RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 MBD3O95983 291 aa10.26□□□□□ -0.77
EPHA4-213ENST00000495693 CYP2E1P05181 493 aaPredicted RBP10.26□□□□□ -0.77
EPHA4-213ENST00000495693 CSF1RP07333 972 aa10.26□□□□□ -0.77
EPHA4-213ENST00000495693 CYP19A1P11511 503 aaPredicted RBP10.26□□□□□ -0.77
EPHA4-213ENST00000495693 MCMDC2Q4G0Z9 681 aa10.26□□□□□ -0.77
EPHA4-213ENST00000495693 KBTBD3Q8NAB2 608 aa10.26□□□□□ -0.77
EPHA4-213ENST00000495693 ITPKCQ96DU7 683 aa10.26□□□□□ -0.77
EPHA4-213ENST00000495693 DBNLQ9UJU6 430 aaKnown RBP10.26□□□□□ -0.77
EPHA4-213ENST00000495693 SNX14Q9Y5W7 946 aa10.26□□□□□ -0.77
EPHA4-213ENST00000495693 GOLGA6L3A6NEY3 463 aa10.25□□□□□ -0.77
EPHA4-213ENST00000495693 PDE8AO60658 829 aa10.25□□□□□ -0.77
EPHA4-213ENST00000495693 ZIC2O95409 532 aaPredicted RBP10.25□□□□□ -0.77
EPHA4-213ENST00000495693 NCLP19338 710 aaKnown RBP10.25□□□□□ -0.77
EPHA4-213ENST00000495693 PDCP20941 246 aa10.25□□□□□ -0.77
EPHA4-213ENST00000495693 PIP4K2AP48426 406 aaPredicted RBP10.25□□□□□ -0.77
EPHA4-213ENST00000495693 NMIQ13287 307 aaPredicted RBP10.25□□□□□ -0.77
EPHA4-213ENST00000495693 NECTIN1Q15223 517 aa10.25□□□□□ -0.77
EPHA4-213ENST00000495693 TTF1Q15361 905 aaPredicted RBP10.25□□□□□ -0.77
EPHA4-213ENST00000495693 WASHC4Q2M389 1173 aa10.25□□□□□ -0.77
EPHA4-213ENST00000495693 KLHL40Q2TBA0 621 aa10.25□□□□□ -0.77
EPHA4-213ENST00000495693 GORABQ5T7V8 394 aa10.25□□□□□ -0.77
EPHA4-213ENST00000495693 PPP1R26Q5T8A7 1209 aaPredicted RBP10.25□□□□□ -0.77
EPHA4-213ENST00000495693 SYTL4Q96C24 671 aaPredicted RBP10.25□□□□□ -0.77
EPHA4-213ENST00000495693 PGPEP1Q9NXJ5 209 aa10.25□□□□□ -0.77
EPHA4-213ENST00000495693 PCDHB9Q9Y5E1 797 aa10.25□□□□□ -0.77
EPHA4-213ENST00000495693 SPATA31A6Q5VVP1 1343 aa10.25□□□□□ -0.77
EPHA4-213ENST00000495693 RREB1Q92766 1687 aa10.25□□□□□ -0.77
EPHA4-213ENST00000495693 BAG4O95429 457 aaKnown RBP10.24□□□□□ -0.77
EPHA4-213ENST00000495693 IFIT1P09914 478 aaKnown RBP10.24□□□□□ -0.77
EPHA4-213ENST00000495693 CASTP20810 708 aaKnown RBP10.24□□□□□ -0.77
EPHA4-213ENST00000495693 BLOC1S2Q6QNY1 142 aa10.24□□□□□ -0.77
EPHA4-213ENST00000495693 RUFY3Q7L099 469 aa10.24□□□□□ -0.77
EPHA4-213ENST00000495693 NLRP10Q86W26 655 aa10.24□□□□□ -0.77
EPHA4-213ENST00000495693 SYAP1Q96A49 352 aaPredicted RBP10.24□□□□□ -0.77
EPHA4-213ENST00000495693 ZNF512BQ96KM6 892 aaPredicted RBP10.24□□□□□ -0.77
EPHA4-213ENST00000495693 TTC14Q96N46 770 aa10.24□□□□□ -0.77
EPHA4-213ENST00000495693 NEUROD6Q96NK8 337 aa10.24□□□□□ -0.77
EPHA4-213ENST00000495693 DSCC1Q9BVC3 393 aa10.24□□□□□ -0.77
EPHA4-213ENST00000495693 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.24□□□□□ -0.77
EPHA4-213ENST00000495693 SENP2Q9HC62 589 aa10.24□□□□□ -0.77
EPHA4-213ENST00000495693 PDRG1Q9NUG6 133 aa10.24□□□□□ -0.77
EPHA4-213ENST00000495693 CCDC87Q9NVE4 849 aa10.24□□□□□ -0.77
EPHA4-213ENST00000495693 PAG1Q9NWQ8 432 aa10.24□□□□□ -0.77
EPHA4-213ENST00000495693 CTNNA3Q9UI47 895 aa10.24□□□□□ -0.77
EPHA4-213ENST00000495693 PALD1Q9ULE6 856 aa10.24□□□□□ -0.77
EPHA4-213ENST00000495693 RBM8AQ9Y5S9 174 aaKnown RBP10.24□□□□□ -0.77
EPHA4-213ENST00000495693 RPAP1Q9BWH6 1393 aaPredicted RBP10.24□□□□□ -0.77
EPHA4-213ENST00000495693 A0A1B0GUL7 405 aa10.23□□□□□ -0.77
EPHA4-213ENST00000495693 UQCRFS1P1P0C7P4 283 aa10.23□□□□□ -0.77
EPHA4-213ENST00000495693 SSFA2P28290 1259 aa10.23□□□□□ -0.77
EPHA4-213ENST00000495693 MRE11P49959 708 aa10.23□□□□□ -0.77
EPHA4-213ENST00000495693 CTSWP56202 376 aa10.23□□□□□ -0.77
EPHA4-213ENST00000495693 TTC39AQ5SRH9 613 aa10.23□□□□□ -0.77
EPHA4-213ENST00000495693 USPL1Q5W0Q7 1092 aa10.23□□□□□ -0.77
EPHA4-213ENST00000495693 CREB3L3Q68CJ9 461 aa10.23□□□□□ -0.77
EPHA4-213ENST00000495693 PRPF40BQ6NWY9 871 aaKnown RBP10.23□□□□□ -0.77
EPHA4-213ENST00000495693 CLEC4GQ6UXB4 293 aa10.23□□□□□ -0.77
EPHA4-213ENST00000495693 ATG9AQ7Z3C6 839 aa10.23□□□□□ -0.77
EPHA4-213ENST00000495693 KLHDC4Q8TBB5 520 aa10.23□□□□□ -0.77
EPHA4-213ENST00000495693 JAKMIP1Q96N16 626 aaKnown RBP10.23□□□□□ -0.77
EPHA4-213ENST00000495693 DBNDD2Q9BQY9 259 aa10.23□□□□□ -0.77
EPHA4-213ENST00000495693 ZFAND3Q9H8U3 227 aa10.23□□□□□ -0.77
EPHA4-213ENST00000495693 TRMT112Q9UI30 125 aaKnown RBP10.23□□□□□ -0.77
EPHA4-213ENST00000495693 SMC3Q9UQE7 1217 aa10.23□□□□□ -0.77
EPHA4-213ENST00000495693 CCDC9Q9Y3X0 531 aaKnown RBP10.23□□□□□ -0.77
EPHA4-213ENST00000495693 KIF3AQ9Y496 699 aa10.23□□□□□ -0.77
EPHA4-213ENST00000495693 MROH5Q6ZUA9 1318 aa10.23□□□□□ -0.77
EPHA4-213ENST00000495693 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.22□□□□□ -0.77
EPHA4-213ENST00000495693 ADAMTS2O95450 1211 aa10.22□□□□□ -0.77
EPHA4-213ENST00000495693 BRD1O95696 1058 aa10.22□□□□□ -0.77
EPHA4-213ENST00000495693 ABL2P42684 1182 aa10.22□□□□□ -0.77
EPHA4-213ENST00000495693 VPS72Q15906 364 aa10.22□□□□□ -0.77
EPHA4-213ENST00000495693 ZNF787Q6DD87 383 aa10.22□□□□□ -0.77
EPHA4-213ENST00000495693 TRIM46Q7Z4K8 759 aa10.22□□□□□ -0.77
EPHA4-213ENST00000495693 MEIOBQ8N635 442 aa10.22□□□□□ -0.77
EPHA4-213ENST00000495693 KIFC2Q96AC6 838 aa10.22□□□□□ -0.77
EPHA4-213ENST00000495693 ARXQ96QS3 562 aa10.22□□□□□ -0.77
EPHA4-213ENST00000495693 DNAJC2Q99543 621 aaKnown RBP10.22□□□□□ -0.77
EPHA4-213ENST00000495693 TLR7Q9NYK1 1049 aaKnown RBP10.22□□□□□ -0.77
EPHA4-213ENST00000495693 ZBTB1Q9Y2K1 713 aa10.22□□□□□ -0.77
EPHA4-213ENST00000495693 DDX49Q9Y6V7 483 aaKnown RBP10.22□□□□□ -0.77
EPHA4-213ENST00000495693 MYH3P11055 1940 aa10.22□□□□□ -0.77
EPHA4-213ENST00000495693 RTL9Q8NET4 1388 aa10.22□□□□□ -0.77
EPHA4-213ENST00000495693 LOC102724428A0A0B4J2F2 783 aa10.21□□□□□ -0.77
EPHA4-213ENST00000495693 IRS4O14654 1257 aaPredicted RBP10.21□□□□□ -0.77
EPHA4-213ENST00000495693 SLC27A2O14975 620 aa10.21□□□□□ -0.77
EPHA4-213ENST00000495693 AK2P54819 239 aa10.21□□□□□ -0.77
EPHA4-213ENST00000495693 EIF5P55010 431 aaKnown RBP10.21□□□□□ -0.77
EPHA4-213ENST00000495693 SIK1P57059 783 aa10.21□□□□□ -0.77
EPHA4-213ENST00000495693 METTL24Q5JXM2 366 aa10.21□□□□□ -0.77
EPHA4-213ENST00000495693 LDHAL6AQ6ZMR3 332 aa10.21□□□□□ -0.77
EPHA4-213ENST00000495693 Q6ZVU0 165 aa10.21□□□□□ -0.77
EPHA4-213ENST00000495693 ZNF34Q8IZ26 560 aa10.21□□□□□ -0.77
EPHA4-213ENST00000495693 ANP32BQ92688 251 aaKnown RBP10.21□□□□□ -0.77
EPHA4-213ENST00000495693 UTP14AQ9BVJ6 771 aaKnown RBP10.21□□□□□ -0.77
EPHA4-213ENST00000495693 UPF3BQ9BZI7 483 aaKnown RBP10.21□□□□□ -0.77
EPHA4-213ENST00000495693 GMPR2Q9P2T1 348 aaKnown RBP10.21□□□□□ -0.77
EPHA4-213ENST00000495693 A0A0D9SFI3 127 aa10.2□□□□□ -0.78
EPHA4-213ENST00000495693 RNF113AO15541 343 aaKnown RBP10.2□□□□□ -0.78
EPHA4-213ENST00000495693 LRP5O75197 1615 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms