RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 SIL1Q9H173 461 aa21.85■■□□□ 1.09
TMEM53-209ENST00000495630 HDAC5Q9UQL6 1122 aa21.85■■□□□ 1.09
TMEM53-209ENST00000495630 ZSWIM8A7E2V4 1837 aa21.85■■□□□ 1.09
TMEM53-209ENST00000495630 IL15P40933 162 aaPredicted RBP21.84■■□□□ 1.09
TMEM53-209ENST00000495630 PHKA1P46020 1223 aa21.84■■□□□ 1.09
TMEM53-209ENST00000495630 RGS3P49796 1198 aa21.84■■□□□ 1.09
TMEM53-209ENST00000495630 SLF2Q8IX21 1173 aa21.84■■□□□ 1.09
TMEM53-209ENST00000495630 FAM163AQ96GL9 167 aaPredicted RBP21.84■■□□□ 1.09
TMEM53-209ENST00000495630 RBM27Q9P2N5 1060 aaKnown RBP21.84■■□□□ 1.09
TMEM53-209ENST00000495630 GABRQQ9UN88 632 aa21.84■■□□□ 1.09
TMEM53-209ENST00000495630 NR2E3Q9Y5X4 410 aa21.84■■□□□ 1.09
TMEM53-209ENST00000495630 LRRFIP2Q9Y608 721 aaKnown RBP21.84■■□□□ 1.09
TMEM53-209ENST00000495630 GAKO14976 1311 aa21.83■■□□□ 1.09
TMEM53-209ENST00000495630 ZNF316A6NFI3 1004 aaPredicted RBP21.83■■□□□ 1.09
TMEM53-209ENST00000495630 CTNND1O60716 968 aaKnown RBP21.83■■□□□ 1.09
TMEM53-209ENST00000495630 SGPL1O95470 568 aa21.83■■□□□ 1.09
TMEM53-209ENST00000495630 SLFN5Q08AF3 891 aa21.83■■□□□ 1.09
TMEM53-209ENST00000495630 ZSCAN29Q8IWY8 852 aaPredicted RBP21.83■■□□□ 1.09
TMEM53-209ENST00000495630 U2AF1L4Q8WU68 220 aaKnown RBP21.83■■□□□ 1.09
TMEM53-209ENST00000495630 ATRNL1Q5VV63 1379 aa21.83■■□□□ 1.08
TMEM53-209ENST00000495630 TRIOBPQ9H2D6 2365 aa21.83■■□□□ 1.08
TMEM53-209ENST00000495630 ADCY3O60266 1144 aa21.82■■□□□ 1.08
TMEM53-209ENST00000495630 CCDC102BQ68D86 513 aa21.82■■□□□ 1.08
TMEM53-209ENST00000495630 GADL1Q6ZQY3 521 aa21.82■■□□□ 1.08
TMEM53-209ENST00000495630 SH3BP5LQ7L8J4 393 aa21.82■■□□□ 1.08
TMEM53-209ENST00000495630 PXYLP1Q8TE99 480 aa21.82■■□□□ 1.08
TMEM53-209ENST00000495630 FLT3LGP49771 235 aa21.81■■□□□ 1.08
TMEM53-209ENST00000495630 IRF5Q13568 498 aa21.81■■□□□ 1.08
TMEM53-209ENST00000495630 SPTY2D1Q68D10 685 aaPredicted RBP21.81■■□□□ 1.08
TMEM53-209ENST00000495630 UNC93B1Q9H1C4 597 aa21.81■■□□□ 1.08
TMEM53-209ENST00000495630 DZIP1Q86YF9 867 aaKnown RBP21.8■■□□□ 1.08
TMEM53-209ENST00000495630 PRO3102Q9H379 93 aa21.8■■□□□ 1.08
TMEM53-209ENST00000495630 COPRSQ9NQ92 184 aa21.8■■□□□ 1.08
TMEM53-209ENST00000495630 SMC4Q9NTJ3 1288 aa21.8■■□□□ 1.08
TMEM53-209ENST00000495630 AK9Q5TCS8 1911 aa21.8■■□□□ 1.08
TMEM53-209ENST00000495630 DDTLA6NHG4 134 aaPredicted RBP21.79■■□□□ 1.08
TMEM53-209ENST00000495630 FARP2O94887 1054 aaPredicted RBP21.79■■□□□ 1.08
TMEM53-209ENST00000495630 ABCF2Q9UG63 623 aa21.79■■□□□ 1.08
TMEM53-209ENST00000495630 PDS5AQ29RF7 1337 aaKnown RBP21.79■■□□□ 1.08
TMEM53-209ENST00000495630 TNPO2O14787 897 aaKnown RBP21.78■■□□□ 1.08
TMEM53-209ENST00000495630 ZBTB7BO15156 539 aaPredicted RBP21.78■■□□□ 1.08
TMEM53-209ENST00000495630 TBC1D12O60347 775 aa21.78■■□□□ 1.08
TMEM53-209ENST00000495630 TFRCP02786 760 aaKnown RBP21.78■■□□□ 1.08
TMEM53-209ENST00000495630 ADORA1P30542 326 aa21.78■■□□□ 1.08
TMEM53-209ENST00000495630 TIMM10P62072 90 aa21.78■■□□□ 1.08
TMEM53-209ENST00000495630 SMCR8Q8TEV9 937 aaPredicted RBP21.78■■□□□ 1.08
TMEM53-209ENST00000495630 PA2G4Q9UQ80 394 aaKnown RBP21.78■■□□□ 1.08
TMEM53-209ENST00000495630 NPM3O75607 178 aaKnown RBP21.77■■□□□ 1.08
TMEM53-209ENST00000495630 RASGRF1Q13972 1273 aa21.77■■□□□ 1.08
TMEM53-209ENST00000495630 DDX4Q9NQI0 724 aaKnown RBP21.77■■□□□ 1.08
TMEM53-209ENST00000495630 AGTPBP1Q9UPW5 1226 aa21.77■■□□□ 1.08
TMEM53-209ENST00000495630 GPR75-ASB3A0A0A6YYF3 556 aa21.76■■□□□ 1.07
TMEM53-209ENST00000495630 TRIM75PA6NK02 468 aa21.76■■□□□ 1.07
TMEM53-209ENST00000495630 INHAP05111 366 aa21.76■■□□□ 1.07
TMEM53-209ENST00000495630 ELNP15502 786 aa21.76■■□□□ 1.07
TMEM53-209ENST00000495630 BTDP43251 543 aa21.76■■□□□ 1.07
TMEM53-209ENST00000495630 COA7Q96BR5 231 aa21.76■■□□□ 1.07
TMEM53-209ENST00000495630 API5Q9BZZ5 524 aaKnown RBP21.76■■□□□ 1.07
TMEM53-209ENST00000495630 NOB1Q9ULX3 412 aaKnown RBP21.76■■□□□ 1.07
TMEM53-209ENST00000495630 AKAP2Q9Y2D5 859 aa21.76■■□□□ 1.07
TMEM53-209ENST00000495630 RFX7Q2KHR2 1363 aa21.75■■□□□ 1.07
TMEM53-209ENST00000495630 EVI5O60447 810 aa21.75■■□□□ 1.07
TMEM53-209ENST00000495630 MAP4K4O95819 1239 aaPredicted RBP21.75■■□□□ 1.07
TMEM53-209ENST00000495630 CT47B1P0C2W7 299 aaPredicted RBP21.75■■□□□ 1.07
TMEM53-209ENST00000495630 PICALMQ13492 652 aa21.75■■□□□ 1.07
TMEM53-209ENST00000495630 ERICH6Q7L0X2 663 aa21.75■■□□□ 1.07
TMEM53-209ENST00000495630 DEFB118Q96PH6 123 aa21.75■■□□□ 1.07
TMEM53-209ENST00000495630 PAK6Q9NQU5 681 aaPredicted RBP21.75■■□□□ 1.07
TMEM53-209ENST00000495630 PNMA3Q9UL41 463 aa21.75■■□□□ 1.07
TMEM53-209ENST00000495630 A0A1W2PPC1 479 aa21.74■■□□□ 1.07
TMEM53-209ENST00000495630 SLURP2P0DP57 97 aa21.74■■□□□ 1.07
TMEM53-209ENST00000495630 RHBDL3P58872 404 aa21.74■■□□□ 1.07
TMEM53-209ENST00000495630 MVPQ14764 893 aaKnown RBP21.74■■□□□ 1.07
TMEM53-209ENST00000495630 TRMT2AQ8IZ69 625 aaKnown RBP21.74■■□□□ 1.07
TMEM53-209ENST00000495630 ANKRD13CQ8N6S4 541 aa21.74■■□□□ 1.07
TMEM53-209ENST00000495630 CRISPLD2Q9H0B8 497 aa21.74■■□□□ 1.07
TMEM53-209ENST00000495630 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.74■■□□□ 1.07
TMEM53-209ENST00000495630 MROH7-TTC4A0A0A0MT08 1334 aa21.74■■□□□ 1.07
TMEM53-209ENST00000495630 MYH13Q9UKX3 1938 aa21.73■■□□□ 1.07
TMEM53-209ENST00000495630 A0A1B0GUL7 405 aa21.73■■□□□ 1.07
TMEM53-209ENST00000495630 LDHCP07864 332 aa21.73■■□□□ 1.07
TMEM53-209ENST00000495630 MECOMQ03112 1051 aa21.73■■□□□ 1.07
TMEM53-209ENST00000495630 FAM110CQ1W6H9 321 aa21.73■■□□□ 1.07
TMEM53-209ENST00000495630 PROCA1Q8NCQ7 364 aaPredicted RBP21.73■■□□□ 1.07
TMEM53-209ENST00000495630 CDCA7LQ96GN5 454 aa21.73■■□□□ 1.07
TMEM53-209ENST00000495630 XAGE2Q96GT9 111 aa21.73■■□□□ 1.07
TMEM53-209ENST00000495630 TBC1D2Q9BYX2 928 aa21.73■■□□□ 1.07
TMEM53-209ENST00000495630 OSBPL5Q9H0X9 879 aaPredicted RBP21.73■■□□□ 1.07
TMEM53-209ENST00000495630 RANBP2P49792 3224 aaKnown RBP21.73■■□□□ 1.07
TMEM53-209ENST00000495630 GCLCP48506 637 aaPredicted RBP21.72■■□□□ 1.07
TMEM53-209ENST00000495630 SZT2Q5T011 3432 aa21.72■■□□□ 1.07
TMEM53-209ENST00000495630 GSTO1P78417 241 aa21.71■■□□□ 1.07
TMEM53-209ENST00000495630 TFCP2Q12800 502 aa21.71■■□□□ 1.07
TMEM53-209ENST00000495630 SPP2Q13103 211 aa21.71■■□□□ 1.07
TMEM53-209ENST00000495630 TREML2Q5T2D2 321 aa21.71■■□□□ 1.07
TMEM53-209ENST00000495630 PABPC4Q13310 644 aaKnown RBP eCLIP21.7■■□□□ 1.06
TMEM53-209ENST00000495630 CCDC84Q86UT8 332 aaPredicted RBP21.7■■□□□ 1.06
TMEM53-209ENST00000495630 ZNF280CQ8ND82 737 aa21.7■■□□□ 1.06
TMEM53-209ENST00000495630 ZNF384Q8TF68 577 aa21.7■■□□□ 1.06
TMEM53-209ENST00000495630 MEIS3Q99687 375 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms