RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 CCDC84Q86UT8 332 aaPredicted RBP11.61□□□□□ -0.55
GARNL3-219ENST00000495172 TTLL11Q8NHH1 800 aa11.61□□□□□ -0.55
GARNL3-219ENST00000495172 SMCR8Q8TEV9 937 aaPredicted RBP11.61□□□□□ -0.55
GARNL3-219ENST00000495172 TRIM43Q96BQ3 446 aaPredicted RBP11.61□□□□□ -0.55
GARNL3-219ENST00000495172 UIMC1Q96RL1 719 aa11.61□□□□□ -0.55
GARNL3-219ENST00000495172 CDC5LQ99459 802 aaKnown RBP11.61□□□□□ -0.55
GARNL3-219ENST00000495172 CD320Q9NPF0 282 aa11.61□□□□□ -0.55
GARNL3-219ENST00000495172 DAGLAQ9Y4D2 1042 aa11.61□□□□□ -0.55
GARNL3-219ENST00000495172 PTPRFP10586 1907 aa11.6□□□□□ -0.55
GARNL3-219ENST00000495172 TRANK1O15050 2925 aa11.6□□□□□ -0.55
GARNL3-219ENST00000495172 PER1O15534 1290 aaPredicted RBP11.6□□□□□ -0.55
GARNL3-219ENST00000495172 PCCAP05165 728 aaPredicted RBP11.6□□□□□ -0.55
GARNL3-219ENST00000495172 KCNJ4P48050 445 aa11.6□□□□□ -0.55
GARNL3-219ENST00000495172 TNNI2P48788 182 aa11.6□□□□□ -0.55
GARNL3-219ENST00000495172 TRIM28Q13263 835 aaKnown RBP11.6□□□□□ -0.55
GARNL3-219ENST00000495172 AKNAD1Q5T1N1 836 aa11.6□□□□□ -0.55
GARNL3-219ENST00000495172 TIFAQ96CG3 184 aa11.6□□□□□ -0.55
GARNL3-219ENST00000495172 FBXL18Q96ME1 805 aa11.6□□□□□ -0.55
GARNL3-219ENST00000495172 TRIOO75962 3097 aa11.59□□□□□ -0.55
GARNL3-219ENST00000495172 MYH3P11055 1940 aa11.59□□□□□ -0.55
GARNL3-219ENST00000495172 ZNF341Q9BYN7 854 aa11.59□□□□□ -0.55
GARNL3-219ENST00000495172 CXXC1Q9P0U4 656 aaPredicted RBP11.59□□□□□ -0.55
GARNL3-219ENST00000495172 DCHS1Q96JQ0 3298 aa11.59□□□□□ -0.55
GARNL3-219ENST00000495172 LRRC37A2A6NM11 1700 aa11.59□□□□□ -0.55
GARNL3-219ENST00000495172 A0A1B0GUL6 1792 aa11.59□□□□□ -0.55
GARNL3-219ENST00000495172 RLFQ13129 1914 aa11.58□□□□□ -0.55
GARNL3-219ENST00000495172 IL1R1P14778 569 aa11.58□□□□□ -0.56
GARNL3-219ENST00000495172 CHRNDQ07001 517 aa11.58□□□□□ -0.56
GARNL3-219ENST00000495172 TRIM60Q495X7 471 aa11.58□□□□□ -0.56
GARNL3-219ENST00000495172 MFSD14BQ5SR56 506 aa11.58□□□□□ -0.56
GARNL3-219ENST00000495172 TREML2Q5T2D2 321 aa11.58□□□□□ -0.56
GARNL3-219ENST00000495172 PDLIM7Q9NR12 457 aa11.58□□□□□ -0.56
GARNL3-219ENST00000495172 ZFHX4Q86UP3 3567 aa11.58□□□□□ -0.56
GARNL3-219ENST00000495172 CACNA1BQ00975 2339 aa11.58□□□□□ -0.56
GARNL3-219ENST00000495172 PHIPQ8WWQ0 1821 aa11.58□□□□□ -0.56
GARNL3-219ENST00000495172 A0A0G2JLL6 359 aaPredicted RBP11.57□□□□□ -0.56
GARNL3-219ENST00000495172 PRRT2Q7Z6L0 340 aaPredicted RBP11.57□□□□□ -0.56
GARNL3-219ENST00000495172 PHAXQ9H814 394 aaKnown RBP11.57□□□□□ -0.56
GARNL3-219ENST00000495172 SERPINA10Q9UK55 444 aa11.57□□□□□ -0.56
GARNL3-219ENST00000495172 ZHX2Q9Y6X8 837 aa11.57□□□□□ -0.56
GARNL3-219ENST00000495172 ZFHX2Q9C0A1 2572 aaPredicted RBP11.56□□□□□ -0.56
GARNL3-219ENST00000495172 KRT37O76014 449 aa11.56□□□□□ -0.56
GARNL3-219ENST00000495172 NUDCQ9Y266 331 aa11.56□□□□□ -0.56
GARNL3-219ENST00000495172 GBF1Q92538 1859 aa11.55□□□□□ -0.56
GARNL3-219ENST00000495172 PRRC2BQ5JSZ5 2229 aaKnown RBP11.55□□□□□ -0.56
GARNL3-219ENST00000495172 FKBP1AP62942 108 aaKnown RBP11.55□□□□□ -0.56
GARNL3-219ENST00000495172 TCP10Q12799 353 aa11.55□□□□□ -0.56
GARNL3-219ENST00000495172 SKIV2LQ15477 1246 aaKnown RBP11.55□□□□□ -0.56
GARNL3-219ENST00000495172 NFE2L2Q16236 605 aa11.55□□□□□ -0.56
GARNL3-219ENST00000495172 GJC2Q5T442 439 aaPredicted RBP11.55□□□□□ -0.56
GARNL3-219ENST00000495172 HDGFL1Q5TGJ6 251 aa11.55□□□□□ -0.56
GARNL3-219ENST00000495172 PBX4Q9BYU1 374 aa11.55□□□□□ -0.56
GARNL3-219ENST00000495172 CWC25Q9NXE8 425 aaPredicted RBP11.55□□□□□ -0.56
GARNL3-219ENST00000495172 ZNF112Q9UJU3 913 aa11.55□□□□□ -0.56
GARNL3-219ENST00000495172 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.54□□□□□ -0.56
GARNL3-219ENST00000495172 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.54□□□□□ -0.56
GARNL3-219ENST00000495172 TRIM75PA6NK02 468 aa11.54□□□□□ -0.56
GARNL3-219ENST00000495172 CXCL11O14625 94 aa11.54□□□□□ -0.56
GARNL3-219ENST00000495172 IGHMBP2P38935 993 aaKnown RBP11.54□□□□□ -0.56
GARNL3-219ENST00000495172 FAM110CQ1W6H9 321 aa11.54□□□□□ -0.56
GARNL3-219ENST00000495172 ANO1Q5XXA6 986 aa11.54□□□□□ -0.56
GARNL3-219ENST00000495172 DCAF15Q66K64 600 aa11.54□□□□□ -0.56
GARNL3-219ENST00000495172 CCDC129Q6ZRS4 1044 aa11.54□□□□□ -0.56
GARNL3-219ENST00000495172 ZNF804AQ7Z570 1209 aa11.54□□□□□ -0.56
GARNL3-219ENST00000495172 CFAP53Q96M91 514 aa11.54□□□□□ -0.56
GARNL3-219ENST00000495172 ANKRD2Q9GZV1 360 aa11.54□□□□□ -0.56
GARNL3-219ENST00000495172 IQSEC3Q9UPP2 1182 aaPredicted RBP11.54□□□□□ -0.56
GARNL3-219ENST00000495172 BAHCC1Q9P281 2608 aa11.54□□□□□ -0.56
GARNL3-219ENST00000495172 MYO15AQ9UKN7 3530 aa11.53□□□□□ -0.56
GARNL3-219ENST00000495172 PI4K2BG5E9Z4 385 aa11.53□□□□□ -0.56
GARNL3-219ENST00000495172 TLL1O43897 1013 aa11.53□□□□□ -0.56
GARNL3-219ENST00000495172 PLIN1O60240 522 aa11.53□□□□□ -0.56
GARNL3-219ENST00000495172 ITGA6P23229 1130 aa11.53□□□□□ -0.56
GARNL3-219ENST00000495172 KRT40Q6A162 431 aa11.53□□□□□ -0.56
GARNL3-219ENST00000495172 SLC39A5Q6ZMH5 540 aa11.53□□□□□ -0.56
GARNL3-219ENST00000495172 FASTKD5Q7L8L6 764 aaKnown RBP11.53□□□□□ -0.56
GARNL3-219ENST00000495172 CCDC191Q8NCU4 936 aa11.53□□□□□ -0.56
GARNL3-219ENST00000495172 FERMT2Q96AC1 680 aa11.53□□□□□ -0.56
GARNL3-219ENST00000495172 AFG3L2Q9Y4W6 797 aa11.53□□□□□ -0.56
GARNL3-219ENST00000495172 ZKSCAN1P17029 563 aaPredicted RBP11.52□□□□□ -0.57
GARNL3-219ENST00000495172 GYG1P46976 350 aa11.52□□□□□ -0.57
GARNL3-219ENST00000495172 EIF4G2P78344 907 aaKnown RBP eCLIP11.52□□□□□ -0.57
GARNL3-219ENST00000495172 NOL9Q5SY16 702 aaKnown RBP11.52□□□□□ -0.57
GARNL3-219ENST00000495172 ZFPM1Q8IX07 1006 aa11.52□□□□□ -0.57
GARNL3-219ENST00000495172 PLEKHF1Q96S99 279 aa11.52□□□□□ -0.57
GARNL3-219ENST00000495172 NKX2-4Q9H2Z4 354 aa11.52□□□□□ -0.57
GARNL3-219ENST00000495172 FLRT1Q9NZU1 646 aa11.52□□□□□ -0.57
GARNL3-219ENST00000495172 ZNF318Q5VUA4 2279 aa11.52□□□□□ -0.57
GARNL3-219ENST00000495172 EPG5Q9HCE0 2579 aa11.51□□□□□ -0.57
GARNL3-219ENST00000495172 PRR33A8MZF0 331 aa11.51□□□□□ -0.57
GARNL3-219ENST00000495172 RFXAPO00287 272 aa11.51□□□□□ -0.57
GARNL3-219ENST00000495172 HSP90B1P14625 803 aaKnown RBP11.51□□□□□ -0.57
GARNL3-219ENST00000495172 PTPRAP18433 802 aa11.51□□□□□ -0.57
GARNL3-219ENST00000495172 NFIAQ12857 509 aa11.51□□□□□ -0.57
GARNL3-219ENST00000495172 APOBEC3HQ6NTF7 200 aaKnown RBP11.51□□□□□ -0.57
GARNL3-219ENST00000495172 MPHOSPH8Q99549 860 aa11.51□□□□□ -0.57
GARNL3-219ENST00000495172 LAS1LQ9Y4W2 734 aaKnown RBP11.51□□□□□ -0.57
GARNL3-219ENST00000495172 NDUFB9Q9Y6M9 179 aa11.51□□□□□ -0.57
GARNL3-219ENST00000495172 IGKV5-2P06315 115 aa11.5□□□□□ -0.57
GARNL3-219ENST00000495172 CNGA1P29973 690 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms