RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 PLEKHG2Q9H7P9 1386 aa7.32□□□□□ -1.24
SSBP1-213ENST00000496622 EYA2O00167 538 aa7.32□□□□□ -1.24
SSBP1-213ENST00000496622 SGSM2O43147 1006 aa7.32□□□□□ -1.24
SSBP1-213ENST00000496622 TAF5LO75529 589 aa7.32□□□□□ -1.24
SSBP1-213ENST00000496622 CLK2P49760 499 aaKnown RBP7.32□□□□□ -1.24
SSBP1-213ENST00000496622 NMIQ13287 307 aaPredicted RBP7.32□□□□□ -1.24
SSBP1-213ENST00000496622 IFIT5Q13325 482 aaKnown RBP7.32□□□□□ -1.24
SSBP1-213ENST00000496622 SCARF1Q14162 830 aa7.32□□□□□ -1.24
SSBP1-213ENST00000496622 LDHAL6AQ6ZMR3 332 aa7.32□□□□□ -1.24
SSBP1-213ENST00000496622 TCEANC2Q96MN5 208 aa7.32□□□□□ -1.24
SSBP1-213ENST00000496622 CAMTA2O94983 1202 aa7.31□□□□□ -1.24
SSBP1-213ENST00000496622 PCCAP05165 728 aaPredicted RBP7.31□□□□□ -1.24
SSBP1-213ENST00000496622 FKBP4Q02790 459 aaKnown RBP eCLIP7.31□□□□□ -1.24
SSBP1-213ENST00000496622 ADCK5Q3MIX3 580 aa7.31□□□□□ -1.24
SSBP1-213ENST00000496622 CT47A1Q5JQC4 288 aaPredicted RBP7.31□□□□□ -1.24
SSBP1-213ENST00000496622 NBPF5PQ86XG9 351 aaPredicted RBP7.31□□□□□ -1.24
SSBP1-213ENST00000496622 SEPT12Q8IYM1 358 aa7.31□□□□□ -1.24
SSBP1-213ENST00000496622 PRKD2Q9BZL6 878 aa7.31□□□□□ -1.24
SSBP1-213ENST00000496622 A0A0G2JLW4 131 aa7.31□□□□□ -1.24
SSBP1-213ENST00000496622 MTMR2Q13614 643 aa7.31□□□□□ -1.24
SSBP1-213ENST00000496622 PRPF40BQ6NWY9 871 aaKnown RBP7.31□□□□□ -1.24
SSBP1-213ENST00000496622 TTC41PQ6P2S7 1318 aa7.31□□□□□ -1.24
SSBP1-213ENST00000496622 K7ELQ4 463 aaPredicted RBP7.31□□□□□ -1.24
SSBP1-213ENST00000496622 TRIM28Q13263 835 aaKnown RBP7.31□□□□□ -1.24
SSBP1-213ENST00000496622 ZNF34Q8IZ26 560 aa7.31□□□□□ -1.24
SSBP1-213ENST00000496622 PRR7Q8TB68 274 aa7.31□□□□□ -1.24
SSBP1-213ENST00000496622 PIK3R5Q8WYR1 880 aa7.31□□□□□ -1.24
SSBP1-213ENST00000496622 SNX27Q96L92 541 aa7.31□□□□□ -1.24
SSBP1-213ENST00000496622 LSG1Q9H089 658 aaKnown RBP7.31□□□□□ -1.24
SSBP1-213ENST00000496622 CNNM1Q9NRU3 951 aa7.31□□□□□ -1.24
SSBP1-213ENST00000496622 LRRC4BQ9NT99 713 aa7.31□□□□□ -1.24
SSBP1-213ENST00000496622 RAI14Q9P0K7 980 aa7.31□□□□□ -1.24
SSBP1-213ENST00000496622 SPTLC1O15269 473 aa7.3□□□□□ -1.24
SSBP1-213ENST00000496622 CTSWP56202 376 aa7.3□□□□□ -1.24
SSBP1-213ENST00000496622 USPL1Q5W0Q7 1092 aa7.3□□□□□ -1.24
SSBP1-213ENST00000496622 EVI5LQ96CN4 794 aa7.3□□□□□ -1.24
SSBP1-213ENST00000496622 GPATCH3Q96I76 525 aa7.3□□□□□ -1.24
SSBP1-213ENST00000496622 CEP126Q9P2H0 1117 aa7.3□□□□□ -1.24
SSBP1-213ENST00000496622 GRIN3BO60391 1043 aa7.3□□□□□ -1.24
SSBP1-213ENST00000496622 TOMM70O94826 608 aa7.3□□□□□ -1.24
SSBP1-213ENST00000496622 CSF1RP07333 972 aa7.3□□□□□ -1.24
SSBP1-213ENST00000496622 METTL24Q5JXM2 366 aa7.3□□□□□ -1.24
SSBP1-213ENST00000496622 VPS53Q5VIR6 699 aa7.3□□□□□ -1.24
SSBP1-213ENST00000496622 XAGE2Q96GT9 111 aa7.3□□□□□ -1.24
SSBP1-213ENST00000496622 FAM13BQ9NYF5 915 aa7.3□□□□□ -1.24
SSBP1-213ENST00000496622 CCNL1Q9UK58 526 aaPredicted RBP7.3□□□□□ -1.24
SSBP1-213ENST00000496622 IQSEC3Q9UPP2 1182 aaPredicted RBP7.3□□□□□ -1.24
SSBP1-213ENST00000496622 COL15A1P39059 1388 aa7.29□□□□□ -1.24
SSBP1-213ENST00000496622 USP42Q9H9J4 1324 aaKnown RBP7.29□□□□□ -1.24
SSBP1-213ENST00000496622 TRIM37O94972 964 aa7.29□□□□□ -1.24
SSBP1-213ENST00000496622 IL15P40933 162 aaPredicted RBP7.29□□□□□ -1.24
SSBP1-213ENST00000496622 RABEP1Q15276 862 aa7.29□□□□□ -1.24
SSBP1-213ENST00000496622 GORABQ5T7V8 394 aa7.29□□□□□ -1.24
SSBP1-213ENST00000496622 TBC1D9BQ66K14 1250 aa7.29□□□□□ -1.24
SSBP1-213ENST00000496622 LIAT1Q6ZQX7 453 aa7.29□□□□□ -1.24
SSBP1-213ENST00000496622 KIAA1211Q6ZU35 1233 aa7.29□□□□□ -1.24
SSBP1-213ENST00000496622 SNX21Q969T3 373 aa7.29□□□□□ -1.24
SSBP1-213ENST00000496622 CALR3Q96L12 384 aaKnown RBP7.29□□□□□ -1.24
SSBP1-213ENST00000496622 SNX14Q9Y5W7 946 aa7.29□□□□□ -1.24
SSBP1-213ENST00000496622 ITGB4P16144 1822 aa7.29□□□□□ -1.24
SSBP1-213ENST00000496622 UBR2Q8IWV8 1755 aa7.29□□□□□ -1.24
SSBP1-213ENST00000496622 ARFGEF2Q9Y6D5 1785 aa7.29□□□□□ -1.24
SSBP1-213ENST00000496622 AOX1Q06278 1338 aa7.29□□□□□ -1.24
SSBP1-213ENST00000496622 SH3TC1Q8TE82 1336 aa7.29□□□□□ -1.24
SSBP1-213ENST00000496622 ATP5JP18859 108 aa7.29□□□□□ -1.24
SSBP1-213ENST00000496622 SSR1P43307 286 aaKnown RBP7.29□□□□□ -1.24
SSBP1-213ENST00000496622 KCNJ4P48050 445 aa7.29□□□□□ -1.24
SSBP1-213ENST00000496622 GPR162Q16538 588 aa7.29□□□□□ -1.24
SSBP1-213ENST00000496622 ERFEQ4G0M1 354 aa7.29□□□□□ -1.24
SSBP1-213ENST00000496622 RETREG3Q86VR2 466 aa7.29□□□□□ -1.24
SSBP1-213ENST00000496622 CEP83Q9Y592 693 aa7.29□□□□□ -1.24
SSBP1-213ENST00000496622 RAD50Q92878 1312 aa7.28□□□□□ -1.24
SSBP1-213ENST00000496622 ERVV-1B6SEH8 477 aa7.28□□□□□ -1.24
SSBP1-213ENST00000496622 PPFIA3O75145 1194 aa7.28□□□□□ -1.24
SSBP1-213ENST00000496622 IFIT1P09914 478 aaKnown RBP7.28□□□□□ -1.24
SSBP1-213ENST00000496622 HSPA4P34932 840 aa7.28□□□□□ -1.24
SSBP1-213ENST00000496622 MYBPC2Q14324 1141 aa7.28□□□□□ -1.24
SSBP1-213ENST00000496622 ATL2Q8NHH9 583 aa7.28□□□□□ -1.24
SSBP1-213ENST00000496622 TMX3Q96JJ7 454 aa7.28□□□□□ -1.24
SSBP1-213ENST00000496622 UTP14AQ9BVJ6 771 aaKnown RBP7.28□□□□□ -1.24
SSBP1-213ENST00000496622 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.28□□□□□ -1.24
SSBP1-213ENST00000496622 DOT1LQ8TEK3 1739 aa7.28□□□□□ -1.24
SSBP1-213ENST00000496622 ANKRD18BA2A2Z9 1011 aa7.28□□□□□ -1.24
SSBP1-213ENST00000496622 PDE8AO60658 829 aa7.28□□□□□ -1.24
SSBP1-213ENST00000496622 CAPN2P17655 700 aa7.28□□□□□ -1.24
SSBP1-213ENST00000496622 CASTP20810 708 aaKnown RBP7.28□□□□□ -1.24
SSBP1-213ENST00000496622 SSFA2P28290 1259 aa7.28□□□□□ -1.24
SSBP1-213ENST00000496622 ZAP70P43403 619 aa7.28□□□□□ -1.24
SSBP1-213ENST00000496622 FAM196AQ6ZSG2 479 aa7.28□□□□□ -1.24
SSBP1-213ENST00000496622 CAMKK2Q96RR4 588 aa7.28□□□□□ -1.24
SSBP1-213ENST00000496622 GZF1Q9H116 711 aaPredicted RBP7.28□□□□□ -1.24
SSBP1-213ENST00000496622 RBM8AQ9Y5S9 174 aaKnown RBP7.28□□□□□ -1.24
SSBP1-213ENST00000496622 MYH14Q7Z406 1995 aaKnown RBP7.27□□□□□ -1.25
SSBP1-213ENST00000496622 NTSR2O95665 410 aa7.27□□□□□ -1.25
SSBP1-213ENST00000496622 SCP2P22307 547 aa7.27□□□□□ -1.25
SSBP1-213ENST00000496622 PHKA1P46020 1223 aa7.27□□□□□ -1.25
SSBP1-213ENST00000496622 Q3C1V9 767 aa7.27□□□□□ -1.25
SSBP1-213ENST00000496622 PTCRAQ6ISU1 281 aaPredicted RBP7.27□□□□□ -1.25
SSBP1-213ENST00000496622 KRT27Q7Z3Y8 459 aa7.27□□□□□ -1.25
SSBP1-213ENST00000496622 NME8Q8N427 588 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms