RNA–Protein interactions for RNA: ENST00000495553.1

ACTN4-207, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-207ENST00000495553 DOCK2Q92608 1830 aa11.34□□□□□ -0.59
ACTN4-207ENST00000495553 RPAP1Q9BWH6 1393 aaPredicted RBP11.33□□□□□ -0.6
ACTN4-207ENST00000495553 GPAA1O43292 621 aa11.33□□□□□ -0.6
ACTN4-207ENST00000495553 MBD4O95243 580 aa11.33□□□□□ -0.6
ACTN4-207ENST00000495553 RNF20Q5VTR2 975 aa11.33□□□□□ -0.6
ACTN4-207ENST00000495553 PAXIP1Q6ZW49 1069 aaPredicted RBP11.33□□□□□ -0.6
ACTN4-207ENST00000495553 FAM83AQ86UY5 434 aa11.33□□□□□ -0.6
ACTN4-207ENST00000495553 MIGA1Q8NAN2 632 aa11.33□□□□□ -0.6
ACTN4-207ENST00000495553 ZNF384Q8TF68 577 aa11.33□□□□□ -0.6
ACTN4-207ENST00000495553 OSBP2Q969R2 916 aa11.33□□□□□ -0.6
ACTN4-207ENST00000495553 TMEM39BQ9GZU3 492 aa11.33□□□□□ -0.6
ACTN4-207ENST00000495553 PPP1R12BO60237 982 aaPredicted RBP11.32□□□□□ -0.6
ACTN4-207ENST00000495553 USP5P45974 858 aa11.32□□□□□ -0.6
ACTN4-207ENST00000495553 HUNKP57058 714 aa11.32□□□□□ -0.6
ACTN4-207ENST00000495553 FKBP1BP68106 108 aa11.32□□□□□ -0.6
ACTN4-207ENST00000495553 TCP10Q12799 353 aa11.32□□□□□ -0.6
ACTN4-207ENST00000495553 ARMC9Q7Z3E5 817 aa11.32□□□□□ -0.6
ACTN4-207ENST00000495553 TEX11Q8IYF3 940 aa11.32□□□□□ -0.6
ACTN4-207ENST00000495553 DSCC1Q9BVC3 393 aa11.32□□□□□ -0.6
ACTN4-207ENST00000495553 PUS7LQ9H0K6 701 aaKnown RBP11.32□□□□□ -0.6
ACTN4-207ENST00000495553 AATFQ9NY61 560 aaKnown RBP eCLIP11.32□□□□□ -0.6
ACTN4-207ENST00000495553 TLL2Q9Y6L7 1015 aa11.32□□□□□ -0.6
ACTN4-207ENST00000495553 SLC4A4Q9Y6R1 1079 aa11.32□□□□□ -0.6
ACTN4-207ENST00000495553 U3KPZ7 1027 aaPredicted RBP11.32□□□□□ -0.6
ACTN4-207ENST00000495553 ZNF646O15015 1829 aaPredicted RBP11.31□□□□□ -0.6
ACTN4-207ENST00000495553 M0R2C6 588 aa11.31□□□□□ -0.6
ACTN4-207ENST00000495553 ZKSCAN1P17029 563 aaPredicted RBP11.31□□□□□ -0.6
ACTN4-207ENST00000495553 PPP4CP60510 307 aa11.31□□□□□ -0.6
ACTN4-207ENST00000495553 NFIAQ12857 509 aa11.31□□□□□ -0.6
ACTN4-207ENST00000495553 PICALMQ13492 652 aa11.31□□□□□ -0.6
ACTN4-207ENST00000495553 PRKG1Q13976 671 aa11.31□□□□□ -0.6
ACTN4-207ENST00000495553 DEFB115Q30KQ5 88 aa11.31□□□□□ -0.6
ACTN4-207ENST00000495553 NBPF12Q5TAG4 269 aaPredicted RBP11.31□□□□□ -0.6
ACTN4-207ENST00000495553 GIMAP6Q6P9H5 292 aa11.31□□□□□ -0.6
ACTN4-207ENST00000495553 SAPCD2Q86UD0 394 aa11.31□□□□□ -0.6
ACTN4-207ENST00000495553 ZSCAN29Q8IWY8 852 aaPredicted RBP11.31□□□□□ -0.6
ACTN4-207ENST00000495553 FAM151AQ8WW52 585 aa11.31□□□□□ -0.6
ACTN4-207ENST00000495553 HOOK2Q96ED9 719 aa11.31□□□□□ -0.6
ACTN4-207ENST00000495553 STRBPQ96SI9 672 aaKnown RBP11.31□□□□□ -0.6
ACTN4-207ENST00000495553 ARMT1Q9H993 441 aa11.31□□□□□ -0.6
ACTN4-207ENST00000495553 MKRN1Q9UHC7 482 aaKnown RBP11.31□□□□□ -0.6
ACTN4-207ENST00000495553 RASSF10A6NK89 507 aa11.3□□□□□ -0.6
ACTN4-207ENST00000495553 PATL2C9JE40 543 aaKnown RBP11.3□□□□□ -0.6
ACTN4-207ENST00000495553 ENTPD3O75355 529 aa11.3□□□□□ -0.6
ACTN4-207ENST00000495553 WDHD1O75717 1129 aaPredicted RBP11.3□□□□□ -0.6
ACTN4-207ENST00000495553 HSPD1P10809 573 aaKnown RBP11.3□□□□□ -0.6
ACTN4-207ENST00000495553 TDO2P48775 406 aa11.3□□□□□ -0.6
ACTN4-207ENST00000495553 RHBDL3P58872 404 aa11.3□□□□□ -0.6
ACTN4-207ENST00000495553 GRM1Q13255 1194 aa11.3□□□□□ -0.6
ACTN4-207ENST00000495553 ADGRA1Q86SQ6 560 aa11.3□□□□□ -0.6
ACTN4-207ENST00000495553 SH3RF3Q8TEJ3 882 aaPredicted RBP11.3□□□□□ -0.6
ACTN4-207ENST00000495553 SEC62Q99442 399 aaKnown RBP11.3□□□□□ -0.6
ACTN4-207ENST00000495553 IDI2Q9BXS1 227 aa11.3□□□□□ -0.6
ACTN4-207ENST00000495553 NAPBQ9H115 298 aa11.3□□□□□ -0.6
ACTN4-207ENST00000495553 ATP8A2Q9NTI2 1148 aa11.3□□□□□ -0.6
ACTN4-207ENST00000495553 FAM198AQ9UFP1 575 aa11.3□□□□□ -0.6
ACTN4-207ENST00000495553 CNTNAP1P78357 1384 aa11.29□□□□□ -0.6
ACTN4-207ENST00000495553 MYH2Q9UKX2 1941 aa11.29□□□□□ -0.6
ACTN4-207ENST00000495553 UBE2Q2LH0YL09 131 aa11.29□□□□□ -0.6
ACTN4-207ENST00000495553 SLC3A2P08195 630 aaKnown RBP11.29□□□□□ -0.6
ACTN4-207ENST00000495553 ECE1P42892 770 aa11.29□□□□□ -0.6
ACTN4-207ENST00000495553 IREB2P48200 963 aaKnown RBP11.29□□□□□ -0.6
ACTN4-207ENST00000495553 IMMTQ16891 758 aaKnown RBP11.29□□□□□ -0.6
ACTN4-207ENST00000495553 CCDC129Q6ZRS4 1044 aa11.29□□□□□ -0.6
ACTN4-207ENST00000495553 MOB2Q70IA6 237 aa11.29□□□□□ -0.6
ACTN4-207ENST00000495553 ZNF589Q86UQ0 364 aaPredicted RBP11.29□□□□□ -0.6
ACTN4-207ENST00000495553 LCORLQ8N3X6 602 aa11.29□□□□□ -0.6
ACTN4-207ENST00000495553 MAP4K1Q92918 833 aa11.29□□□□□ -0.6
ACTN4-207ENST00000495553 KLRG1Q96E93 195 aa11.29□□□□□ -0.6
ACTN4-207ENST00000495553 HHIPL1Q96JK4 782 aa11.29□□□□□ -0.6
ACTN4-207ENST00000495553 TEPSINQ96N21 525 aa11.29□□□□□ -0.6
ACTN4-207ENST00000495553 C22orf23Q9BZE7 217 aa11.29□□□□□ -0.6
ACTN4-207ENST00000495553 ANGEL1Q9UNK9 670 aaKnown RBP11.29□□□□□ -0.6
ACTN4-207ENST00000495553 MYO5AQ9Y4I1 1855 aaKnown RBP11.29□□□□□ -0.6
ACTN4-207ENST00000495553 ZNF213O14771 459 aa11.28□□□□□ -0.6
ACTN4-207ENST00000495553 NPM3O75607 178 aaKnown RBP11.28□□□□□ -0.6
ACTN4-207ENST00000495553 ZNF157P51786 506 aaPredicted RBP11.28□□□□□ -0.6
ACTN4-207ENST00000495553 DYNLL1P63167 89 aaKnown RBP11.28□□□□□ -0.6
ACTN4-207ENST00000495553 KRT32Q14532 448 aa11.28□□□□□ -0.6
ACTN4-207ENST00000495553 ALX1Q15699 326 aa11.28□□□□□ -0.6
ACTN4-207ENST00000495553 SLFNL1Q499Z3 407 aa11.28□□□□□ -0.6
ACTN4-207ENST00000495553 DCAF15Q66K64 600 aa11.28□□□□□ -0.6
ACTN4-207ENST00000495553 RGMBQ6NW40 437 aa11.28□□□□□ -0.6
ACTN4-207ENST00000495553 CDAN1Q8IWY9 1227 aa11.28□□□□□ -0.6
ACTN4-207ENST00000495553 ZFPM1Q8IX07 1006 aa11.28□□□□□ -0.6
ACTN4-207ENST00000495553 DNAJC5GQ8N7S2 189 aa11.28□□□□□ -0.6
ACTN4-207ENST00000495553 TGFBRAP1Q8WUH2 860 aa11.28□□□□□ -0.6
ACTN4-207ENST00000495553 CSRNP1Q96S65 589 aa11.28□□□□□ -0.6
ACTN4-207ENST00000495553 RIOK1Q9BRS2 568 aaKnown RBP11.28□□□□□ -0.6
ACTN4-207ENST00000495553 USP26Q9BXU7 913 aa11.28□□□□□ -0.6
ACTN4-207ENST00000495553 LSG1Q9H089 658 aaKnown RBP11.28□□□□□ -0.6
ACTN4-207ENST00000495553 DDX4Q9NQI0 724 aaKnown RBP11.28□□□□□ -0.6
ACTN4-207ENST00000495553 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.28□□□□□ -0.6
ACTN4-207ENST00000495553 ARPP21Q9UBL0 812 aaPredicted RBP11.28□□□□□ -0.6
ACTN4-207ENST00000495553 RBM8AQ9Y5S9 174 aaKnown RBP11.28□□□□□ -0.6
ACTN4-207ENST00000495553 ZMYM6O95789 1325 aa11.28□□□□□ -0.6
ACTN4-207ENST00000495553 CHGBP05060 677 aa11.27□□□□□ -0.61
ACTN4-207ENST00000495553 VEGFBP49765 207 aa11.27□□□□□ -0.61
ACTN4-207ENST00000495553 CYP4F22Q6NT55 531 aa11.27□□□□□ -0.61
ACTN4-207ENST00000495553 MIGA2Q7L4E1 593 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms