RNA–Protein interactions for RNA: ENST00000494557.1

RAF1-212, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 1 (best)

Gene RAF1, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-212ENST00000494557 FAM53CQ9NYF3 392 aa9.91□□□□□ -0.82
RAF1-212ENST00000494557 ZNF213O14771 459 aa9.91□□□□□ -0.82
RAF1-212ENST00000494557 CDC27P30260 824 aa9.91□□□□□ -0.82
RAF1-212ENST00000494557 NOLC1Q14978 699 aaKnown RBP eCLIP9.91□□□□□ -0.82
RAF1-212ENST00000494557 CCDC152Q4G0S7 254 aa9.91□□□□□ -0.82
RAF1-212ENST00000494557 ANO6Q4KMQ2 910 aa9.91□□□□□ -0.82
RAF1-212ENST00000494557 METTL24Q5JXM2 366 aa9.91□□□□□ -0.82
RAF1-212ENST00000494557 AKNAD1Q5T1N1 836 aa9.91□□□□□ -0.82
RAF1-212ENST00000494557 NOL8Q76FK4 1167 aaKnown RBP9.91□□□□□ -0.82
RAF1-212ENST00000494557 TMTC2Q8N394 836 aa9.91□□□□□ -0.82
RAF1-212ENST00000494557 MAP7D2Q96T17 732 aa9.91□□□□□ -0.82
RAF1-212ENST00000494557 TCP11L1Q9NUJ3 509 aa9.91□□□□□ -0.82
RAF1-212ENST00000494557 COL2A1P02458 1487 aaPredicted RBP9.91□□□□□ -0.82
RAF1-212ENST00000494557 PARP14Q460N5 1801 aa9.9□□□□□ -0.82
RAF1-212ENST00000494557 TUBB4AP04350 444 aa9.9□□□□□ -0.82
RAF1-212ENST00000494557 KCNJ4P48050 445 aa9.9□□□□□ -0.82
RAF1-212ENST00000494557 KIAA1468Q9P260 1216 aa9.9□□□□□ -0.82
RAF1-212ENST00000494557 BRCA1P38398 1863 aaKnown RBP9.9□□□□□ -0.82
RAF1-212ENST00000494557 MMP1P03956 469 aa9.9□□□□□ -0.82
RAF1-212ENST00000494557 CCZ1BP86790 482 aa9.9□□□□□ -0.82
RAF1-212ENST00000494557 CCZ1P86791 482 aaPredicted RBP9.9□□□□□ -0.82
RAF1-212ENST00000494557 ANO1Q5XXA6 986 aa9.9□□□□□ -0.82
RAF1-212ENST00000494557 RNF26Q9BY78 433 aaPredicted RBP9.9□□□□□ -0.82
RAF1-212ENST00000494557 PI16Q6UXB8 463 aa9.9□□□□□ -0.83
RAF1-212ENST00000494557 C11orf57Q6ZUT1 292 aaPredicted RBP9.9□□□□□ -0.83
RAF1-212ENST00000494557 DDX54Q8TDD1 881 aaKnown RBP9.9□□□□□ -0.83
RAF1-212ENST00000494557 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.9□□□□□ -0.83
RAF1-212ENST00000494557 IQSEC3Q9UPP2 1182 aaPredicted RBP9.9□□□□□ -0.83
RAF1-212ENST00000494557 TOB1P50616 345 aaPredicted RBP9.89□□□□□ -0.83
RAF1-212ENST00000494557 EVA1CP58658 441 aa9.89□□□□□ -0.83
RAF1-212ENST00000494557 ARID5BQ14865 1188 aa9.89□□□□□ -0.83
RAF1-212ENST00000494557 FAM173BQ6P4H8 233 aa9.89□□□□□ -0.83
RAF1-212ENST00000494557 CCAR1Q8IX12 1150 aaKnown RBP9.89□□□□□ -0.83
RAF1-212ENST00000494557 LINC00116Q8NCU8 138 aa9.89□□□□□ -0.83
RAF1-212ENST00000494557 NEUROD6Q96NK8 337 aa9.89□□□□□ -0.83
RAF1-212ENST00000494557 SPATA31A6Q5VVP1 1343 aa9.89□□□□□ -0.83
RAF1-212ENST00000494557 CUTAO60888 179 aa9.89□□□□□ -0.83
RAF1-212ENST00000494557 WDHD1O75717 1129 aaPredicted RBP9.89□□□□□ -0.83
RAF1-212ENST00000494557 ZNF18P17022 549 aa9.89□□□□□ -0.83
RAF1-212ENST00000494557 NLRP12P59046 1061 aa9.89□□□□□ -0.83
RAF1-212ENST00000494557 TBX2Q13207 712 aaPredicted RBP9.89□□□□□ -0.83
RAF1-212ENST00000494557 SLC9C2Q5TAH2 1124 aa9.89□□□□□ -0.83
RAF1-212ENST00000494557 TRIML1Q8N9V2 468 aa9.89□□□□□ -0.83
RAF1-212ENST00000494557 PHF20Q9BVI0 1012 aa9.89□□□□□ -0.83
RAF1-212ENST00000494557 PDCL3Q9H2J4 239 aa9.89□□□□□ -0.83
RAF1-212ENST00000494557 ANO10Q9NW15 660 aa9.89□□□□□ -0.83
RAF1-212ENST00000494557 NARFQ9UHQ1 456 aa9.89□□□□□ -0.83
RAF1-212ENST00000494557 KLF18A0A0U1RQI7 1052 aa9.88□□□□□ -0.83
RAF1-212ENST00000494557 DDAH1O94760 285 aa9.88□□□□□ -0.83
RAF1-212ENST00000494557 PKN1Q16512 942 aa9.88□□□□□ -0.83
RAF1-212ENST00000494557 SHC4Q6S5L8 630 aa9.88□□□□□ -0.83
RAF1-212ENST00000494557 ADGRA1Q86SQ6 560 aa9.88□□□□□ -0.83
RAF1-212ENST00000494557 TRMT112Q9UI30 125 aaKnown RBP9.88□□□□□ -0.83
RAF1-212ENST00000494557 FBXO2Q9UK22 296 aaPredicted RBP9.88□□□□□ -0.83
RAF1-212ENST00000494557 CLIC4Q9Y696 253 aa9.88□□□□□ -0.83
RAF1-212ENST00000494557 CRY2Q49AN0 593 aa9.88□□□□□ -0.83
RAF1-212ENST00000494557 DAGLBQ8NCG7 672 aa9.88□□□□□ -0.83
RAF1-212ENST00000494557 NCOA5Q9HCD5 579 aaKnown RBP9.88□□□□□ -0.83
RAF1-212ENST00000494557 ZSWIM5Q9P217 1185 aa9.88□□□□□ -0.83
RAF1-212ENST00000494557 PTPREP23469 700 aa9.88□□□□□ -0.83
RAF1-212ENST00000494557 NDUFA8P51970 172 aa9.88□□□□□ -0.83
RAF1-212ENST00000494557 CHRNDQ07001 517 aa9.88□□□□□ -0.83
RAF1-212ENST00000494557 MAP3K12Q12852 859 aa9.88□□□□□ -0.83
RAF1-212ENST00000494557 STK11IPQ8N1F8 1099 aa9.88□□□□□ -0.83
RAF1-212ENST00000494557 CRACR2BQ8N4Y2 399 aaPredicted RBP9.88□□□□□ -0.83
RAF1-212ENST00000494557 WASF1Q92558 559 aa9.88□□□□□ -0.83
RAF1-212ENST00000494557 GPHNQ9NQX3 736 aaPredicted RBP9.88□□□□□ -0.83
RAF1-212ENST00000494557 GOLGA6L6A8MZA4 724 aa9.87□□□□□ -0.83
RAF1-212ENST00000494557 SPTLC2O15270 562 aa9.87□□□□□ -0.83
RAF1-212ENST00000494557 PRPF3O43395 683 aaKnown RBP9.87□□□□□ -0.83
RAF1-212ENST00000494557 DDB1Q16531 1140 aa9.87□□□□□ -0.83
RAF1-212ENST00000494557 FOXD4L5Q5VV16 416 aaPredicted RBP9.87□□□□□ -0.83
RAF1-212ENST00000494557 FCHSD1Q86WN1 690 aa9.87□□□□□ -0.83
RAF1-212ENST00000494557 FOXD4L4Q8WXT5 416 aaPredicted RBP9.87□□□□□ -0.83
RAF1-212ENST00000494557 C8orf76Q96K31 380 aa9.87□□□□□ -0.83
RAF1-212ENST00000494557 ZNF652Q9Y2D9 606 aa9.87□□□□□ -0.83
RAF1-212ENST00000494557 GOLGA8BA8MQT2 603 aa9.87□□□□□ -0.83
RAF1-212ENST00000494557 ZNF165P49910 485 aa9.87□□□□□ -0.83
RAF1-212ENST00000494557 VPS37DQ86XT2 251 aa9.87□□□□□ -0.83
RAF1-212ENST00000494557 LRRC8AQ8IWT6 810 aa9.87□□□□□ -0.83
RAF1-212ENST00000494557 SH3GLB2Q9NR46 395 aa9.87□□□□□ -0.83
RAF1-212ENST00000494557 DENND2AQ9ULE3 1009 aa9.87□□□□□ -0.83
RAF1-212ENST00000494557 PYCARDQ9ULZ3 195 aa9.87□□□□□ -0.83
RAF1-212ENST00000494557 RPS6KA4O75676 772 aa9.86□□□□□ -0.83
RAF1-212ENST00000494557 SMARCA1P28370 1054 aa9.86□□□□□ -0.83
RAF1-212ENST00000494557 PPP4CP60510 307 aa9.86□□□□□ -0.83
RAF1-212ENST00000494557 TROAPQ12815 778 aa9.86□□□□□ -0.83
RAF1-212ENST00000494557 HSP90AA2PQ14568 343 aaPredicted RBP9.86□□□□□ -0.83
RAF1-212ENST00000494557 COBLL1Q53SF7 1204 aa9.86□□□□□ -0.83
RAF1-212ENST00000494557 KRT40Q6A162 431 aa9.86□□□□□ -0.83
RAF1-212ENST00000494557 APTXQ7Z2E3 356 aaKnown RBP9.86□□□□□ -0.83
RAF1-212ENST00000494557 LUZP1Q86V48 1076 aa9.86□□□□□ -0.83
RAF1-212ENST00000494557 CERS3Q8IU89 383 aa9.86□□□□□ -0.83
RAF1-212ENST00000494557 LCORLQ8N3X6 602 aa9.86□□□□□ -0.83
RAF1-212ENST00000494557 RNF41Q9H4P4 317 aaPredicted RBP9.86□□□□□ -0.83
RAF1-212ENST00000494557 SENP2Q9HC62 589 aa9.86□□□□□ -0.83
RAF1-212ENST00000494557 STRN4Q9NRL3 753 aa9.86□□□□□ -0.83
RAF1-212ENST00000494557 DEXIO95424 95 aa9.86□□□□□ -0.83
RAF1-212ENST00000494557 FERMT3Q86UX7 667 aa9.86□□□□□ -0.83
RAF1-212ENST00000494557 TMEM139Q8IV31 216 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms