RNA–Protein interactions for RNA: ENST00000496076.1

CLTC-208, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-208ENST00000496076 DUSP23Q9BVJ7 150 aa8.87□□□□□ -0.99
CLTC-208ENST00000496076 MKNK2Q9HBH9 465 aa8.87□□□□□ -0.99
CLTC-208ENST00000496076 PPP2R3AQ06190 1150 aa8.86□□□□□ -0.99
CLTC-208ENST00000496076 ARHGAP27Q6ZUM4 889 aa8.86□□□□□ -0.99
CLTC-208ENST00000496076 FAM168AQ92567 244 aa8.86□□□□□ -0.99
CLTC-208ENST00000496076 CSRNP1Q96S65 589 aa8.86□□□□□ -0.99
CLTC-208ENST00000496076 TMEM39AQ9NV64 488 aa8.86□□□□□ -0.99
CLTC-208ENST00000496076 FARP2O94887 1054 aaPredicted RBP8.85□□□□□ -0.99
CLTC-208ENST00000496076 OXCT1P55809 520 aa8.85□□□□□ -0.99
CLTC-208ENST00000496076 FCGRTP55899 365 aa8.85□□□□□ -0.99
CLTC-208ENST00000496076 PDZD3Q86UT5 571 aa8.85□□□□□ -0.99
CLTC-208ENST00000496076 HRASLS5Q96KN8 279 aa8.85□□□□□ -0.99
CLTC-208ENST00000496076 SSU72Q9NP77 194 aaKnown RBP8.85□□□□□ -0.99
CLTC-208ENST00000496076 PPP4R2Q9NY27 417 aa8.85□□□□□ -0.99
CLTC-208ENST00000496076 GPN3Q9UHW5 284 aaPredicted RBP8.85□□□□□ -0.99
CLTC-208ENST00000496076 PLAGL2Q9UPG8 496 aa8.85□□□□□ -0.99
CLTC-208ENST00000496076 TMEM265A0A087WTH1 108 aa8.84□□□□□ -0.99
CLTC-208ENST00000496076 CEACAM5P06731 702 aa8.84□□□□□ -0.99
CLTC-208ENST00000496076 NEFMP07197 916 aa8.84□□□□□ -0.99
CLTC-208ENST00000496076 LRRN4CLQ8ND94 238 aa8.84□□□□□ -0.99
CLTC-208ENST00000496076 GTF3C3Q9Y5Q9 886 aa8.84□□□□□ -0.99
CLTC-208ENST00000496076 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.83□□□□□ -1
CLTC-208ENST00000496076 TMEM40Q8WWA1 233 aa8.83□□□□□ -1
CLTC-208ENST00000496076 ISL2Q96A47 359 aa8.83□□□□□ -1
CLTC-208ENST00000496076 ZC3H12AQ5D1E8 599 aaKnown RBP8.82□□□□□ -1
CLTC-208ENST00000496076 TOP6BLQ8N6T0 577 aa8.82□□□□□ -1
CLTC-208ENST00000496076 STK35Q8TDR2 534 aa8.82□□□□□ -1
CLTC-208ENST00000496076 DMRTB1Q96MA1 342 aa8.82□□□□□ -1
CLTC-208ENST00000496076 NLRP2Q9NX02 1062 aa8.82□□□□□ -1
CLTC-208ENST00000496076 DBX1A6NMT0 343 aa8.81□□□□□ -1
CLTC-208ENST00000496076 ARNTP27540 789 aa8.81□□□□□ -1
CLTC-208ENST00000496076 ANGEL2Q5VTE6 544 aaKnown RBP8.81□□□□□ -1
CLTC-208ENST00000496076 TXNDC2Q86VQ3 553 aa8.81□□□□□ -1
CLTC-208ENST00000496076 SULF2Q8IWU5 870 aa8.81□□□□□ -1
CLTC-208ENST00000496076 RNF214Q8ND24 703 aa8.81□□□□□ -1
CLTC-208ENST00000496076 XRCC5P13010 732 aaKnown RBP8.8□□□□□ -1
CLTC-208ENST00000496076 ITIH2P19823 946 aa8.8□□□□□ -1
CLTC-208ENST00000496076 MAP1SQ66K74 1059 aaPredicted RBP8.8□□□□□ -1
CLTC-208ENST00000496076 PI16Q6UXB8 463 aa8.8□□□□□ -1
CLTC-208ENST00000496076 ALKBH8Q96BT7 664 aaKnown RBP8.8□□□□□ -1
CLTC-208ENST00000496076 HEXIM2Q96MH2 286 aaKnown RBP8.8□□□□□ -1
CLTC-208ENST00000496076 BCO2Q9BYV7 579 aa8.8□□□□□ -1
CLTC-208ENST00000496076 AKAP2Q9Y2D5 859 aa8.8□□□□□ -1
CLTC-208ENST00000496076 ERVK-24P63145 666 aa8.79□□□□□ -1
CLTC-208ENST00000496076 PKN1Q16512 942 aa8.79□□□□□ -1
CLTC-208ENST00000496076 SLC23A3Q6PIS1 610 aa8.79□□□□□ -1
CLTC-208ENST00000496076 KSR1Q8IVT5 923 aa8.79□□□□□ -1
CLTC-208ENST00000496076 RBCK1Q9BYM8 510 aa8.79□□□□□ -1
CLTC-208ENST00000496076 TNKS2Q9H2K2 1166 aa8.79□□□□□ -1
CLTC-208ENST00000496076 SNX11Q9Y5W9 270 aa8.79□□□□□ -1
CLTC-208ENST00000496076 FAM214BQ7L5A3 538 aa8.78□□□□□ -1
CLTC-208ENST00000496076 GPBAR1Q8TDU6 330 aa8.78□□□□□ -1
CLTC-208ENST00000496076 EMILIN2Q9BXX0 1053 aa8.78□□□□□ -1
CLTC-208ENST00000496076 NME2P22392 152 aa8.77□□□□□ -1.01
CLTC-208ENST00000496076 PRDM7Q9NQW5 492 aa8.77□□□□□ -1.01
CLTC-208ENST00000496076 ZNF252P-AS1Q0IIN9 211 aa8.76□□□□□ -1.01
CLTC-208ENST00000496076 ACSBG1Q96GR2 724 aa8.76□□□□□ -1.01
CLTC-208ENST00000496076 SLC38A3Q99624 504 aa8.76□□□□□ -1.01
CLTC-208ENST00000496076 CBX8Q9HC52 389 aa8.76□□□□□ -1.01
CLTC-208ENST00000496076 GTF2IRD1Q9UHL9 959 aa8.76□□□□□ -1.01
CLTC-208ENST00000496076 PPM1JQ5JR12 505 aa8.75□□□□□ -1.01
CLTC-208ENST00000496076 NXPE4Q6UWF7 544 aa8.75□□□□□ -1.01
CLTC-208ENST00000496076 MPRIPQ6WCQ1 1025 aa8.75□□□□□ -1.01
CLTC-208ENST00000496076 FLAD1Q8NFF5 587 aa8.75□□□□□ -1.01
CLTC-208ENST00000496076 ASB11Q8WXH4 323 aa8.75□□□□□ -1.01
CLTC-208ENST00000496076 CSADQ9Y600 493 aa8.75□□□□□ -1.01
CLTC-208ENST00000496076 FBLN7Q53RD9 439 aa8.74□□□□□ -1.01
CLTC-208ENST00000496076 TMC7Q7Z402 723 aa8.74□□□□□ -1.01
CLTC-208ENST00000496076 PRDM10Q9NQV6 1147 aa8.74□□□□□ -1.01
CLTC-208ENST00000496076 CACNA2D2Q9NY47 1150 aa8.74□□□□□ -1.01
CLTC-208ENST00000496076 LRRC10BA6NIK2 292 aa8.73□□□□□ -1.01
CLTC-208ENST00000496076 IGF2BP3O00425 579 aaKnown RBP eCLIP8.73□□□□□ -1.01
CLTC-208ENST00000496076 ZP2Q05996 745 aa8.73□□□□□ -1.01
CLTC-208ENST00000496076 MESP2Q0VG99 397 aa8.73□□□□□ -1.01
CLTC-208ENST00000496076 IKZF1Q13422 519 aa8.73□□□□□ -1.01
CLTC-208ENST00000496076 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.73□□□□□ -1.01
CLTC-208ENST00000496076 ZSWIM9Q86XI8 627 aa8.73□□□□□ -1.01
CLTC-208ENST00000496076 SPACA3Q8IXA5 215 aa8.73□□□□□ -1.01
CLTC-208ENST00000496076 CCER1Q8TC90 406 aaPredicted RBP8.73□□□□□ -1.01
CLTC-208ENST00000496076 FAM84AQ96KN4 292 aa8.73□□□□□ -1.01
CLTC-208ENST00000496076 LCE4AQ5TA78 99 aa8.72□□□□□ -1.01
CLTC-208ENST00000496076 C12orf40Q86WS4 652 aa8.72□□□□□ -1.01
CLTC-208ENST00000496076 GRIN3AQ8TCU5 1115 aa8.72□□□□□ -1.01
CLTC-208ENST00000496076 NECAB3Q96P71 396 aaPredicted RBP8.72□□□□□ -1.01
CLTC-208ENST00000496076 PICK1Q9NRD5 415 aa8.72□□□□□ -1.01
CLTC-208ENST00000496076 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.72□□□□□ -1.01
CLTC-208ENST00000496076 ZNF503-AS2A6NEH8 195 aa8.71□□□□□ -1.02
CLTC-208ENST00000496076 DCDC2CA8MYV0 355 aa8.71□□□□□ -1.02
CLTC-208ENST00000496076 NTF4P34130 210 aa8.71□□□□□ -1.02
CLTC-208ENST00000496076 KCNMB1Q16558 191 aa8.71□□□□□ -1.02
CLTC-208ENST00000496076 NKPD1Q17RQ9 610 aa8.71□□□□□ -1.02
CLTC-208ENST00000496076 SPOCD1Q6ZMY3 1216 aa8.71□□□□□ -1.02
CLTC-208ENST00000496076 UBE3DQ7Z6J8 389 aa8.71□□□□□ -1.02
CLTC-208ENST00000496076 KRTAP4-9Q9BYQ8 210 aa8.71□□□□□ -1.02
CLTC-208ENST00000496076 FAM53CQ9NYF3 392 aa8.71□□□□□ -1.02
CLTC-208ENST00000496076 BMP6P22004 513 aa8.7□□□□□ -1.02
CLTC-208ENST00000496076 RING1Q06587 406 aa8.7□□□□□ -1.02
CLTC-208ENST00000496076 MLANAQ16655 118 aa8.7□□□□□ -1.02
CLTC-208ENST00000496076 C3orf58Q8NDZ4 430 aa8.7□□□□□ -1.02
CLTC-208ENST00000496076 CTNND2Q9UQB3 1225 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms