RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 ALX1Q15699 326 aa23.28■■□□□ 1.32
ATG3-208ENST00000495756 EAPPQ56P03 285 aaPredicted RBP23.28■■□□□ 1.32
ATG3-208ENST00000495756 ZC3H15Q8WU90 426 aaKnown RBP23.28■■□□□ 1.32
ATG3-208ENST00000495756 MAP4K1Q92918 833 aa23.28■■□□□ 1.32
ATG3-208ENST00000495756 DDRGK1Q96HY6 314 aa23.28■■□□□ 1.32
ATG3-208ENST00000495756 GGA3Q9NZ52 723 aa23.28■■□□□ 1.32
ATG3-208ENST00000495756 NAV1Q8NEY1 1877 aa23.27■■□□□ 1.32
ATG3-208ENST00000495756 ENTPD3O75355 529 aa23.27■■□□□ 1.32
ATG3-208ENST00000495756 PITPNM2Q9BZ72 1349 aa23.27■■□□□ 1.31
ATG3-208ENST00000495756 BAZ2AQ9UIF9 1905 aaKnown RBP23.26■■□□□ 1.31
ATG3-208ENST00000495756 FGAP02671 866 aa23.26■■□□□ 1.31
ATG3-208ENST00000495756 TDO2P48775 406 aa23.26■■□□□ 1.31
ATG3-208ENST00000495756 TCP10Q12799 353 aa23.26■■□□□ 1.31
ATG3-208ENST00000495756 FAM83AQ86UY5 434 aa23.26■■□□□ 1.31
ATG3-208ENST00000495756 APOBEC3FQ8IUX4 373 aaKnown RBP23.26■■□□□ 1.31
ATG3-208ENST00000495756 OSBPL5Q9H0X9 879 aaPredicted RBP23.26■■□□□ 1.31
ATG3-208ENST00000495756 NAPBQ9H115 298 aa23.26■■□□□ 1.31
ATG3-208ENST00000495756 PGAP2Q9UHJ9 254 aa23.26■■□□□ 1.31
ATG3-208ENST00000495756 CNTNAP1P78357 1384 aa23.26■■□□□ 1.31
ATG3-208ENST00000495756 ZMYM6O95789 1325 aa23.26■■□□□ 1.31
ATG3-208ENST00000495756 TNFAIP1Q13829 316 aa23.25■■□□□ 1.31
ATG3-208ENST00000495756 ZFPM1Q8IX07 1006 aa23.25■■□□□ 1.31
ATG3-208ENST00000495756 MCM9Q9NXL9 1143 aa23.25■■□□□ 1.31
ATG3-208ENST00000495756 U3KPZ7 1027 aaPredicted RBP23.25■■□□□ 1.31
ATG3-208ENST00000495756 DDX60LQ5H9U9 1706 aaKnown RBP23.25■■□□□ 1.31
ATG3-208ENST00000495756 EPB41L2O43491 1005 aaKnown RBP23.24■■□□□ 1.31
ATG3-208ENST00000495756 TNNI2P48788 182 aa23.24■■□□□ 1.31
ATG3-208ENST00000495756 FAM151AQ8WW52 585 aa23.24■■□□□ 1.31
ATG3-208ENST00000495756 USP26Q9BXU7 913 aa23.24■■□□□ 1.31
ATG3-208ENST00000495756 SAP30BPQ9UHR5 308 aaKnown RBP23.24■■□□□ 1.31
ATG3-208ENST00000495756 SCAF8Q9UPN6 1271 aaKnown RBP23.24■■□□□ 1.31
ATG3-208ENST00000495756 RBM8AQ9Y5S9 174 aaKnown RBP23.24■■□□□ 1.31
ATG3-208ENST00000495756 MYH1P12882 1939 aa23.24■■□□□ 1.31
ATG3-208ENST00000495756 DCPSQ96C86 337 aaKnown RBP23.24■■□□□ 1.31
ATG3-208ENST00000495756 GPBP1L1Q9HC44 474 aaPredicted RBP23.24■■□□□ 1.31
ATG3-208ENST00000495756 CTNNA3Q9UI47 895 aa23.24■■□□□ 1.31
ATG3-208ENST00000495756 USP17L12C9JPN9 530 aa23.23■■□□□ 1.31
ATG3-208ENST00000495756 USP17L21D6R901 530 aa23.23■■□□□ 1.31
ATG3-208ENST00000495756 POTEIP0CG38 1075 aa23.23■■□□□ 1.31
ATG3-208ENST00000495756 POTEJP0CG39 1038 aa23.23■■□□□ 1.31
ATG3-208ENST00000495756 RASA3Q14644 834 aa23.23■■□□□ 1.31
ATG3-208ENST00000495756 CTR9Q6PD62 1173 aa23.23■■□□□ 1.31
ATG3-208ENST00000495756 DEFB129Q9H1M3 183 aa23.23■■□□□ 1.31
ATG3-208ENST00000495756 ARPP21Q9UBL0 812 aaPredicted RBP23.23■■□□□ 1.31
ATG3-208ENST00000495756 PALD1Q9ULE6 856 aa23.23■■□□□ 1.31
ATG3-208ENST00000495756 POLR2AP24928 1970 aaKnown RBP23.23■■□□□ 1.31
ATG3-208ENST00000495756 COL2A1P02458 1487 aaPredicted RBP23.22■■□□□ 1.31
ATG3-208ENST00000495756 SBK1Q52WX2 424 aa23.22■■□□□ 1.31
ATG3-208ENST00000495756 TMEM39BQ9GZU3 492 aa23.22■■□□□ 1.31
ATG3-208ENST00000495756 CLEC11AQ9Y240 323 aa23.22■■□□□ 1.31
ATG3-208ENST00000495756 ATRNL1Q5VV63 1379 aa23.21■■□□□ 1.31
ATG3-208ENST00000495756 POLR3DP05423 398 aaPredicted RBP23.21■■□□□ 1.31
ATG3-208ENST00000495756 SH3BP5LQ7L8J4 393 aa23.21■■□□□ 1.31
ATG3-208ENST00000495756 AMOTL1Q8IY63 956 aa23.21■■□□□ 1.31
ATG3-208ENST00000495756 DHX36Q9H2U1 1008 aaKnown RBP23.21■■□□□ 1.31
ATG3-208ENST00000495756 CYP2D7A0A087X1C5 515 aa23.2■■□□□ 1.3
ATG3-208ENST00000495756 DDTLA6NHG4 134 aaPredicted RBP23.2■■□□□ 1.3
ATG3-208ENST00000495756 CYP2D6P10635 497 aa23.2■■□□□ 1.3
ATG3-208ENST00000495756 NECTIN1Q15223 517 aa23.2■■□□□ 1.3
ATG3-208ENST00000495756 SLC4A8Q2Y0W8 1093 aa23.2■■□□□ 1.3
ATG3-208ENST00000495756 C12orf60Q5U649 245 aa23.2■■□□□ 1.3
ATG3-208ENST00000495756 LDHDQ86WU2 507 aa23.2■■□□□ 1.3
ATG3-208ENST00000495756 SULF1Q8IWU6 871 aa23.2■■□□□ 1.3
ATG3-208ENST00000495756 ZSCAN29Q8IWY8 852 aaPredicted RBP23.2■■□□□ 1.3
ATG3-208ENST00000495756 MINDY4BA8MYZ0 360 aa23.19■■□□□ 1.3
ATG3-208ENST00000495756 KRT26Q7Z3Y9 468 aa23.19■■□□□ 1.3
ATG3-208ENST00000495756 TTC6Q86TZ1 520 aa23.19■■□□□ 1.3
ATG3-208ENST00000495756 PPP2R3BQ9Y5P8 575 aa23.19■■□□□ 1.3
ATG3-208ENST00000495756 LAMB1P07942 1786 aa23.18■■□□□ 1.3
ATG3-208ENST00000495756 LAMA4Q16363 1823 aa23.18■■□□□ 1.3
ATG3-208ENST00000495756 ZNF213O14771 459 aa23.18■■□□□ 1.3
ATG3-208ENST00000495756 PLCD1P51178 756 aa23.18■■□□□ 1.3
ATG3-208ENST00000495756 EVX2Q03828 476 aa23.18■■□□□ 1.3
ATG3-208ENST00000495756 PPARAQ07869 468 aa23.18■■□□□ 1.3
ATG3-208ENST00000495756 IMMTQ16891 758 aaKnown RBP23.18■■□□□ 1.3
ATG3-208ENST00000495756 TEPSINQ96N21 525 aa23.18■■□□□ 1.3
ATG3-208ENST00000495756 HLA-DOAP06340 250 aa23.17■■□□□ 1.3
ATG3-208ENST00000495756 CYP21A2P08686 494 aa23.17■■□□□ 1.3
ATG3-208ENST00000495756 HSPA4P34932 840 aa23.17■■□□□ 1.3
ATG3-208ENST00000495756 HAND2P61296 217 aa23.17■■□□□ 1.3
ATG3-208ENST00000495756 CREB3L3Q68CJ9 461 aa23.17■■□□□ 1.3
ATG3-208ENST00000495756 CDAN1Q8IWY9 1227 aa23.17■■□□□ 1.3
ATG3-208ENST00000495756 CSRNP1Q96S65 589 aa23.17■■□□□ 1.3
ATG3-208ENST00000495756 UPF2Q9HAU5 1272 aaKnown RBP23.17■■□□□ 1.3
ATG3-208ENST00000495756 PI4KBQ9UBF8 816 aa23.17■■□□□ 1.3
ATG3-208ENST00000495756 ADM5C9JUS6 153 aa23.17■■□□□ 1.3
ATG3-208ENST00000495756 SMIM22K7EJ46 135 aa23.17■■□□□ 1.3
ATG3-208ENST00000495756 SLC27A2O14975 620 aa23.17■■□□□ 1.3
ATG3-208ENST00000495756 CDC37L1Q7L3B6 337 aa23.17■■□□□ 1.3
ATG3-208ENST00000495756 ANAPC4Q9UJX5 808 aa23.17■■□□□ 1.3
ATG3-208ENST00000495756 RNF20Q5VTR2 975 aa23.16■■□□□ 1.3
ATG3-208ENST00000495756 MAP1SQ66K74 1059 aaPredicted RBP23.16■■□□□ 1.3
ATG3-208ENST00000495756 USP48Q86UV5 1035 aa23.16■■□□□ 1.3
ATG3-208ENST00000495756 GLIS2Q9BZE0 524 aaPredicted RBP23.16■■□□□ 1.3
ATG3-208ENST00000495756 NBPF3Q9H094 633 aa23.16■■□□□ 1.3
ATG3-208ENST00000495756 SIPA1L1O43166 1804 aa23.15■■□□□ 1.3
ATG3-208ENST00000495756 KIF3CO14782 793 aa23.15■■□□□ 1.3
ATG3-208ENST00000495756 MCCP23508 829 aa23.15■■□□□ 1.3
ATG3-208ENST00000495756 PRAMEF18Q5VWM3 479 aa23.15■■□□□ 1.3
ATG3-208ENST00000495756 EHD4Q9H223 541 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms