.37□□□□□ -1.23
CACNA1C-229ENST00000496818 SHTN1A0MZ66 631 aa7.37□□□□□ -1.23
CACNA1C-229ENST00000496818 ATP5J2-PTCD1G3V325 749 aa7.37□□□□□ -1.23
CACNA1C-229ENST00000496818 CHL1O00533 1208 aa7.37□□□□□ -1.23
CACNA1C-229ENST00000496818 ATG7O95352 703 aa7.37□□□□□ -1.23
CACNA1C-229ENST00000496818 DDX58O95786 925 aaKnown RBP7.37□□□□□ -1.23
CACNA1C-229ENST00000496818 RGS19P49795 217 aa7.37□□□□□ -1.23
CACNA1C-229ENST00000496818 GPSM2P81274 684 aa7.37□□□□□ -1.23
CACNA1C-229ENST00000496818 KRT24Q2M2I5 525 aa7.37□□□□□ -1.23
CACNA1C-229ENST00000496818 MAP7D1Q3KQU3 841 aa7.37□□□□□ -1.23
CACNA1C-229ENST00000496818 CRTC2Q53ET0 693 aaPredicted RBP7.37□□□□□ -1.23
CACNA1C-229ENST00000496818 RNF20Q5VTR2 975 aa7.37□□□□□ -1.23
CACNA1C-229ENST00000496818 TRMT44Q8IYL2 757 aaKnown RBP7.37□□□□□ -1.23
CACNA1C-229ENST00000496818 ZBTB38Q8NAP3 1195 aaPredicted RBP7.37□□□□□ -1.23
CACNA1C-229ENST00000496818 TBC1D16Q8TBP0 767 aa7.37□□□□□ -1.23
CACNA1C-229ENST00000496818 ZNF428Q96B54 188 aa7.37□□□□□ -1.23
CACNA1C-229ENST00000496818 RUNDC1Q96C34 613 aa7.37□□□□□ -1.23
CACNA1C-229ENST00000496818 ISCA1Q9BUE6 129 aa7.37□□□□□ -1.23
CACNA1C-229ENST00000496818 TRAIPQ9BWF2 469 aa7.37□□□□□ -1.23
CACNA1C-229ENST00000496818 CHMP4AQ9BY43 222 aa7.37□□□□□ -1.23
CACNA1C-229ENST00000496818 GGA1Q9UJY5 639 aa7.37□□□□□ -1.23
CACNA1C-229ENST00000496818 ANKRD36CQ5JPF3 1778 aa7.37□□□□□ -1.23
CACNA1C-229ENST00000496818 DDX60Q8IY21 1712 aaKnown RBP7.37□□□□□ -1.23
CACNA1C-229ENST00000496818 PCNTO95613 3336 aa7.36□□□□□ -1.23
CACNA1C-229ENST00000496818 XDHP47989 1333 aa7.36□□□□□ -1.23
CACNA1C-229ENST00000496818 ESPNB1AK53 854 aa7.36□□□□□ -1.23
CACNA1C-229ENST00000496818 RPS8P62241 208 aaKnown RBP7.36□□□□□ -1.23
CACNA1C-229ENST00000496818 FKBP1BP68106 108 aa7.36□□□□□ -1.23
CACNA1C-229ENST00000496818 FOXC1Q12948 553 aa7.36□□□□□ -1.23
CACNA1C-229ENST00000496818 DUSP27Q5VZP5 1158 aa7.36□□□□□ -1.23
CACNA1C-229ENST00000496818 AGBL3Q8NEM8 1001 aa7.36□□□□□ -1.23
CACNA1C-229ENST00000496818 CDCA5Q96FF9 252 aa7.36□□□□□ -1.23
CACNA1C-229ENST00000496818 ZNF594Q96JF6 807 aaPredicted RBP7.36□□□□□ -1.23
CACNA1C-229ENST00000496818 CDC5LQ99459 802 aaKnown RBP7.36□□□□□ -1.23
CACNA1C-229ENST00000496818 PODXL2Q9NZ53 605 aa7.36□□□□□ -1.23
CACNA1C-229ENST00000496818 POLLQ9UGP5 575 aa7.36□□□□□ -1.23
CACNA1C-229ENST00000496818 NOVA2Q9UNW9 492 aaKnown RBP7.36□□□□□ -1.23
CACNA1C-229ENST00000496818 NOD1Q9Y239 953 aa7.36□□□□□ -1.23
CACNA1C-229ENST00000496818 DLG5Q8TDM6 1919 aa7.35□□□□□ -1.23
CACNA1C-229ENST00000496818 MYO3BQ8WXR4 1341 aa7.35□□□□□ -1.23
CACNA1C-229ENST00000496818 PITPNM2Q9BZ72 1349 aa7.35□□□□□ -1.23
CACNA1C-229ENST00000496818 FAM155AB1AL88 458 aaPredicted RBP7.35□□□□□ -1.23
CACNA1C-229ENST00000496818 USP17L15C9J2P7 530 aa7.35□□□□□ -1.23
CACNA1C-229ENST00000496818 USP17L10C9JJH3 530 aa7.35□□□□□ -1.23
CACNA1C-229ENST00000496818 USP17L13C9JLJ4 530 aa7.35□□□□□ -1.23
CACNA1C-229ENST00000496818 USP17L12C9JPN9 530 aa7.35□□□□□ -1.23
CACNA1C-229ENST00000496818 USP17L11C9JVI0 530 aa7.35□□□□□ -1.23
CACNA1C-229ENST00000496818 USP17L21D6R901 530 aa7.35□□□□□ -1.23
CACNA1C-229ENST00000496818 USP17L18D6R9N7 530 aa7.35□□□□□ -1.23
CACNA1C-229ENST00000496818 USP17L22D6RA61 530 aa7.35□□□□□ -1.23
CACNA1C-229ENST00000496818 USP17L17D6RBQ6 530 aa7.35□□□□□ -1.23
CACNA1C-229ENST00000496818 USP17L19D6RCP7 530 aa7.35□□□□□ -1.23
CACNA1C-229ENST00000496818 USP17L20D6RJB6 530 aa7.35□□□□□ -1.23
CACNA1C-229ENST00000496818 PDE8AO60658 829 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms