RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 FBXO31Q5XUX0 539 aaPredicted RBP11.54□□□□□ -0.56
LINC00488-201ENST00000494582 GBP6Q6ZN66 633 aa11.54□□□□□ -0.56
LINC00488-201ENST00000494582 TXNDC2Q86VQ3 553 aa11.54□□□□□ -0.56
LINC00488-201ENST00000494582 SUCLG2Q96I99 432 aa11.54□□□□□ -0.56
LINC00488-201ENST00000494582 HINFPQ9BQA5 517 aa11.54□□□□□ -0.56
LINC00488-201ENST00000494582 AKR1B15C9JRZ8 316 aaPredicted RBP11.53□□□□□ -0.56
LINC00488-201ENST00000494582 STIM1Q13586 685 aa11.53□□□□□ -0.56
LINC00488-201ENST00000494582 RASGRP2Q7LDG7 609 aa11.53□□□□□ -0.56
LINC00488-201ENST00000494582 APTXQ7Z2E3 356 aaKnown RBP11.53□□□□□ -0.56
LINC00488-201ENST00000494582 RPAINQ86UA6 219 aa11.53□□□□□ -0.56
LINC00488-201ENST00000494582 COG1Q8WTW3 980 aa11.53□□□□□ -0.56
LINC00488-201ENST00000494582 ACBD3Q9H3P7 528 aa11.53□□□□□ -0.56
LINC00488-201ENST00000494582 HDAC6Q9UBN7 1215 aa11.53□□□□□ -0.56
LINC00488-201ENST00000494582 IBSPP21815 317 aaPredicted RBP11.53□□□□□ -0.56
LINC00488-201ENST00000494582 USP14P54578 494 aa11.53□□□□□ -0.56
LINC00488-201ENST00000494582 WHAMMP3Q1A5X7 153 aa11.53□□□□□ -0.56
LINC00488-201ENST00000494582 OLFM4Q6UX06 510 aa11.53□□□□□ -0.56
LINC00488-201ENST00000494582 CTCFLQ8NI51 663 aaPredicted RBP11.53□□□□□ -0.56
LINC00488-201ENST00000494582 MIEF2Q96C03 454 aa11.53□□□□□ -0.56
LINC00488-201ENST00000494582 SGSM3Q96HU1 749 aa11.53□□□□□ -0.56
LINC00488-201ENST00000494582 PANX2Q96RD6 677 aa11.53□□□□□ -0.56
LINC00488-201ENST00000494582 NAPGQ99747 312 aaPredicted RBP11.53□□□□□ -0.56
LINC00488-201ENST00000494582 A1CFQ9NQ94 594 aaKnown RBP11.53□□□□□ -0.56
LINC00488-201ENST00000494582 SEC31BQ9NQW1 1179 aa11.53□□□□□ -0.56
LINC00488-201ENST00000494582 EIF3HO15372 352 aaKnown RBP eCLIP11.52□□□□□ -0.56
LINC00488-201ENST00000494582 PAX7P23759 505 aa11.52□□□□□ -0.56
LINC00488-201ENST00000494582 KIF23Q02241 960 aaPredicted RBP11.52□□□□□ -0.56
LINC00488-201ENST00000494582 SLC39A14Q15043 492 aa11.52□□□□□ -0.56
LINC00488-201ENST00000494582 FAM76AQ8TAV0 307 aa11.52□□□□□ -0.56
LINC00488-201ENST00000494582 C8orf76Q96K31 380 aa11.52□□□□□ -0.56
LINC00488-201ENST00000494582 CABS1Q96KC9 395 aa11.52□□□□□ -0.56
LINC00488-201ENST00000494582 AIFM3Q96NN9 605 aa11.52□□□□□ -0.56
LINC00488-201ENST00000494582 POLD4Q9HCU8 107 aa11.52□□□□□ -0.56
LINC00488-201ENST00000494582 C9orf78Q9NZ63 289 aaPredicted RBP11.52□□□□□ -0.56
LINC00488-201ENST00000494582 TRIM10Q9UDY6 481 aa11.52□□□□□ -0.56
LINC00488-201ENST00000494582 MAN1B1Q9UKM7 699 aa11.52□□□□□ -0.56
LINC00488-201ENST00000494582 IGSF1Q8N6C5 1336 aa11.52□□□□□ -0.57
LINC00488-201ENST00000494582 ELF1P32519 619 aa11.52□□□□□ -0.57
LINC00488-201ENST00000494582 GNGT1P63211 74 aa11.52□□□□□ -0.57
LINC00488-201ENST00000494582 MDM2Q00987 491 aaPredicted RBP11.52□□□□□ -0.57
LINC00488-201ENST00000494582 G3BP1Q13283 466 aaKnown RBP eCLIP11.52□□□□□ -0.57
LINC00488-201ENST00000494582 PROSER3Q2NL68 480 aa11.52□□□□□ -0.57
LINC00488-201ENST00000494582 SPECC1Q5M775 1068 aa11.52□□□□□ -0.57
LINC00488-201ENST00000494582 MMS19Q96T76 1030 aa11.52□□□□□ -0.57
LINC00488-201ENST00000494582 MYO6Q9UM54 1294 aa11.52□□□□□ -0.57
LINC00488-201ENST00000494582 SBNO1A3KN83 1393 aa11.51□□□□□ -0.57
LINC00488-201ENST00000494582 GOLGA6CA6NDK9 693 aa11.51□□□□□ -0.57
LINC00488-201ENST00000494582 E7EWF7 191 aa11.51□□□□□ -0.57
LINC00488-201ENST00000494582 RNF225M0QZC1 329 aaPredicted RBP11.51□□□□□ -0.57
LINC00488-201ENST00000494582 SRGAP2O75044 1071 aa11.51□□□□□ -0.57
LINC00488-201ENST00000494582 GOLGA6DP0CG33 693 aa11.51□□□□□ -0.57
LINC00488-201ENST00000494582 DDR1Q08345 913 aa11.51□□□□□ -0.57
LINC00488-201ENST00000494582 PTPAQ15257 358 aa11.51□□□□□ -0.57
LINC00488-201ENST00000494582 SLC9C2Q5TAH2 1124 aa11.51□□□□□ -0.57
LINC00488-201ENST00000494582 CAPS2Q9BXY5 557 aa11.51□□□□□ -0.57
LINC00488-201ENST00000494582 GOLGA6AQ9NYA3 693 aa11.51□□□□□ -0.57
LINC00488-201ENST00000494582 DBNLQ9UJU6 430 aaKnown RBP11.51□□□□□ -0.57
LINC00488-201ENST00000494582 TAOK2Q9UL54 1235 aa11.51□□□□□ -0.57
LINC00488-201ENST00000494582 MAP3K2Q9Y2U5 619 aa11.51□□□□□ -0.57
LINC00488-201ENST00000494582 A0A1B0GTH6 734 aa11.51□□□□□ -0.57
LINC00488-201ENST00000494582 ENC1O14682 589 aa11.51□□□□□ -0.57
LINC00488-201ENST00000494582 MYO1BO43795 1136 aa11.51□□□□□ -0.57
LINC00488-201ENST00000494582 USP8P40818 1118 aa11.51□□□□□ -0.57
LINC00488-201ENST00000494582 ERVK-24P63145 666 aa11.51□□□□□ -0.57
LINC00488-201ENST00000494582 PIP4K2BP78356 416 aa11.51□□□□□ -0.57
LINC00488-201ENST00000494582 SYNE3Q6ZMZ3 975 aa11.51□□□□□ -0.57
LINC00488-201ENST00000494582 DDX46Q7L014 1031 aaKnown RBP11.51□□□□□ -0.57
LINC00488-201ENST00000494582 GRAMD1CQ8IYS0 662 aa11.51□□□□□ -0.57
LINC00488-201ENST00000494582 STAG1Q8WVM7 1258 aa11.51□□□□□ -0.57
LINC00488-201ENST00000494582 N4BP2L2Q92802 583 aaPredicted RBP11.51□□□□□ -0.57
LINC00488-201ENST00000494582 ZNF274Q96GC6 653 aaPredicted RBP11.51□□□□□ -0.57
LINC00488-201ENST00000494582 SELENOOQ9BVL4 669 aa11.51□□□□□ -0.57
LINC00488-201ENST00000494582 MLH3Q9UHC1 1453 aa11.51□□□□□ -0.57
LINC00488-201ENST00000494582 PALLDQ8WX93 1383 aa11.5□□□□□ -0.57
LINC00488-201ENST00000494582 FXR1P51114 621 aaKnown RBP eCLIP11.5□□□□□ -0.57
LINC00488-201ENST00000494582 EIF4A1P60842 406 aaKnown RBP11.5□□□□□ -0.57
LINC00488-201ENST00000494582 PPFIA1Q13136 1202 aa11.5□□□□□ -0.57
LINC00488-201ENST00000494582 TUBB2AQ13885 445 aa11.5□□□□□ -0.57
LINC00488-201ENST00000494582 MCMDC2Q4G0Z9 681 aa11.5□□□□□ -0.57
LINC00488-201ENST00000494582 RESP18Q5W5W9 173 aa11.5□□□□□ -0.57
LINC00488-201ENST00000494582 TUBB2BQ9BVA1 445 aa11.5□□□□□ -0.57
LINC00488-201ENST00000494582 SLC24A3Q9HC58 644 aa11.5□□□□□ -0.57
LINC00488-201ENST00000494582 TFR2Q9UP52 801 aa11.5□□□□□ -0.57
LINC00488-201ENST00000494582 FMN2Q9NZ56 1722 aa11.5□□□□□ -0.57
LINC00488-201ENST00000494582 MFAP3LO75121 409 aa11.5□□□□□ -0.57
LINC00488-201ENST00000494582 FSBPO95073 299 aa11.5□□□□□ -0.57
LINC00488-201ENST00000494582 CASP14P31944 242 aa11.5□□□□□ -0.57
LINC00488-201ENST00000494582 PBX1P40424 430 aa11.5□□□□□ -0.57
LINC00488-201ENST00000494582 INHBEP58166 350 aa11.5□□□□□ -0.57
LINC00488-201ENST00000494582 ACTN3Q08043 901 aaPredicted RBP11.5□□□□□ -0.57
LINC00488-201ENST00000494582 PREPLQ4J6C6 727 aaPredicted RBP11.5□□□□□ -0.57
LINC00488-201ENST00000494582 LRCH2Q5VUJ6 765 aa11.5□□□□□ -0.57
LINC00488-201ENST00000494582 GIMAP7Q8NHV1 300 aa11.5□□□□□ -0.57
LINC00488-201ENST00000494582 RNF217Q8TC41 542 aa11.5□□□□□ -0.57
LINC00488-201ENST00000494582 RRP36Q96EU6 259 aaKnown RBP11.5□□□□□ -0.57
LINC00488-201ENST00000494582 SH3GL2Q99962 352 aa11.5□□□□□ -0.57
LINC00488-201ENST00000494582 HPS5Q9UPZ3 1129 aa11.5□□□□□ -0.57
LINC00488-201ENST00000494582 NALCNQ8IZF0 1738 aa11.5□□□□□ -0.57
LINC00488-201ENST00000494582 FAM237AA0A1B0GTK4 181 aa11.49□□□□□ -0.57
LINC00488-201ENST00000494582 CDC25AP30304 524 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms