RNA–Protein interactions for RNA: ENST00000494742.5

PCCB-219, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-219ENST00000494742 SPTY2D1Q68D10 685 aaPredicted RBP18.16■□□□□ 0.5
PCCB-219ENST00000494742 PRRT2Q7Z6L0 340 aaPredicted RBP18.16■□□□□ 0.5
PCCB-219ENST00000494742 ZFPM1Q8IX07 1006 aa18.16■□□□□ 0.5
PCCB-219ENST00000494742 COLQQ9Y215 455 aaPredicted RBP18.16■□□□□ 0.5
PCCB-219ENST00000494742 LRRFIP2Q9Y608 721 aaKnown RBP18.16■□□□□ 0.5
PCCB-219ENST00000494742 ZHX2Q9Y6X8 837 aa18.16■□□□□ 0.5
PCCB-219ENST00000494742 GJB1P08034 283 aa18.15■□□□□ 0.5
PCCB-219ENST00000494742 CAPN2P17655 700 aa18.15■□□□□ 0.5
PCCB-219ENST00000494742 PTPRAP18433 802 aa18.15■□□□□ 0.5
PCCB-219ENST00000494742 GJA8P48165 433 aa18.15■□□□□ 0.5
PCCB-219ENST00000494742 UBXN2AP68543 259 aa18.15■□□□□ 0.5
PCCB-219ENST00000494742 MTFR1Q15390 333 aa18.15■□□□□ 0.5
PCCB-219ENST00000494742 DZIP1Q86YF9 867 aaKnown RBP18.15■□□□□ 0.5
PCCB-219ENST00000494742 SHISA4Q96DD7 197 aa18.15■□□□□ 0.5
PCCB-219ENST00000494742 NOB1Q9ULX3 412 aaKnown RBP18.15■□□□□ 0.5
PCCB-219ENST00000494742 AFG3L2Q9Y4W6 797 aa18.15■□□□□ 0.5
PCCB-219ENST00000494742 DOCK1Q14185 1865 aa18.15■□□□□ 0.5
PCCB-219ENST00000494742 PTPRFP10586 1907 aa18.14■□□□□ 0.49
PCCB-219ENST00000494742 H0YGN5 161 aa18.14■□□□□ 0.49
PCCB-219ENST00000494742 CTNND1O60716 968 aaKnown RBP18.14■□□□□ 0.49
PCCB-219ENST00000494742 RASGRF1Q13972 1273 aa18.14■□□□□ 0.49
PCCB-219ENST00000494742 SLAIN1Q8ND83 568 aa18.14■□□□□ 0.49
PCCB-219ENST00000494742 CDCA7LQ96GN5 454 aa18.14■□□□□ 0.49
PCCB-219ENST00000494742 AKAP2Q9Y2D5 859 aa18.14■□□□□ 0.49
PCCB-219ENST00000494742 NPM3O75607 178 aaKnown RBP18.13■□□□□ 0.49
PCCB-219ENST00000494742 MAP4K4O95819 1239 aaPredicted RBP18.13■□□□□ 0.49
PCCB-219ENST00000494742 CYP2C8P10632 490 aa18.13■□□□□ 0.49
PCCB-219ENST00000494742 CCL5P13501 91 aa18.13■□□□□ 0.49
PCCB-219ENST00000494742 SH3BP5LQ7L8J4 393 aa18.13■□□□□ 0.49
PCCB-219ENST00000494742 ZSCAN29Q8IWY8 852 aaPredicted RBP18.13■□□□□ 0.49
PCCB-219ENST00000494742 ABCF2Q9UG63 623 aa18.13■□□□□ 0.49
PCCB-219ENST00000494742 PA2G4Q9UQ80 394 aaKnown RBP18.13■□□□□ 0.49
PCCB-219ENST00000494742 PHIPQ8WWQ0 1821 aa18.13■□□□□ 0.49
PCCB-219ENST00000494742 TBC1D12O60347 775 aa18.12■□□□□ 0.49
PCCB-219ENST00000494742 ECM2O94769 699 aaPredicted RBP18.12■□□□□ 0.49
PCCB-219ENST00000494742 ADORA1P30542 326 aa18.12■□□□□ 0.49
PCCB-219ENST00000494742 PRKCZQ05513 592 aa18.12■□□□□ 0.49
PCCB-219ENST00000494742 MVPQ14764 893 aaKnown RBP18.12■□□□□ 0.49
PCCB-219ENST00000494742 UBE2Q1Q7Z7E8 422 aa18.12■□□□□ 0.49
PCCB-219ENST00000494742 ARHGAP45Q92619 1136 aa18.12■□□□□ 0.49
PCCB-219ENST00000494742 HTATIP2Q9BUP3 242 aa18.12■□□□□ 0.49
PCCB-219ENST00000494742 RNF208Q9H0X6 261 aa18.12■□□□□ 0.49
PCCB-219ENST00000494742 BIN2Q9UBW5 565 aaPredicted RBP18.12■□□□□ 0.49
PCCB-219ENST00000494742 MROH7-TTC4A0A0A0MT08 1334 aa18.12■□□□□ 0.49
PCCB-219ENST00000494742 GPR75-ASB3A0A0A6YYF3 556 aa18.11■□□□□ 0.49
PCCB-219ENST00000494742 DDTLA6NHG4 134 aaPredicted RBP18.11■□□□□ 0.49
PCCB-219ENST00000494742 GNAI3P08754 354 aa18.11■□□□□ 0.49
PCCB-219ENST00000494742 BTDP43251 543 aa18.11■□□□□ 0.49
PCCB-219ENST00000494742 TIMM10P62072 90 aa18.11■□□□□ 0.49
PCCB-219ENST00000494742 MTX1Q13505 466 aa18.11■□□□□ 0.49
PCCB-219ENST00000494742 PXYLP1Q8TE99 480 aa18.11■□□□□ 0.49
PCCB-219ENST00000494742 MEIS3Q99687 375 aa18.11■□□□□ 0.49
PCCB-219ENST00000494742 CEP290O15078 2479 aa18.11■□□□□ 0.49
PCCB-219ENST00000494742 COL2A1P02458 1487 aaPredicted RBP18.1■□□□□ 0.49
PCCB-219ENST00000494742 A0A1B0GUL7 405 aa18.1■□□□□ 0.49
PCCB-219ENST00000494742 IRF5Q13568 498 aa18.1■□□□□ 0.49
PCCB-219ENST00000494742 GADL1Q6ZQY3 521 aa18.1■□□□□ 0.49
PCCB-219ENST00000494742 ERICH6Q7L0X2 663 aa18.1■□□□□ 0.49
PCCB-219ENST00000494742 DPF3Q92784 378 aa18.1■□□□□ 0.49
PCCB-219ENST00000494742 XAGE2Q96GT9 111 aa18.1■□□□□ 0.49
PCCB-219ENST00000494742 DDX4Q9NQI0 724 aaKnown RBP18.1■□□□□ 0.49
PCCB-219ENST00000494742 SRGAP3O43295 1099 aa18.09■□□□□ 0.49
PCCB-219ENST00000494742 ADCY3O60266 1144 aa18.09■□□□□ 0.49
PCCB-219ENST00000494742 LDHCP07864 332 aa18.09■□□□□ 0.49
PCCB-219ENST00000494742 GSTO1P78417 241 aa18.09■□□□□ 0.49
PCCB-219ENST00000494742 MECOMQ03112 1051 aa18.09■□□□□ 0.49
PCCB-219ENST00000494742 SMCR8Q8TEV9 937 aaPredicted RBP18.09■□□□□ 0.49
PCCB-219ENST00000494742 U2AF1L4Q8WU68 220 aaKnown RBP18.09■□□□□ 0.49
PCCB-219ENST00000494742 TBC1D2Q9BYX2 928 aa18.09■□□□□ 0.49
PCCB-219ENST00000494742 GABRQQ9UN88 632 aa18.09■□□□□ 0.49
PCCB-219ENST00000494742 AGTPBP1Q9UPW5 1226 aa18.09■□□□□ 0.49
PCCB-219ENST00000494742 FLT3LGP49771 235 aa18.08■□□□□ 0.48
PCCB-219ENST00000494742 RHBDL3P58872 404 aa18.08■□□□□ 0.48
PCCB-219ENST00000494742 TFCP2Q12800 502 aa18.08■□□□□ 0.48
PCCB-219ENST00000494742 PICALMQ13492 652 aa18.08■□□□□ 0.48
PCCB-219ENST00000494742 PROCA1Q8NCQ7 364 aaPredicted RBP18.08■□□□□ 0.48
PCCB-219ENST00000494742 OSBPL5Q9H0X9 879 aaPredicted RBP18.08■□□□□ 0.48
PCCB-219ENST00000494742 PNMA3Q9UL41 463 aa18.08■□□□□ 0.48
PCCB-219ENST00000494742 NR2E3Q9Y5X4 410 aa18.08■□□□□ 0.48
PCCB-219ENST00000494742 TRIM75PA6NK02 468 aa18.07■□□□□ 0.48
PCCB-219ENST00000494742 TNPO2O14787 897 aaKnown RBP18.07■□□□□ 0.48
PCCB-219ENST00000494742 SGPL1O95470 568 aa18.07■□□□□ 0.48
PCCB-219ENST00000494742 RARSP54136 660 aaKnown RBP18.07■□□□□ 0.48
PCCB-219ENST00000494742 LOC285556D6RIA3 1793 aa18.07■□□□□ 0.48
PCCB-219ENST00000494742 CHRDL2Q6WN34 429 aa18.06■□□□□ 0.48
PCCB-219ENST00000494742 SPATA5Q8NB90 893 aa18.06■□□□□ 0.48
PCCB-219ENST00000494742 ZNF384Q8TF68 577 aa18.06■□□□□ 0.48
PCCB-219ENST00000494742 COA7Q96BR5 231 aa18.06■□□□□ 0.48
PCCB-219ENST00000494742 UNC93B1Q9H1C4 597 aa18.06■□□□□ 0.48
PCCB-219ENST00000494742 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.06■□□□□ 0.48
PCCB-219ENST00000494742 HMG20BQ9P0W2 317 aa18.06■□□□□ 0.48
PCCB-219ENST00000494742 FARP2O94887 1054 aaPredicted RBP18.05■□□□□ 0.48
PCCB-219ENST00000494742 PABPC4Q13310 644 aaKnown RBP eCLIP18.05■□□□□ 0.48
PCCB-219ENST00000494742 FAM110CQ1W6H9 321 aa18.05■□□□□ 0.48
PCCB-219ENST00000494742 GORABQ5T7V8 394 aa18.05■□□□□ 0.48
PCCB-219ENST00000494742 NSUN4Q96CB9 384 aaKnown RBP18.05■□□□□ 0.48
PCCB-219ENST00000494742 NEUROD6Q96NK8 337 aa18.05■□□□□ 0.48
PCCB-219ENST00000494742 ATAD5Q96QE3 1844 aa18.05■□□□□ 0.48
PCCB-219ENST00000494742 IPO8O15397 1037 aaKnown RBP18.04■□□□□ 0.48
PCCB-219ENST00000494742 INHAP05111 366 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms