RNA–Protein interactions for RNA: ENST00000495426.1

BBS9-213, Transcript of Bardet-Biedl syndrome 9, human

TSL 3

Gene BBS9, Length 481 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS9-213	ENST00000495426	PRDM9	Q9NQV7	894 aa		9.31	□□□□□ -0.92
BBS9-213	ENST00000495426	MED23	Q9ULK4	1368 aa		9.31	□□□□□ -0.92
BBS9-213	ENST00000495426	ARAP2	Q8WZ64	1704 aa		9.31	□□□□□ -0.92
BBS9-213	ENST00000495426	COL1A1	P02452	1464 aa	Predicted RBP	9.3	□□□□□ -0.92
BBS9-213	ENST00000495426	HSP90B1	P14625	803 aa	Known RBP	9.3	□□□□□ -0.92
BBS9-213	ENST00000495426	TM4SF4	P48230	202 aa		9.3	□□□□□ -0.92
BBS9-213	ENST00000495426	ANKRD18A	Q8IVF6	992 aa		9.3	□□□□□ -0.92
BBS9-213	ENST00000495426	CCDC146	Q8IYE0	955 aa		9.3	□□□□□ -0.92
BBS9-213	ENST00000495426	PNMA1	Q8ND90	353 aa		9.3	□□□□□ -0.92
BBS9-213	ENST00000495426	SLC6A16	Q9GZN6	736 aa		9.3	□□□□□ -0.92
BBS9-213	ENST00000495426	HYPK	Q9NX55	129 aa		9.3	□□□□□ -0.92
BBS9-213	ENST00000495426	CACNA1F	O60840	1977 aa		9.3	□□□□□ -0.92
BBS9-213	ENST00000495426	WNT10B	O00744	389 aa		9.29	□□□□□ -0.92
BBS9-213	ENST00000495426	PDE8A	O60658	829 aa		9.29	□□□□□ -0.92
BBS9-213	ENST00000495426	SASH1	O94885	1247 aa		9.29	□□□□□ -0.92
BBS9-213	ENST00000495426	PCCA	P05165	728 aa	Predicted RBP	9.29	□□□□□ -0.92
BBS9-213	ENST00000495426	ATP2B4	P23634	1241 aa		9.29	□□□□□ -0.92
BBS9-213	ENST00000495426	PODN	Q7Z5L7	613 aa		9.29	□□□□□ -0.92
BBS9-213	ENST00000495426	MYD88	Q99836	296 aa		9.29	□□□□□ -0.92
BBS9-213	ENST00000495426	NUDT12	Q9BQG2	462 aa		9.29	□□□□□ -0.92
BBS9-213	ENST00000495426	MXD3	Q9BW11	206 aa		9.29	□□□□□ -0.92
BBS9-213	ENST00000495426	CFHR5	Q9BXR6	569 aa		9.29	□□□□□ -0.92
BBS9-213	ENST00000495426	R3HDML	Q9H3Y0	253 aa		9.29	□□□□□ -0.92
BBS9-213	ENST00000495426	C1orf115	Q9H7X2	142 aa		9.29	□□□□□ -0.92
BBS9-213	ENST00000495426	MYO3B	Q8WXR4	1341 aa		9.29	□□□□□ -0.92
BBS9-213	ENST00000495426	SSC5D	A1L4H1	1573 aa		9.29	□□□□□ -0.92
BBS9-213	ENST00000495426	ZSWIM8	A7E2V4	1837 aa		9.28	□□□□□ -0.92
BBS9-213	ENST00000495426	CCNYL3	P0C7X3	344 aa		9.28	□□□□□ -0.92
BBS9-213	ENST00000495426	PTPN12	Q05209	780 aa	Known RBP	9.28	□□□□□ -0.92
BBS9-213	ENST00000495426	IRF5	Q13568	498 aa		9.28	□□□□□ -0.92
BBS9-213	ENST00000495426	PRKG1	Q13976	671 aa		9.28	□□□□□ -0.92
BBS9-213	ENST00000495426	HABP4	Q5JVS0	413 aa	Known RBP	9.28	□□□□□ -0.92
BBS9-213	ENST00000495426	DACT2	Q5SW24	774 aa		9.28	□□□□□ -0.92
BBS9-213	ENST00000495426	DUSP27	Q5VZP5	1158 aa		9.28	□□□□□ -0.92
BBS9-213	ENST00000495426	ARMC9	Q7Z3E5	817 aa		9.28	□□□□□ -0.92
BBS9-213	ENST00000495426	APOBEC3F	Q8IUX4	373 aa	Known RBP	9.28	□□□□□ -0.92
BBS9-213	ENST00000495426	NKX2-3	Q8TAU0	364 aa		9.28	□□□□□ -0.92
BBS9-213	ENST00000495426	JARID2	Q92833	1246 aa	Predicted RBP	9.28	□□□□□ -0.92
BBS9-213	ENST00000495426	PHAX	Q9H814	394 aa	Known RBP	9.28	□□□□□ -0.92
BBS9-213	ENST00000495426	EVA1B	Q9NVM1	165 aa		9.28	□□□□□ -0.92
BBS9-213	ENST00000495426	MAP10	Q9P2G4	905 aa		9.28	□□□□□ -0.92
BBS9-213	ENST00000495426	TRIM17	Q9Y577	477 aa		9.28	□□□□□ -0.92
BBS9-213	ENST00000495426	F12	P00748	615 aa	Predicted RBP	9.27	□□□□□ -0.93
BBS9-213	ENST00000495426	CTSW	P56202	376 aa		9.27	□□□□□ -0.93
BBS9-213	ENST00000495426	SPRYD7	Q5W111	196 aa		9.27	□□□□□ -0.93
BBS9-213	ENST00000495426	OGFOD1	Q8N543	542 aa		9.27	□□□□□ -0.93
BBS9-213	ENST00000495426	CCDC191	Q8NCU4	936 aa		9.27	□□□□□ -0.93
BBS9-213	ENST00000495426	CDC5L	Q99459	802 aa	Known RBP	9.27	□□□□□ -0.93
BBS9-213	ENST00000495426	ARID3A	Q99856	593 aa		9.27	□□□□□ -0.93
BBS9-213	ENST00000495426	CWC25	Q9NXE8	425 aa	Predicted RBP	9.27	□□□□□ -0.93
BBS9-213	ENST00000495426	ANGEL1	Q9UNK9	670 aa	Known RBP	9.27	□□□□□ -0.93
BBS9-213	ENST00000495426	WTIP	A6NIX2	430 aa	Predicted RBP	9.26	□□□□□ -0.93
BBS9-213	ENST00000495426	ALDH1A1	P00352	501 aa		9.26	□□□□□ -0.93
BBS9-213	ENST00000495426	CCT4	P50991	539 aa	Known RBP	9.26	□□□□□ -0.93
BBS9-213	ENST00000495426	KCNC4	Q03721	635 aa		9.26	□□□□□ -0.93
BBS9-213	ENST00000495426	KCNH2	Q12809	1159 aa		9.26	□□□□□ -0.93
BBS9-213	ENST00000495426	STRIP1	Q5VSL9	837 aa		9.26	□□□□□ -0.93
BBS9-213	ENST00000495426	OTOP1	Q7RTM1	612 aa		9.26	□□□□□ -0.93
BBS9-213	ENST00000495426	MBIP	Q9NS73	344 aa		9.26	□□□□□ -0.93
BBS9-213	ENST00000495426	FZD1	Q9UP38	647 aa		9.26	□□□□□ -0.93
BBS9-213	ENST00000495426	SZT2	Q5T011	3432 aa		9.25	□□□□□ -0.93
BBS9-213	ENST00000495426	MANSC4	A6NHS7	340 aa	Predicted RBP	9.25	□□□□□ -0.93
BBS9-213	ENST00000495426	GPR37L1	O60883	481 aa		9.25	□□□□□ -0.93
BBS9-213	ENST00000495426	LDLRAD1	Q5T700	205 aa		9.25	□□□□□ -0.93
BBS9-213	ENST00000495426	INTS3	Q68E01	1043 aa	Known RBP	9.25	□□□□□ -0.93
BBS9-213	ENST00000495426	KIAA0825	Q8IV33	1275 aa		9.25	□□□□□ -0.93
BBS9-213	ENST00000495426	RUNDC1	Q96C34	613 aa		9.25	□□□□□ -0.93
BBS9-213	ENST00000495426	WNK4	Q96J92	1243 aa		9.25	□□□□□ -0.93
BBS9-213	ENST00000495426	COA1	Q9GZY4	146 aa		9.25	□□□□□ -0.93
BBS9-213	ENST00000495426	GREM2	Q9H772	168 aa		9.25	□□□□□ -0.93
BBS9-213	ENST00000495426	FKBPL	Q9UIM3	349 aa		9.25	□□□□□ -0.93
BBS9-213	ENST00000495426	MINPP1	Q9UNW1	487 aa		9.25	□□□□□ -0.93
BBS9-213	ENST00000495426	RANBP2	P49792	3224 aa	Known RBP	9.24	□□□□□ -0.93
BBS9-213	ENST00000495426	IGF2BP3	O00425	579 aa	Known RBP eCLIP	9.24	□□□□□ -0.93
BBS9-213	ENST00000495426	S1PR4	O95977	384 aa		9.24	□□□□□ -0.93
BBS9-213	ENST00000495426	ZBTB48	P10074	688 aa	Predicted RBP	9.24	□□□□□ -0.93
BBS9-213	ENST00000495426	VAC14	Q08AM6	782 aa		9.24	□□□□□ -0.93
BBS9-213	ENST00000495426	WDR43	Q15061	677 aa	Known RBP eCLIP	9.24	□□□□□ -0.93
BBS9-213	ENST00000495426	RALBP1	Q15311	655 aa		9.24	□□□□□ -0.93
BBS9-213	ENST00000495426	TXNRD3	Q86VQ6	643 aa		9.24	□□□□□ -0.93
BBS9-213	ENST00000495426	CD99L2	Q8TCZ2	262 aa		9.24	□□□□□ -0.93
BBS9-213	ENST00000495426	ERO1A	Q96HE7	468 aa		9.24	□□□□□ -0.93
BBS9-213	ENST00000495426	ZBED3	Q96IU2	234 aa	Predicted RBP	9.24	□□□□□ -0.93
BBS9-213	ENST00000495426	CLMN	Q96JQ2	1002 aa		9.24	□□□□□ -0.93
BBS9-213	ENST00000495426	METTL22	Q9BUU2	404 aa	Predicted RBP	9.24	□□□□□ -0.93
BBS9-213	ENST00000495426	BSDC1	Q9NW68	430 aa	Predicted RBP	9.24	□□□□□ -0.93
BBS9-213	ENST00000495426	MYH13	Q9UKX3	1938 aa		9.24	□□□□□ -0.93
BBS9-213	ENST00000495426	MYBBP1A	Q9BQG0	1328 aa	Known RBP	9.24	□□□□□ -0.93
BBS9-213	ENST00000495426	POM121C	A8CG34	1229 aa		9.23	□□□□□ -0.93
BBS9-213	ENST00000495426	ELL2	O00472	640 aa	Predicted RBP	9.23	□□□□□ -0.93
BBS9-213	ENST00000495426	DDX58	O95786	925 aa	Known RBP	9.23	□□□□□ -0.93
BBS9-213	ENST00000495426	KLRK1	P26718	216 aa		9.23	□□□□□ -0.93
BBS9-213	ENST00000495426	MMP14	P50281	582 aa		9.23	□□□□□ -0.93
BBS9-213	ENST00000495426	FXR1	P51114	621 aa	Known RBP eCLIP	9.23	□□□□□ -0.93
BBS9-213	ENST00000495426	MAP3K11	Q16584	847 aa		9.23	□□□□□ -0.93
BBS9-213	ENST00000495426	TTLL5	Q6EMB2	1281 aa		9.23	□□□□□ -0.93
BBS9-213	ENST00000495426	ARMC2	Q8NEN0	867 aa		9.23	□□□□□ -0.93
BBS9-213	ENST00000495426	TTLL11	Q8NHH1	800 aa		9.23	□□□□□ -0.93
BBS9-213	ENST00000495426	SLC10A4	Q96EP9	437 aa		9.23	□□□□□ -0.93
BBS9-213	ENST00000495426	PTPN22	Q9Y2R2	807 aa		9.23	□□□□□ -0.93

Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms