RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, human

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MDC1-208	ENST00000494654	NEK4	P51957	841 aa		3.15	□□□□□ -1.91
MDC1-208	ENST00000494654	MRPL12	P52815	198 aa	Known RBP	3.15	□□□□□ -1.91
MDC1-208	ENST00000494654	EVC	P57679	992 aa		3.15	□□□□□ -1.91
MDC1-208	ENST00000494654	KRT85	P78386	507 aa		3.15	□□□□□ -1.91
MDC1-208	ENST00000494654	CRYM	Q14894	314 aa		3.15	□□□□□ -1.91
MDC1-208	ENST00000494654	PDCD2	Q16342	344 aa	Predicted RBP	3.15	□□□□□ -1.91
MDC1-208	ENST00000494654	STX1A	Q16623	288 aa		3.15	□□□□□ -1.91
MDC1-208	ENST00000494654	LRRFIP1	Q32MZ4	808 aa	Known RBP	3.15	□□□□□ -1.91
MDC1-208	ENST00000494654	CCDC30	Q5VVM6	783 aa		3.15	□□□□□ -1.91
MDC1-208	ENST00000494654	AP1AR	Q63HQ0	302 aa		3.15	□□□□□ -1.91
MDC1-208	ENST00000494654	TTLL5	Q6EMB2	1281 aa		3.15	□□□□□ -1.91
MDC1-208	ENST00000494654	DESI1	Q6ICB0	168 aa		3.15	□□□□□ -1.91
MDC1-208	ENST00000494654	FAM43B	Q6ZT52	329 aa	Predicted RBP	3.15	□□□□□ -1.91
MDC1-208	ENST00000494654	RSRC2	Q7L4I2	434 aa	Known RBP	3.15	□□□□□ -1.91
MDC1-208	ENST00000494654	ZNF598	Q86UK7	904 aa	Known RBP	3.15	□□□□□ -1.91
MDC1-208	ENST00000494654	LUZP1	Q86V48	1076 aa		3.15	□□□□□ -1.91
MDC1-208	ENST00000494654	AMOTL1	Q8IY63	956 aa		3.15	□□□□□ -1.91
MDC1-208	ENST00000494654	CEP112	Q8N8E3	955 aa		3.15	□□□□□ -1.91
MDC1-208	ENST00000494654	PRPF38A	Q8NAV1	312 aa	Known RBP	3.15	□□□□□ -1.91
MDC1-208	ENST00000494654	HELB	Q8NG08	1087 aa	Predicted RBP	3.15	□□□□□ -1.91
MDC1-208	ENST00000494654	HNRNPLL	Q8WVV9	542 aa	Known RBP	3.15	□□□□□ -1.91
MDC1-208	ENST00000494654	RABGGTA	Q92696	567 aa		3.15	□□□□□ -1.91
MDC1-208	ENST00000494654	GOLGA1	Q92805	767 aa		3.15	□□□□□ -1.91
MDC1-208	ENST00000494654	MIEF2	Q96C03	454 aa		3.15	□□□□□ -1.91
MDC1-208	ENST00000494654	DDX11	Q96FC9	970 aa		3.15	□□□□□ -1.91
MDC1-208	ENST00000494654	CALR3	Q96L12	384 aa	Known RBP	3.15	□□□□□ -1.91
MDC1-208	ENST00000494654	FUT8	Q9BYC5	575 aa		3.15	□□□□□ -1.91
MDC1-208	ENST00000494654	GBP3	Q9H0R5	595 aa		3.15	□□□□□ -1.91
MDC1-208	ENST00000494654	DCTPP1	Q9H773	170 aa		3.15	□□□□□ -1.91
MDC1-208	ENST00000494654	ARFGAP3	Q9NP61	516 aa		3.15	□□□□□ -1.91
MDC1-208	ENST00000494654	ETAA1	Q9NY74	926 aa		3.15	□□□□□ -1.91
MDC1-208	ENST00000494654	NOB1	Q9ULX3	412 aa	Known RBP	3.15	□□□□□ -1.91
MDC1-208	ENST00000494654	SH3BP1	Q9Y3L3	701 aa		3.15	□□□□□ -1.91
MDC1-208	ENST00000494654	TLL2	Q9Y6L7	1015 aa		3.15	□□□□□ -1.91
MDC1-208	ENST00000494654	ARAP2	Q8WZ64	1704 aa		3.15	□□□□□ -1.91
MDC1-208	ENST00000494654	MRC1	P22897	1456 aa		3.15	□□□□□ -1.91
MDC1-208	ENST00000494654	STRCP1	A6NGW2	1772 aa		3.15	□□□□□ -1.91
MDC1-208	ENST00000494654	C5	P01031	1676 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	ALS2	Q96Q42	1657 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	SBNO1	A3KN83	1393 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	ADCY9	O60503	1353 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	CEMIP	Q8WUJ3	1361 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	GOLGA6L19	H0YKK7	550 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	GFRA3	O60609	400 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	ERLIN1	O75477	346 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	FSBP	O95073	299 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	SKIL	P12757	684 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	MNAT1	P51948	309 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	INHBE	P58166	350 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	ETF1	P62495	437 aa	Known RBP	3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	ADCY2	Q08462	1091 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	APOBR	Q0VD83	1088 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	BIRC2	Q13490	618 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	IQCB1	Q15051	598 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	PLCB4	Q15147	1175 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	LONRF2	Q1L5Z9	754 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	PREPL	Q4J6C6	727 aa	Predicted RBP	3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	DNAJC21	Q5F1R6	531 aa	Known RBP	3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	GORAB	Q5T7V8	394 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	RC3H1	Q5TC82	1133 aa	Known RBP	3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	MEX3C	Q5U5Q3	659 aa	Known RBP	3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	FOXD4L5	Q5VV16	416 aa	Predicted RBP	3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	E4F1	Q66K89	784 aa	Predicted RBP	3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	WWC2	Q6AWC2	1192 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	CPLX2	Q6PUV4	134 aa	Known RBP	3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	LRRC31	Q6UY01	552 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	TTC6	Q86TZ1	520 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	SPATS2	Q86XZ4	545 aa	Known RBP	3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	SIRT2	Q8IXJ6	389 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	ANKRD44	Q8N8A2	993 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	ZNF511	Q8NB15	262 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	MSANTD4	Q8NCY6	345 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	LRRN4CL	Q8ND94	238 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	BICD2	Q8TD16	824 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	AFAP1L1	Q8TED9	768 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	KAT2B	Q92831	832 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	ERCC4	Q92889	916 aa	Predicted RBP	3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	TSR2	Q969E8	191 aa	Known RBP	3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	CCDC34	Q96HJ3	373 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	CABS1	Q96KC9	395 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	MRGPRX2	Q96LB1	330 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	TTC14	Q96N46	770 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	PSMD1	Q99460	953 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	MPHOSPH8	Q99549	860 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	ESYT1	Q9BSJ8	1104 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	PAGR1	Q9BTK6	254 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	CARD14	Q9BXL6	1004 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	API5	Q9BZZ5	524 aa	Known RBP	3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	TRIM6	Q9C030	488 aa	Predicted RBP	3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	NUCKS1	Q9H1E3	243 aa	Known RBP	3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	TNMD	Q9H2S6	317 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	VEZT	Q9HBM0	779 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	VPS18	Q9P253	973 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	NRBP1	Q9UHY1	535 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	DACH1	Q9UI36	760 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	RAB21	Q9UL25	225 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	TBC1D2B	Q9UPU7	963 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	MTMR6	Q9Y217	621 aa		3.14	□□□□□ -1.91
MDC1-208	ENST00000494654	AKAP2	Q9Y2D5	859 aa		3.14	□□□□□ -1.91

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