RNA–Protein interactions for RNA: ENST00000495465.6

RAPGEF3-214, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-214ENST00000495465 OTOP1Q7RTM1 612 aa18■□□□□ 0.47
RAPGEF3-214ENST00000495465 NSUN4Q96CB9 384 aaKnown RBP18■□□□□ 0.47
RAPGEF3-214ENST00000495465 ERO1AQ96HE7 468 aa18■□□□□ 0.47
RAPGEF3-214ENST00000495465 DDX4Q9NQI0 724 aaKnown RBP18■□□□□ 0.47
RAPGEF3-214ENST00000495465 LRP2BPQ9P2M1 347 aa18■□□□□ 0.47
RAPGEF3-214ENST00000495465 CENPFP49454 3210 aa18■□□□□ 0.47
RAPGEF3-214ENST00000495465 GPR75-ASB3A0A0A6YYF3 556 aa17.99■□□□□ 0.47
RAPGEF3-214ENST00000495465 BTBD19C9JJ37 291 aa17.99■□□□□ 0.47
RAPGEF3-214ENST00000495465 LDHCP07864 332 aa17.99■□□□□ 0.47
RAPGEF3-214ENST00000495465 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.99■□□□□ 0.47
RAPGEF3-214ENST00000495465 NOP58Q9Y2X3 529 aaKnown RBP17.99■□□□□ 0.47
RAPGEF3-214ENST00000495465 DDTLA6NHG4 134 aaPredicted RBP17.98■□□□□ 0.47
RAPGEF3-214ENST00000495465 SLURP2P0DP57 97 aa17.98■□□□□ 0.47
RAPGEF3-214ENST00000495465 RHBDL3P58872 404 aa17.98■□□□□ 0.47
RAPGEF3-214ENST00000495465 CEP85Q6P2H3 762 aa17.98■□□□□ 0.47
RAPGEF3-214ENST00000495465 CCDC8Q9H0W5 538 aaPredicted RBP17.98■□□□□ 0.47
RAPGEF3-214ENST00000495465 EFCC1Q9HA90 598 aa17.98■□□□□ 0.47
RAPGEF3-214ENST00000495465 PHF20L1A8MW92 1017 aa17.97■□□□□ 0.47
RAPGEF3-214ENST00000495465 MYH2Q9UKX2 1941 aa17.96■□□□□ 0.47
RAPGEF3-214ENST00000495465 RFX7Q2KHR2 1363 aa17.96■□□□□ 0.47
RAPGEF3-214ENST00000495465 MS4A1P11836 297 aa17.96■□□□□ 0.47
RAPGEF3-214ENST00000495465 CAP1Q01518 475 aa17.96■□□□□ 0.47
RAPGEF3-214ENST00000495465 NOL9Q5SY16 702 aaKnown RBP17.96■□□□□ 0.47
RAPGEF3-214ENST00000495465 TLR7Q9NYK1 1049 aaKnown RBP17.96■□□□□ 0.47
RAPGEF3-214ENST00000495465 DBNLQ9UJU6 430 aaKnown RBP17.96■□□□□ 0.47
RAPGEF3-214ENST00000495465 AK9Q5TCS8 1911 aa17.96■□□□□ 0.47
RAPGEF3-214ENST00000495465 ATRNL1Q5VV63 1379 aa17.95■□□□□ 0.46
RAPGEF3-214ENST00000495465 CYP2E1P05181 493 aaPredicted RBP17.95■□□□□ 0.46
RAPGEF3-214ENST00000495465 NAA16Q6N069 864 aaPredicted RBP17.95■□□□□ 0.46
RAPGEF3-214ENST00000495465 EAF2Q96CJ1 260 aaPredicted RBP17.95■□□□□ 0.46
RAPGEF3-214ENST00000495465 NOL10Q9BSC4 688 aaKnown RBP17.95■□□□□ 0.46
RAPGEF3-214ENST00000495465 PICK1Q9NRD5 415 aa17.95■□□□□ 0.46
RAPGEF3-214ENST00000495465 KCNH4Q9UQ05 1017 aa17.95■□□□□ 0.46
RAPGEF3-214ENST00000495465 EXOC6BQ9Y2D4 811 aa17.95■□□□□ 0.46
RAPGEF3-214ENST00000495465 PTPN22Q9Y2R2 807 aa17.95■□□□□ 0.46
RAPGEF3-214ENST00000495465 ZHX2Q9Y6X8 837 aa17.95■□□□□ 0.46
RAPGEF3-214ENST00000495465 TLR2O60603 784 aa17.94■□□□□ 0.46
RAPGEF3-214ENST00000495465 ZAP70P43403 619 aa17.94■□□□□ 0.46
RAPGEF3-214ENST00000495465 MAP3K10Q02779 954 aa17.94■□□□□ 0.46
RAPGEF3-214ENST00000495465 TEX11Q8IYF3 940 aa17.94■□□□□ 0.46
RAPGEF3-214ENST00000495465 SCYL3Q8IZE3 742 aa17.94■□□□□ 0.46
RAPGEF3-214ENST00000495465 SH3RF3Q8TEJ3 882 aaPredicted RBP17.94■□□□□ 0.46
RAPGEF3-214ENST00000495465 ZCCHC17Q9NP64 241 aaKnown RBP17.94■□□□□ 0.46
RAPGEF3-214ENST00000495465 FAM196BA6NMK8 535 aa17.93■□□□□ 0.46
RAPGEF3-214ENST00000495465 PDHXO00330 501 aa17.93■□□□□ 0.46
RAPGEF3-214ENST00000495465 MAP4K4O95819 1239 aaPredicted RBP17.93■□□□□ 0.46
RAPGEF3-214ENST00000495465 ARHGEF6Q15052 776 aa17.93■□□□□ 0.46
RAPGEF3-214ENST00000495465 ANKRD23Q86SG2 305 aa17.93■□□□□ 0.46
RAPGEF3-214ENST00000495465 ZNF512BQ96KM6 892 aaPredicted RBP17.93■□□□□ 0.46
RAPGEF3-214ENST00000495465 AATFQ9NY61 560 aaKnown RBP eCLIP17.93■□□□□ 0.46
RAPGEF3-214ENST00000495465 COG6Q9Y2V7 657 aa17.93■□□□□ 0.46
RAPGEF3-214ENST00000495465 LAMB1P07942 1786 aa17.92■□□□□ 0.46
RAPGEF3-214ENST00000495465 CXCL11O14625 94 aa17.92■□□□□ 0.46
RAPGEF3-214ENST00000495465 CTNND1O60716 968 aaKnown RBP17.92■□□□□ 0.46
RAPGEF3-214ENST00000495465 NPM3O75607 178 aaKnown RBP17.92■□□□□ 0.46
RAPGEF3-214ENST00000495465 ECM2O94769 699 aaPredicted RBP17.92■□□□□ 0.46
RAPGEF3-214ENST00000495465 PTPRAP18433 802 aa17.92■□□□□ 0.46
RAPGEF3-214ENST00000495465 MOGSQ13724 837 aa17.92■□□□□ 0.46
RAPGEF3-214ENST00000495465 OSBPL5Q9H0X9 879 aaPredicted RBP17.92■□□□□ 0.46
RAPGEF3-214ENST00000495465 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.92■□□□□ 0.46
RAPGEF3-214ENST00000495465 PIH1D3Q9NQM4 214 aaKnown RBP17.92■□□□□ 0.46
RAPGEF3-214ENST00000495465 RCAN3Q9UKA8 241 aa17.92■□□□□ 0.46
RAPGEF3-214ENST00000495465 BAG3O95817 575 aa17.91■□□□□ 0.46
RAPGEF3-214ENST00000495465 KIF22Q14807 665 aa17.91■□□□□ 0.46
RAPGEF3-214ENST00000495465 AACSQ86V21 672 aa17.91■□□□□ 0.46
RAPGEF3-214ENST00000495465 ERC1Q8IUD2 1116 aa17.91■□□□□ 0.46
RAPGEF3-214ENST00000495465 ARHGAP39Q9C0H5 1083 aa17.91■□□□□ 0.46
RAPGEF3-214ENST00000495465 BCL11AQ9H165 835 aa17.91■□□□□ 0.46
RAPGEF3-214ENST00000495465 IL1RAPL2Q9NP60 686 aa17.91■□□□□ 0.46
RAPGEF3-214ENST00000495465 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.91■□□□□ 0.46
RAPGEF3-214ENST00000495465 CPA4Q9UI42 421 aa17.91■□□□□ 0.46
RAPGEF3-214ENST00000495465 APBB1O00213 710 aa17.9■□□□□ 0.46
RAPGEF3-214ENST00000495465 TBC1D12O60347 775 aa17.9■□□□□ 0.46
RAPGEF3-214ENST00000495465 GPAT2Q6NUI2 795 aa17.9■□□□□ 0.46
RAPGEF3-214ENST00000495465 C17orf99Q6UX52 265 aa17.9■□□□□ 0.46
RAPGEF3-214ENST00000495465 ADGRA1Q86SQ6 560 aa17.9■□□□□ 0.46
RAPGEF3-214ENST00000495465 CCDC84Q86UT8 332 aaPredicted RBP17.9■□□□□ 0.46
RAPGEF3-214ENST00000495465 DDX19BQ9UMR2 479 aa17.9■□□□□ 0.46
RAPGEF3-214ENST00000495465 AFG3L2Q9Y4W6 797 aa17.9■□□□□ 0.46
RAPGEF3-214ENST00000495465 NDUFB9Q9Y6M9 179 aa17.9■□□□□ 0.46
RAPGEF3-214ENST00000495465 TRIM75PA6NK02 468 aa17.89■□□□□ 0.45
RAPGEF3-214ENST00000495465 IDH1O75874 414 aaKnown RBP17.89■□□□□ 0.45
RAPGEF3-214ENST00000495465 PLCG2P16885 1265 aa17.89■□□□□ 0.45
RAPGEF3-214ENST00000495465 PPP4CP60510 307 aa17.89■□□□□ 0.45
RAPGEF3-214ENST00000495465 LACTBP83111 547 aaPredicted RBP17.89■□□□□ 0.45
RAPGEF3-214ENST00000495465 HSP90AB4PQ58FF6 505 aa17.89■□□□□ 0.45
RAPGEF3-214ENST00000495465 GADL1Q6ZQY3 521 aa17.89■□□□□ 0.45
RAPGEF3-214ENST00000495465 TGFBRAP1Q8WUH2 860 aa17.89■□□□□ 0.45
RAPGEF3-214ENST00000495465 ZBTB40Q9NUA8 1239 aa17.89■□□□□ 0.45
RAPGEF3-214ENST00000495465 MKI67P46013 3256 aaKnown RBP17.89■□□□□ 0.45
RAPGEF3-214ENST00000495465 A0A0G2JLL6 359 aaPredicted RBP17.88■□□□□ 0.45
RAPGEF3-214ENST00000495465 CYP2C8P10632 490 aa17.88■□□□□ 0.45
RAPGEF3-214ENST00000495465 CYP7A1P22680 504 aa17.88■□□□□ 0.45
RAPGEF3-214ENST00000495465 FASTKD5Q7L8L6 764 aaKnown RBP17.88■□□□□ 0.45
RAPGEF3-214ENST00000495465 PRRT2Q7Z6L0 340 aaPredicted RBP17.88■□□□□ 0.45
RAPGEF3-214ENST00000495465 MAPKAPK5Q8IW41 473 aa17.88■□□□□ 0.45
RAPGEF3-214ENST00000495465 SIRT2Q8IXJ6 389 aa17.88■□□□□ 0.45
RAPGEF3-214ENST00000495465 RPAP2Q8IXW5 612 aaPredicted RBP17.88■□□□□ 0.45
RAPGEF3-214ENST00000495465 RHPN1Q8TCX5 695 aa17.88■□□□□ 0.45
RAPGEF3-214ENST00000495465 PTCH2Q9Y6C5 1203 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms