RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 FLT1P17948 1338 aa26.03■■□□□ 1.76
C9orf3-222ENST00000496567 FOCADQ5VW36 1801 aa26.03■■□□□ 1.76
C9orf3-222ENST00000496567 CDK5RAP2Q96SN8 1893 aa26.03■■□□□ 1.76
C9orf3-222ENST00000496567 POTEIP0CG38 1075 aa26.03■■□□□ 1.76
C9orf3-222ENST00000496567 POTEJP0CG39 1038 aa26.03■■□□□ 1.76
C9orf3-222ENST00000496567 FAM151AQ8WW52 585 aa26.03■■□□□ 1.76
C9orf3-222ENST00000496567 DCP1AQ9NPI6 582 aaPredicted RBP26.03■■□□□ 1.76
C9orf3-222ENST00000496567 TCP10Q12799 353 aa26.02■■□□□ 1.76
C9orf3-222ENST00000496567 DSCC1Q9BVC3 393 aa26.02■■□□□ 1.76
C9orf3-222ENST00000496567 OSBPL5Q9H0X9 879 aaPredicted RBP26.02■■□□□ 1.76
C9orf3-222ENST00000496567 DEFB129Q9H1M3 183 aa26.02■■□□□ 1.76
C9orf3-222ENST00000496567 MKRN1Q9UHC7 482 aaKnown RBP26.02■■□□□ 1.76
C9orf3-222ENST00000496567 PPP2R3BQ9Y5P8 575 aa26.02■■□□□ 1.76
C9orf3-222ENST00000496567 RASA3Q14644 834 aa26.01■■□□□ 1.75
C9orf3-222ENST00000496567 VPS53Q5VIR6 699 aa26.01■■□□□ 1.75
C9orf3-222ENST00000496567 KRT26Q7Z3Y9 468 aa26.01■■□□□ 1.75
C9orf3-222ENST00000496567 IFNL3Q8IZI9 196 aa26.01■■□□□ 1.75
C9orf3-222ENST00000496567 CNTNAP1P78357 1384 aa26■■□□□ 1.75
C9orf3-222ENST00000496567 KIF3CO14782 793 aa26■■□□□ 1.75
C9orf3-222ENST00000496567 CDC37L1Q7L3B6 337 aa26■■□□□ 1.75
C9orf3-222ENST00000496567 REC8O95072 547 aa25.99■■□□□ 1.75
C9orf3-222ENST00000496567 TDO2P48775 406 aa25.99■■□□□ 1.75
C9orf3-222ENST00000496567 ALX1Q15699 326 aa25.99■■□□□ 1.75
C9orf3-222ENST00000496567 NAPBQ9H115 298 aa25.99■■□□□ 1.75
C9orf3-222ENST00000496567 DHX36Q9H2U1 1008 aaKnown RBP25.99■■□□□ 1.75
C9orf3-222ENST00000496567 ANO2Q9NQ90 1003 aa25.99■■□□□ 1.75
C9orf3-222ENST00000496567 MCM9Q9NXL9 1143 aa25.99■■□□□ 1.75
C9orf3-222ENST00000496567 C8orf34Q49A92 452 aa25.99■■□□□ 1.75
C9orf3-222ENST00000496567 AMOTL1Q8IY63 956 aa25.99■■□□□ 1.75
C9orf3-222ENST00000496567 EPB41L4AQ9HCS5 686 aaPredicted RBP25.99■■□□□ 1.75
C9orf3-222ENST00000496567 SCAF8Q9UPN6 1271 aaKnown RBP25.99■■□□□ 1.75
C9orf3-222ENST00000496567 POLR2AP24928 1970 aaKnown RBP25.98■■□□□ 1.75
C9orf3-222ENST00000496567 COL2A1P02458 1487 aaPredicted RBP25.98■■□□□ 1.75
C9orf3-222ENST00000496567 FOXP2O15409 715 aa25.98■■□□□ 1.75
