RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 MAST2Q6P0Q8 1798 aa19.34■□□□□ 0.69
LIME1-209ENST00000494776 CTCFP49711 727 aaPredicted RBP19.33■□□□□ 0.68
LIME1-209ENST00000494776 PPP4CP60510 307 aa19.33■□□□□ 0.68
LIME1-209ENST00000494776 MAP3K9P80192 1104 aa19.33■□□□□ 0.68
LIME1-209ENST00000494776 SLC9C2Q5TAH2 1124 aa19.33■□□□□ 0.68
LIME1-209ENST00000494776 MIGA1Q8NAN2 632 aa19.33■□□□□ 0.68
LIME1-209ENST00000494776 ZNF341Q9BYN7 854 aa19.33■□□□□ 0.68
LIME1-209ENST00000494776 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.33■□□□□ 0.68
LIME1-209ENST00000494776 DDX4Q9NQI0 724 aaKnown RBP19.33■□□□□ 0.68
LIME1-209ENST00000494776 CSADQ9Y600 493 aa19.33■□□□□ 0.68
LIME1-209ENST00000494776 CERS3Q8IU89 383 aa19.32■□□□□ 0.68
LIME1-209ENST00000494776 WRNIP1Q96S55 665 aa19.32■□□□□ 0.68
LIME1-209ENST00000494776 AK9Q5TCS8 1911 aa19.31■□□□□ 0.68
LIME1-209ENST00000494776 ERC2O15083 957 aa19.31■□□□□ 0.68
LIME1-209ENST00000494776 FOXN1O15353 648 aa19.31■□□□□ 0.68
LIME1-209ENST00000494776 NPM3O75607 178 aaKnown RBP19.31■□□□□ 0.68
LIME1-209ENST00000494776 PDE6AP16499 860 aa19.31■□□□□ 0.68
LIME1-209ENST00000494776 DYNLL1P63167 89 aaKnown RBP19.31■□□□□ 0.68
LIME1-209ENST00000494776 TSHZ3Q63HK5 1081 aa19.31■□□□□ 0.68
LIME1-209ENST00000494776 REM2Q8IYK8 340 aaPredicted RBP19.31■□□□□ 0.68
LIME1-209ENST00000494776 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.31■□□□□ 0.683e-7■■□□□ 11.4
LIME1-209ENST00000494776 TGFBRAP1Q8WUH2 860 aa19.31■□□□□ 0.68
LIME1-209ENST00000494776 ELP3Q9H9T3 547 aa19.31■□□□□ 0.68
LIME1-209ENST00000494776 THSD7BQ9C0I4 1608 aa19.31■□□□□ 0.68
LIME1-209ENST00000494776 RFX7Q2KHR2 1363 aa19.31■□□□□ 0.68
LIME1-209ENST00000494776 MYO5AQ9Y4I1 1855 aaKnown RBP19.31■□□□□ 0.68
LIME1-209ENST00000494776 DDTLA6NHG4 134 aaPredicted RBP19.3■□□□□ 0.68
LIME1-209ENST00000494776 VGLL4Q14135 290 aa19.3■□□□□ 0.68
LIME1-209ENST00000494776 SPRYD7Q5W111 196 aa19.3■□□□□ 0.68
LIME1-209ENST00000494776 B4GALNT3Q6L9W6 998 aa19.3■□□□□ 0.68
LIME1-209ENST00000494776 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.3■□□□□ 0.68
LIME1-209ENST00000494776 WNK4Q96J92 1243 aa19.3■□□□□ 0.68
LIME1-209ENST00000494776 OSBPL5Q9H0X9 879 aaPredicted RBP19.3■□□□□ 0.68
LIME1-209ENST00000494776 TTC41PQ6P2S7 1318 aa19.29■□□□□ 0.68
LIME1-209ENST00000494776 ZNF532Q9HCE3 1301 aa19.29■□□□□ 0.68
LIME1-209ENST00000494776 MAGEB6P1A0A0J9YX57 407 aa19.29■□□□□ 0.68
LIME1-209ENST00000494776 MX1P20591 662 aa19.29■□□□□ 0.68
LIME1-209ENST00000494776 USP5P45974 858 aa19.29■□□□□ 0.68
LIME1-209ENST00000494776 SH3BP5LQ7L8J4 393 aa19.29■□□□□ 0.68
LIME1-209ENST00000494776 MAPKAPK5Q8IW41 473 aa19.29■□□□□ 0.68
LIME1-209ENST00000494776 PRDM10Q9NQV6 1147 aa19.29■□□□□ 0.68
LIME1-209ENST00000494776 CA12O43570 354 aa19.28■□□□□ 0.68
LIME1-209ENST00000494776 IGHDP01880 384 aa19.28■□□□□ 0.68
LIME1-209ENST00000494776 ZBTB48P10074 688 aaPredicted RBP19.28■□□□□ 0.68
LIME1-209ENST00000494776 SREBF2Q12772 1141 aa19.28■□□□□ 0.68
LIME1-209ENST00000494776 ZSCAN25Q6NSZ9 544 aa19.28■□□□□ 0.68
LIME1-209ENST00000494776 OTUD7AQ8TE49 926 aaPredicted RBP19.28■□□□□ 0.68
LIME1-209ENST00000494776 ZKSCAN4Q969J2 545 aaPredicted RBP19.28■□□□□ 0.68
LIME1-209ENST00000494776 OPTNQ96CV9 577 aa19.28■□□□□ 0.68
LIME1-209ENST00000494776 DOCK2Q92608 1830 aa19.28■□□□□ 0.68
LIME1-209ENST00000494776 GLRX3O76003 335 aaKnown RBP19.27■□□□□ 0.68
LIME1-209ENST00000494776 SMC5Q8IY18 1101 aa19.27■□□□□ 0.68
LIME1-209ENST00000494776 DHX36Q9H2U1 1008 aaKnown RBP19.27■□□□□ 0.68
LIME1-209ENST00000494776 FLT1P17948 1338 aa19.26■□□□□ 0.67
LIME1-209ENST00000494776 MANSC4A6NHS7 340 aaPredicted RBP19.26■□□□□ 0.67
LIME1-209ENST00000494776 INPP5BP32019 993 aa19.26■□□□□ 0.67
LIME1-209ENST00000494776 ADD2P35612 726 aa19.26■□□□□ 0.67
LIME1-209ENST00000494776 LNPKQ9C0E8 428 aa19.26■□□□□ 0.67
LIME1-209ENST00000494776 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.26■□□□□ 0.67
LIME1-209ENST00000494776 TSKSQ9UJT2 592 aa19.26■□□□□ 0.67
LIME1-209ENST00000494776 ZNF112Q9UJU3 913 aa19.26■□□□□ 0.67
LIME1-209ENST00000494776 ATRNL1Q5VV63 1379 aa19.26■□□□□ 0.67
LIME1-209ENST00000494776 LBX1P52954 281 aa19.25■□□□□ 0.67
LIME1-209ENST00000494776 ERO1BQ86YB8 467 aa19.25■□□□□ 0.67
LIME1-209ENST00000494776 OTUD5Q96G74 571 aa19.25■□□□□ 0.67
LIME1-209ENST00000494776 TRIM34Q9BYJ4 488 aa19.25■□□□□ 0.67
LIME1-209ENST00000494776 CRNKL1Q9BZJ0 848 aaKnown RBP19.25■□□□□ 0.67
LIME1-209ENST00000494776 PI4KBQ9UBF8 816 aa19.25■□□□□ 0.67
LIME1-209ENST00000494776 SAP30BPQ9UHR5 308 aaKnown RBP19.25■□□□□ 0.67
LIME1-209ENST00000494776 SNCAIPQ9Y6H5 919 aa19.25■□□□□ 0.67
LIME1-209ENST00000494776 TCRBV5S4A2TA0A5A2 114 aa19.24■□□□□ 0.67
LIME1-209ENST00000494776 TRPA1O75762 1119 aa19.24■□□□□ 0.67
LIME1-209ENST00000494776 HLA-DOAP06340 250 aa19.24■□□□□ 0.67
LIME1-209ENST00000494776 TM4SF4P48230 202 aa19.24■□□□□ 0.67
LIME1-209ENST00000494776 INHBEP58166 350 aa19.24■□□□□ 0.67
LIME1-209ENST00000494776 LRRFIP1Q32MZ4 808 aaKnown RBP19.24■□□□□ 0.67
LIME1-209ENST00000494776 CRACR2BQ8N4Y2 399 aaPredicted RBP19.24■□□□□ 0.67
LIME1-209ENST00000494776 KBTBD3Q8NAB2 608 aa19.24■□□□□ 0.67
LIME1-209ENST00000494776 PI4K2BQ8TCG2 481 aa19.24■□□□□ 0.67
LIME1-209ENST00000494776 CNKSR2Q8WXI2 1034 aa19.24■□□□□ 0.67
LIME1-209ENST00000494776 RIOK1Q9BRS2 568 aaKnown RBP19.24■□□□□ 0.67
LIME1-209ENST00000494776 RNF186Q9NXI6 227 aa19.24■□□□□ 0.67
LIME1-209ENST00000494776 PALD1Q9ULE6 856 aa19.24■□□□□ 0.67
LIME1-209ENST00000494776 COL2A1P02458 1487 aaPredicted RBP19.23■□□□□ 0.67
LIME1-209ENST00000494776 OTOFQ9HC10 1997 aa19.23■□□□□ 0.67
LIME1-209ENST00000494776 SPDYE5A6NIY4 337 aa19.23■□□□□ 0.67
LIME1-209ENST00000494776 TBC1D12O60347 775 aa19.23■□□□□ 0.67
LIME1-209ENST00000494776 HSPA8P11142 646 aaKnown RBP19.23■□□□□ 0.67
LIME1-209ENST00000494776 GJA5P36382 358 aa19.23■□□□□ 0.67
LIME1-209ENST00000494776 UBE3CQ15386 1083 aa19.23■□□□□ 0.67
LIME1-209ENST00000494776 SLC4A8Q2Y0W8 1093 aa19.23■□□□□ 0.67
LIME1-209ENST00000494776 SLFNL1Q499Z3 407 aa19.23■□□□□ 0.67
LIME1-209ENST00000494776 CHD1LQ86WJ1 897 aa19.23■□□□□ 0.67
LIME1-209ENST00000494776 PICK1Q9NRD5 415 aa19.23■□□□□ 0.67
LIME1-209ENST00000494776 SAGE1Q9NXZ1 904 aa19.23■□□□□ 0.67
LIME1-209ENST00000494776 FAM196BA6NMK8 535 aa19.22■□□□□ 0.67
LIME1-209ENST00000494776 PHF20L1A8MW92 1017 aa19.22■□□□□ 0.67
LIME1-209ENST00000494776 MBD4O95243 580 aa19.22■□□□□ 0.67
LIME1-209ENST00000494776 SLURP2P0DP57 97 aa19.22■□□□□ 0.67
LIME1-209ENST00000494776 GTF2A2P52657 109 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms