RNA–Protein interactions for RNA: ENST00000495749.1

TM9SF4-207, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 3,023 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-207ENST00000495749 HPS5Q9UPZ3 1129 aa10.54□□□□□ -0.72
TM9SF4-207ENST00000495749 SLIT2O94813 1529 aa10.54□□□□□ -0.72
TM9SF4-207ENST00000495749 A0A1B0GVL5 298 aa10.54□□□□□ -0.72
TM9SF4-207ENST00000495749 CCDC69A6NI79 296 aa10.54□□□□□ -0.72
TM9SF4-207ENST00000495749 DHX40Q8IX18 779 aaKnown RBP10.54□□□□□ -0.72
TM9SF4-207ENST00000495749 AOPEPQ8N6M6 819 aa10.54□□□□□ -0.72
TM9SF4-207ENST00000495749 ZNF396Q96N95 335 aaPredicted RBP10.54□□□□□ -0.72
TM9SF4-207ENST00000495749 NLRP3Q96P20 1036 aa10.54□□□□□ -0.72
TM9SF4-207ENST00000495749 SDF4Q9BRK5 362 aa10.54□□□□□ -0.72
TM9SF4-207ENST00000495749 RTCBQ9Y3I0 505 aaKnown RBP10.54□□□□□ -0.72
TM9SF4-207ENST00000495749 TCRBV5S4A2TA0A5A2 114 aa10.53□□□□□ -0.72
TM9SF4-207ENST00000495749 GSG1L2A8MUP6 293 aa10.53□□□□□ -0.72
TM9SF4-207ENST00000495749 ABCC6O95255 1503 aa10.53□□□□□ -0.72
TM9SF4-207ENST00000495749 RFC4P35249 363 aa10.53□□□□□ -0.72
TM9SF4-207ENST00000495749 METAP2P50579 478 aaKnown RBP eCLIP10.53□□□□□ -0.72
TM9SF4-207ENST00000495749 ENGASEQ8NFI3 743 aa10.53□□□□□ -0.72
TM9SF4-207ENST00000495749 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.53□□□□□ -0.72
TM9SF4-207ENST00000495749 ANO10Q9NW15 660 aa10.53□□□□□ -0.72
TM9SF4-207ENST00000495749 ANKIB1Q9P2G1 1089 aa10.53□□□□□ -0.72
TM9SF4-207ENST00000495749 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.53□□□□□ -0.72
TM9SF4-207ENST00000495749 CLIC4Q9Y696 253 aa10.53□□□□□ -0.72
TM9SF4-207ENST00000495749 V9GYY5 206 aaPredicted RBP10.53□□□□□ -0.72
TM9SF4-207ENST00000495749 SHANK3Q9BYB0 1731 aa10.53□□□□□ -0.72
TM9SF4-207ENST00000495749 LRP6O75581 1613 aa10.53□□□□□ -0.72
TM9SF4-207ENST00000495749 ABCC12Q96J65 1359 aa10.53□□□□□ -0.72
TM9SF4-207ENST00000495749 ARID4AP29374 1257 aaPredicted RBP10.53□□□□□ -0.72
TM9SF4-207ENST00000495749 RPS8P62241 208 aaKnown RBP10.53□□□□□ -0.72
TM9SF4-207ENST00000495749 UBE3CQ15386 1083 aa10.53□□□□□ -0.72
TM9SF4-207ENST00000495749 PTPN14Q15678 1187 aa10.53□□□□□ -0.72
TM9SF4-207ENST00000495749 CEP57L1Q8IYX8 460 aa10.53□□□□□ -0.72
TM9SF4-207ENST00000495749 RANBP6O60518 1105 aaKnown RBP10.52□□□□□ -0.72
TM9SF4-207ENST00000495749 MFSD6Q6ZSS7 791 aa10.52□□□□□ -0.72
TM9SF4-207ENST00000495749 BARGINQ6ZT62 677 aa10.52□□□□□ -0.72
TM9SF4-207ENST00000495749 SLC26A6Q9BXS9 759 aa10.52□□□□□ -0.72
TM9SF4-207ENST00000495749 AATFQ9NY61 560 aaKnown RBP eCLIP10.52□□□□□ -0.72
TM9SF4-207ENST00000495749 PCDHA7Q9UN72 937 aa10.52□□□□□ -0.72
TM9SF4-207ENST00000495749 CARMIL3Q8ND23 1372 aa10.52□□□□□ -0.73
TM9SF4-207ENST00000495749 KIF28PB7ZC32 967 aa10.52□□□□□ -0.73
TM9SF4-207ENST00000495749 PATL2C9JE40 543 aaKnown RBP10.52□□□□□ -0.73
TM9SF4-207ENST00000495749 BIN1O00499 593 aa10.52□□□□□ -0.73
TM9SF4-207ENST00000495749 PRDX5P30044 214 aa10.52□□□□□ -0.73
TM9SF4-207ENST00000495749 RBM6P78332 1123 aaKnown RBP10.52□□□□□ -0.73
TM9SF4-207ENST00000495749 CAVIN4Q5BKX8 364 aa10.52□□□□□ -0.73
TM9SF4-207ENST00000495749 SPECC1Q5M775 1068 aa10.52□□□□□ -0.73
TM9SF4-207ENST00000495749 FAM84BQ96KN1 310 aaPredicted RBP10.52□□□□□ -0.73
TM9SF4-207ENST00000495749 FEZ1Q99689 392 aa10.52□□□□□ -0.73
TM9SF4-207ENST00000495749 GTPBP4Q9BZE4 634 aaKnown RBP10.52□□□□□ -0.73
TM9SF4-207ENST00000495749 ANGEL1Q9UNK9 670 aaKnown RBP10.52□□□□□ -0.73
TM9SF4-207ENST00000495749 KCNJ14Q9UNX9 436 aa10.52□□□□□ -0.73
TM9SF4-207ENST00000495749 TJP1Q07157 1748 aa10.52□□□□□ -0.73
TM9SF4-207ENST00000495749 RFX7Q2KHR2 1363 aa10.52□□□□□ -0.73
TM9SF4-207ENST00000495749 NEMFO60524 1076 aa10.52□□□□□ -0.73
TM9SF4-207ENST00000495749 GUCY1A2P33402 732 aa10.52□□□□□ -0.73
TM9SF4-207ENST00000495749 HOMEZQ8IX15 550 aa10.52□□□□□ -0.73
TM9SF4-207ENST00000495749 ZNF274Q96GC6 653 aaPredicted RBP10.52□□□□□ -0.73
TM9SF4-207ENST00000495749 ALG1Q9BT22 464 aa10.52□□□□□ -0.73
TM9SF4-207ENST00000495749 ZNF215Q9UL58 517 aaPredicted RBP10.52□□□□□ -0.73
TM9SF4-207ENST00000495749 SPATA31A6Q5VVP1 1343 aa10.51□□□□□ -0.73
TM9SF4-207ENST00000495749 ITGB4P16144 1822 aa10.51□□□□□ -0.73
TM9SF4-207ENST00000495749 GOLGA8AA7E2F4 631 aa10.51□□□□□ -0.73
TM9SF4-207ENST00000495749 CCZ1BP86790 482 aa10.51□□□□□ -0.73
TM9SF4-207ENST00000495749 CCZ1P86791 482 aaPredicted RBP10.51□□□□□ -0.73
TM9SF4-207ENST00000495749 NFIXQ14938 502 aa10.51□□□□□ -0.73
TM9SF4-207ENST00000495749 STK38Q15208 465 aa10.51□□□□□ -0.73
TM9SF4-207ENST00000495749 SYCP1Q15431 976 aa10.51□□□□□ -0.73
TM9SF4-207ENST00000495749 MRPS27Q92552 414 aaKnown RBP10.51□□□□□ -0.73
TM9SF4-207ENST00000495749 SLC12A7Q9Y666 1083 aa10.51□□□□□ -0.73
TM9SF4-207ENST00000495749 PLEKHG2Q9H7P9 1386 aa10.51□□□□□ -0.73
TM9SF4-207ENST00000495749 SALL1Q9NSC2 1324 aa10.51□□□□□ -0.73
TM9SF4-207ENST00000495749 ZBTB43O43298 467 aa10.51□□□□□ -0.73
TM9SF4-207ENST00000495749 NMT2O60551 498 aa10.51□□□□□ -0.73
TM9SF4-207ENST00000495749 ZRSR1Q15695 479 aaKnown RBP10.51□□□□□ -0.73
TM9SF4-207ENST00000495749 VPS72Q15906 364 aa10.51□□□□□ -0.73
TM9SF4-207ENST00000495749 APOA5Q6Q788 366 aa10.51□□□□□ -0.73
TM9SF4-207ENST00000495749 AGXT2Q9BYV1 514 aa10.51□□□□□ -0.73
TM9SF4-207ENST00000495749 LRRC4BQ9NT99 713 aa10.51□□□□□ -0.73
TM9SF4-207ENST00000495749 OGFRQ9NZT2 677 aa10.51□□□□□ -0.73
TM9SF4-207ENST00000495749 CGNQ9P2M7 1197 aaKnown RBP10.51□□□□□ -0.73
TM9SF4-207ENST00000495749 TRIM37O94972 964 aa10.5□□□□□ -0.73
TM9SF4-207ENST00000495749 CYP2D6P10635 497 aa10.5□□□□□ -0.73
TM9SF4-207ENST00000495749 NDUFA8P51970 172 aa10.5□□□□□ -0.73
TM9SF4-207ENST00000495749 FAM47AQ5JRC9 791 aa10.5□□□□□ -0.73
TM9SF4-207ENST00000495749 TPTE2Q6XPS3 522 aa10.5□□□□□ -0.73
TM9SF4-207ENST00000495749 NYAP1Q6ZVC0 841 aa10.5□□□□□ -0.73
TM9SF4-207ENST00000495749 SEPT12Q8IYM1 358 aa10.5□□□□□ -0.73
TM9SF4-207ENST00000495749 FMR1NBQ8N0W7 255 aaPredicted RBP10.5□□□□□ -0.73
TM9SF4-207ENST00000495749 AK7Q96M32 723 aa10.5□□□□□ -0.73
TM9SF4-207ENST00000495749 NAT10Q9H0A0 1025 aaKnown RBP10.5□□□□□ -0.73
TM9SF4-207ENST00000495749 UBR2Q8IWV8 1755 aa10.5□□□□□ -0.73
TM9SF4-207ENST00000495749 MYH14Q7Z406 1995 aaKnown RBP10.5□□□□□ -0.73
TM9SF4-207ENST00000495749 LAMB4A4D0S4 1761 aa10.5□□□□□ -0.73
TM9SF4-207ENST00000495749 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.5□□□□□ -0.73
TM9SF4-207ENST00000495749 MAGEB6P1A0A0J9YX57 407 aa10.5□□□□□ -0.73
TM9SF4-207ENST00000495749 DPCR1Q3MIW9 517 aa10.5□□□□□ -0.73
TM9SF4-207ENST00000495749 ATL3Q6DD88 541 aa10.5□□□□□ -0.73
TM9SF4-207ENST00000495749 SYNE3Q6ZMZ3 975 aa10.5□□□□□ -0.73
TM9SF4-207ENST00000495749 CCAR2Q8N163 923 aaKnown RBP10.5□□□□□ -0.73
TM9SF4-207ENST00000495749 USP17L12C9JPN9 530 aa10.5□□□□□ -0.73
TM9SF4-207ENST00000495749 USP17L21D6R901 530 aa10.5□□□□□ -0.73
TM9SF4-207ENST00000495749 SMC2O95347 1197 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms