RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, human

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRNKL1-205	ENST00000496549	CUL5	Q93034	780 aa		9.18	□□□□□ -0.94
CRNKL1-205	ENST00000496549	RTN3	O95197	1032 aa	Predicted RBP	9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	ZC3H6	P61129	1189 aa	Known RBP	9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	HLTF	Q14527	1009 aa	Known RBP eCLIP	9.17	□□□□□ -0.94	4e-9	■■■□□ 15
CRNKL1-205	ENST00000496549	AMOT	Q4VCS5	1084 aa		9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	RASIP1	Q5U651	963 aa		9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	RINL	Q6ZS11	566 aa		9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	TEX9	Q8N6V9	391 aa		9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	SELENOO	Q9BVL4	669 aa		9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	CWC25	Q9NXE8	425 aa	Predicted RBP	9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	HPCAL4	Q9UM19	191 aa		9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	SAR1B	Q9Y6B6	198 aa		9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	KRT86	O43790	486 aa		9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	DNAJC8	O75937	253 aa	Predicted RBP	9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	ZFY	P08048	801 aa	Predicted RBP	9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	PDHB	P11177	359 aa		9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	IMPDH2	P12268	514 aa		9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	PRKAR2B	P31323	418 aa		9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	CTCF	P49711	727 aa	Predicted RBP	9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	ADK	P55263	362 aa	Known RBP	9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	HDGFL1	Q5TGJ6	251 aa		9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	CLASRP	Q8N2M8	674 aa	Known RBP	9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	SLC35F6	Q8N357	371 aa		9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	RNF10	Q8N5U6	811 aa	Known RBP	9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	FAM167B	Q9BTA0	163 aa		9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	EPN3	Q9H201	632 aa		9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	IL1RAPL2	Q9NP60	686 aa		9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	DDX20	Q9UHI6	824 aa	Known RBP	9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	IKBKB	O14920	756 aa		9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	PFKFB2	O60825	505 aa		9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	ZFX	P17010	805 aa	Predicted RBP	9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	TRIM29	Q14134	588 aa		9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	RBM26	Q5T8P6	1007 aa	Known RBP	9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	WLS	Q5T9L3	541 aa		9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	EFCAB2	Q5VUJ9	269 aa		9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	YTHDF3	Q7Z739	585 aa	Known RBP	9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	SYCP3	Q8IZU3	236 aa		9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	CCDC155	Q8N6L0	562 aa		9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	TTC14	Q96N46	770 aa		9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	CTAGE1	Q96RT6	745 aa		9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	AATF	Q9NY61	560 aa	Known RBP eCLIP	9.17	□□□□□ -0.94
CRNKL1-205	ENST00000496549	VWA3A	A6NCI4	1184 aa		9.16	□□□□□ -0.94
CRNKL1-205	ENST00000496549	SYK	P43405	635 aa		9.16	□□□□□ -0.94
CRNKL1-205	ENST00000496549	MAP7D1	Q3KQU3	841 aa		9.16	□□□□□ -0.94
CRNKL1-205	ENST00000496549	HSP90AA4P	Q58FG1	418 aa		9.16	□□□□□ -0.94
CRNKL1-205	ENST00000496549	NBPF14	Q5TI25	921 aa		9.16	□□□□□ -0.94
CRNKL1-205	ENST00000496549	KCTD16	Q68DU8	428 aa		9.16	□□□□□ -0.94
CRNKL1-205	ENST00000496549	RAB11FIP4	Q86YS3	637 aa		9.16	□□□□□ -0.94
CRNKL1-205	ENST00000496549	DHX40	Q8IX18	779 aa	Known RBP	9.16	□□□□□ -0.94
CRNKL1-205	ENST00000496549	RASEF	Q8IZ41	740 aa		9.16	□□□□□ -0.94
CRNKL1-205	ENST00000496549	TEKT4	Q8WW24	435 aa		9.16	□□□□□ -0.94
CRNKL1-205	ENST00000496549	IL17RA	Q96F46	866 aa		9.16	□□□□□ -0.94
CRNKL1-205	ENST00000496549	SCOC	Q9UIL1	159 aa		9.16	□□□□□ -0.94
CRNKL1-205	ENST00000496549	USO1	O60763	962 aa	Known RBP	9.16	□□□□□ -0.94
CRNKL1-205	ENST00000496549	CPA1	P15085	419 aa		9.16	□□□□□ -0.94
CRNKL1-205	ENST00000496549	NR1D1	P20393	614 aa		9.16	□□□□□ -0.94
CRNKL1-205	ENST00000496549	NNT	Q13423	1086 aa		9.16	□□□□□ -0.94
CRNKL1-205	ENST00000496549	NUTM2D	Q5VT03	806 aa	Predicted RBP	9.16	□□□□□ -0.94
CRNKL1-205	ENST00000496549	RUFY4	Q6ZNE9	571 aa		9.16	□□□□□ -0.94
CRNKL1-205	ENST00000496549	NLRP14	Q86W24	1093 aa		9.16	□□□□□ -0.94
CRNKL1-205	ENST00000496549	NUTM2A	Q8IVF1	878 aa	Predicted RBP	9.16	□□□□□ -0.94
CRNKL1-205	ENST00000496549	VSTM4	Q8IW00	320 aa		9.16	□□□□□ -0.94
CRNKL1-205	ENST00000496549	MAGEC3	Q8TD91	643 aa		9.16	□□□□□ -0.94
CRNKL1-205	ENST00000496549	ZNF473	Q8WTR7	871 aa	Known RBP	9.16	□□□□□ -0.94
CRNKL1-205	ENST00000496549	PNKP	Q96T60	521 aa		9.16	□□□□□ -0.94
CRNKL1-205	ENST00000496549	NOD2	Q9HC29	1040 aa		9.16	□□□□□ -0.94
CRNKL1-205	ENST00000496549		A0A1B0GVL5	298 aa		9.16	□□□□□ -0.94
CRNKL1-205	ENST00000496549	GLRX3	O76003	335 aa	Known RBP	9.16	□□□□□ -0.94
CRNKL1-205	ENST00000496549	UBTFL1	P0CB47	393 aa	Predicted RBP	9.16	□□□□□ -0.94
CRNKL1-205	ENST00000496549	PSMD7	P51665	324 aa		9.16	□□□□□ -0.94
CRNKL1-205	ENST00000496549	KLHL10	Q6JEL2	608 aa		9.16	□□□□□ -0.94
CRNKL1-205	ENST00000496549	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	9.16	□□□□□ -0.94
CRNKL1-205	ENST00000496549	RIN2	Q8WYP3	895 aa	Predicted RBP	9.16	□□□□□ -0.94
CRNKL1-205	ENST00000496549	ZFAT	Q9P243	1243 aa		9.16	□□□□□ -0.94
CRNKL1-205	ENST00000496549	MAGI2	Q86UL8	1455 aa		9.16	□□□□□ -0.94
CRNKL1-205	ENST00000496549	EIF2AK4	Q9P2K8	1649 aa	Known RBP	9.16	□□□□□ -0.94
CRNKL1-205	ENST00000496549	LRRIQ3	A6PVS8	624 aa	Predicted RBP	9.15	□□□□□ -0.94
CRNKL1-205	ENST00000496549	AMPH	P49418	695 aa		9.15	□□□□□ -0.94
CRNKL1-205	ENST00000496549	AARS	P49588	968 aa	Known RBP eCLIP	9.15	□□□□□ -0.94
CRNKL1-205	ENST00000496549	RAB27A	P51159	221 aa		9.15	□□□□□ -0.94
CRNKL1-205	ENST00000496549	RBM43	Q6ZSC3	357 aa	Known RBP	9.15	□□□□□ -0.94
CRNKL1-205	ENST00000496549	ANKRD23	Q86SG2	305 aa		9.15	□□□□□ -0.94
CRNKL1-205	ENST00000496549	TMTC1	Q8IUR5	882 aa		9.15	□□□□□ -0.94
CRNKL1-205	ENST00000496549	PPFIBP2	Q8ND30	876 aa		9.15	□□□□□ -0.94
CRNKL1-205	ENST00000496549	RASSF8	Q8NHQ8	419 aa		9.15	□□□□□ -0.94
CRNKL1-205	ENST00000496549	CLIC6	Q96NY7	704 aa		9.15	□□□□□ -0.94
CRNKL1-205	ENST00000496549	TRIM7	Q9C029	511 aa		9.15	□□□□□ -0.94
CRNKL1-205	ENST00000496549	OSBPL3	Q9H4L5	887 aa		9.15	□□□□□ -0.94
CRNKL1-205	ENST00000496549	CEP131	Q9UPN4	1083 aa		9.15	□□□□□ -0.94
CRNKL1-205	ENST00000496549	DIAPH2	O60879	1101 aa		9.15	□□□□□ -0.94
CRNKL1-205	ENST00000496549	COQ9	O75208	318 aa		9.15	□□□□□ -0.94
CRNKL1-205	ENST00000496549	ATP5J	P18859	108 aa		9.15	□□□□□ -0.94
CRNKL1-205	ENST00000496549	EPHB4	P54760	987 aa		9.15	□□□□□ -0.94
CRNKL1-205	ENST00000496549	MRPS35	P82673	323 aa	Known RBP	9.15	□□□□□ -0.94
CRNKL1-205	ENST00000496549	SAFB2	Q14151	953 aa	Known RBP eCLIP	9.15	□□□□□ -0.94
CRNKL1-205	ENST00000496549	SPA17	Q15506	151 aa		9.15	□□□□□ -0.94
CRNKL1-205	ENST00000496549	CCDC102B	Q68D86	513 aa		9.15	□□□□□ -0.94
CRNKL1-205	ENST00000496549	TRIM65	Q6PJ69	517 aa		9.15	□□□□□ -0.94
CRNKL1-205	ENST00000496549	TATDN2	Q93075	761 aa		9.15	□□□□□ -0.94
CRNKL1-205	ENST00000496549	TM6SF1	Q9BZW5	370 aa		9.15	□□□□□ -0.94

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