C9orf3-222ENST00000496567 MAP1SQ66K74 1059 aaPredicted RBP25.98■■□□□ 1.75
C9orf3-222ENST00000496567 CHADLQ6NUI6 762 aa25.98■■□□□ 1.75
C9orf3-222ENST00000496567 ZSCAN29Q8IWY8 852 aaPredicted RBP25.98■■□□□ 1.75
C9orf3-222ENST00000496567 ZFPM1Q8IX07 1006 aa25.98■■□□□ 1.75
C9orf3-222ENST00000496567 TMEM39BQ9GZU3 492 aa25.98■■□□□ 1.75
C9orf3-222ENST00000496567 ARPP21Q9UBL0 812 aaPredicted RBP25.98■■□□□ 1.75
C9orf3-222ENST00000496567 NAV1Q8NEY1 1877 aa25.98■■□□□ 1.75
C9orf3-222ENST00000496567 ZMYM6O95789 1325 aa25.97■■□□□ 1.75
C9orf3-222ENST00000496567 SAP30BPQ9UHR5 308 aaKnown RBP25.97■■□□□ 1.75
C9orf3-222ENST00000496567 ATRNL1Q5VV63 1379 aa25.97■■□□□ 1.75
C9orf3-222ENST00000496567 FGAP02671 866 aa25.96■■□□□ 1.75
C9orf3-222ENST00000496567 POLR3DP05423 398 aaPredicted RBP25.96■■□□□ 1.75
C9orf3-222ENST00000496567 PTH1RQ03431 593 aa25.96■■□□□ 1.75
C9orf3-222ENST00000496567 TTC6Q86TZ1 520 aa25.96■■□□□ 1.75
C9orf3-222ENST00000496567 USP48Q86UV5 1035 aa25.96■■□□□ 1.75
C9orf3-222ENST00000496567 LSG1Q9H089 658 aaKnown RBP25.96■■□□□ 1.75
C9orf3-222ENST00000496567 CTNNA3Q9UI47 895 aa25.96■■□□□ 1.75
C9orf3-222ENST00000496567 PALD1Q9ULE6 856 aa25.96■■□□□ 1.75
C9orf3-222ENST00000496567 MYH1P12882 1939 aa25.96■■□□□ 1.75
C9orf3-222ENST00000496567 USP17L12C9JPN9 530 aa25.95■■□□□ 1.75
C9orf3-222ENST00000496567 ADM5C9JUS6 153 aa25.95■■□□□ 1.75
C9orf3-222ENST00000496567 USP17L21D6R901 530 aa25.95■■□□□ 1.75
C9orf3-222ENST00000496567 HLA-DOAP06340 250 aa25.95■■□□□ 1.75
C9orf3-222ENST00000496567 SBK1Q52WX2 424 aa25.95■■□□□ 1.75
C9orf3-222ENST00000496567 MAP4K1Q92918 833 aa25.95■■□□□ 1.75
C9orf3-222ENST00000496567 CTR9Q6PD62 1173 aa25.95■■□□□ 1.74
C9orf3-222ENST00000496567 GLIS2Q9BZE0 524 aaPredicted RBP25.95■■□□□ 1.74
C9orf3-222ENST00000496567 U3KPZ7 1027 aaPredicted RBP25.95■■□□□ 1.74
C9orf3-222ENST00000496567 BAZ2AQ9UIF9 1905 aaKnown RBP25.94■■□□□ 1.74
C9orf3-222ENST00000496567 DDX60LQ5H9U9 1706 aaKnown RBP25.94■■□□□ 1.74
C9orf3-222ENST00000496567 DDTLA6NHG4 134 aaPredicted RBP25.94■■□□□ 1.74
C9orf3-222ENST00000496567 SH3BP5LQ7L8J4 393 aa25.94■■□□□ 1.74
C9orf3-222ENST00000496567 HOOK2Q96ED9 719 aa25.94■■□□□ 1.74
C9orf3-222ENST00000496567 TEPSINQ96N21 525 aa25.94■■□□□ 1.74
C9orf3-222ENST00000496567 CSRNP1Q96S65 589 aa25.94■■□□□ 1.74
C9orf3-222ENST00000496567 PI4KBQ9UBF8 816 aa25.94■■□□□ 1.74
C9orf3-222ENST00000496567 EPB41L2O43491 1005 aaKnown RBP25.93■■□□□ 1.74
C9orf3-222ENST00000496567 TOMM70O94826 608 aa25.93■■□□□ 1.74
C9orf3-222ENST00000496567 SUPT20HL1Q3ZLR7 823 aa25.93■■□□□ 1.74
C9orf3-222ENST00000496567 C12orf60Q5U649 245 aa25.92■■□□□ 1.74
C9orf3-222ENST00000496567 SMC1BQ8NDV3 1235 aa25.92■■□□□ 1.74
C9orf3-222ENST00000496567 RBM46Q8TBY0 533 aaKnown RBP25.92■■□□□ 1.74
C9orf3-222ENST00000496567 MINDY4BA8MYZ0 360 aa25.91■■□□□ 1.74
C9orf3-222ENST00000496567 IMMTQ16891 758 aaKnown RBP25.9■■□□□ 1.74
C9orf3-222ENST00000496567 NBPF12Q5TAG4 269 aaPredicted RBP25.9■■□□□ 1.74
C9orf3-222ENST00000496567 PRAMEF18Q5VWM3 479 aa25.9■■□□□ 1.74
C9orf3-222ENST00000496567 FOXP4Q8IVH2 680 aaPredicted RBP25.9■■□□□ 1.74
C9orf3-222ENST00000496567 CDCA5Q96FF9 252 aa25.9■■□□□ 1.74
C9orf3-222ENST00000496567 EHD4Q9H223 541 aa25.9■■□□□ 1.74
C9orf3-222ENST00000496567 RBM8AQ9Y5S9 174 aaKnown RBP25.9■■□□□ 1.74
C9orf3-222ENST00000496567 NF2P35240 595 aa25.9■■□□□ 1.74
C9orf3-222ENST00000496567 PLCD1P51178 756 aa25.9■■□□□ 1.74
C9orf3-222ENST00000496567 SLC4A8Q2Y0W8 1093 aa25.9■■□□□ 1.74
C9orf3-222ENST00000496567 TAOK2Q9UL54 1235 aa25.9■■□□□ 1.74
C9orf3-222ENST00000496567 ZNF213O14771 459 aa25.89■■□□□ 1.73
C9orf3-222ENST00000496567 SLC3A2P08195 630 aaKnown RBP25.89■■□□□ 1.73
C9orf3-222ENST00000496567 CYP2D6P10635 497 aa25.89■■□□□ 1.73
C9orf3-222ENST00000496567 PPARAQ07869 468 aa25.89■■□□□ 1.73
C9orf3-222ENST00000496567 CDAN1Q8IWY9 1227 aa25.89■■□□□ 1.73
C9orf3-222ENST00000496567 TRIM34Q9BYJ4 488 aa25.89■■□□□ 1.73
C9orf3-222ENST00000496567 SERPINB13Q9UIV8 391 aa25.89■■□□□ 1.73
C9orf3-222ENST00000496567 CYP2D7A0A087X1C5 515 aa25.88■■□□□ 1.73
C9orf3-222ENST00000496567 DCAF15Q66K64 600 aa25.88■■□□□ 1.73
C9orf3-222ENST00000496567 CRACR2BQ8N4Y2 399 aaPredicted RBP25.88■■□□□ 1.73
C9orf3-222ENST00000496567 HERC5Q9UII4 1024 aaKnown RBP25.88■■□□□ 1.73
C9orf3-222ENST00000496567 ANAPC4Q9UJX5 808 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms