RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 SNRPNP63162 240 aaKnown RBP7.34□□□□□ -1.23
PTCD3-219ENST00000494323 HCN2Q9UL51 889 aa7.34□□□□□ -1.23
PTCD3-219ENST00000494323 CRB1P82279 1406 aa7.34□□□□□ -1.23
PTCD3-219ENST00000494323 AATKQ6ZMQ8 1374 aa7.33□□□□□ -1.24
PTCD3-219ENST00000494323 COL5A2P05997 1499 aaPredicted RBP7.33□□□□□ -1.24
PTCD3-219ENST00000494323 EXOC5O00471 708 aa7.33□□□□□ -1.24
PTCD3-219ENST00000494323 EGFRP00533 1210 aa7.33□□□□□ -1.24
PTCD3-219ENST00000494323 ZNF16P17020 682 aaPredicted RBP7.33□□□□□ -1.24
PTCD3-219ENST00000494323 NEUROD1Q13562 356 aa7.33□□□□□ -1.24
PTCD3-219ENST00000494323 COL19A1Q14993 1142 aa7.33□□□□□ -1.24
PTCD3-219ENST00000494323 C8orf34Q49A92 452 aa7.33□□□□□ -1.24
PTCD3-219ENST00000494323 GPAT2Q6NUI2 795 aa7.33□□□□□ -1.24
PTCD3-219ENST00000494323 FBXO33Q7Z6M2 555 aa7.33□□□□□ -1.24
PTCD3-219ENST00000494323 ARHGEF25Q86VW2 580 aa7.33□□□□□ -1.24
PTCD3-219ENST00000494323 SIN3AQ96ST3 1273 aa7.33□□□□□ -1.24
PTCD3-219ENST00000494323 KIAA1522Q9P206 1035 aaPredicted RBP7.33□□□□□ -1.24
PTCD3-219ENST00000494323 KCNMB2Q9Y691 235 aa7.33□□□□□ -1.24
PTCD3-219ENST00000494323 NRKQ7Z2Y5 1582 aa7.33□□□□□ -1.24
PTCD3-219ENST00000494323 NUP188Q5SRE5 1749 aa7.32□□□□□ -1.24
PTCD3-219ENST00000494323 TTC21BQ7Z4L5 1316 aa7.32□□□□□ -1.24
PTCD3-219ENST00000494323 LMO7Q8WWI1 1683 aa7.32□□□□□ -1.24
PTCD3-219ENST00000494323 XYLBO75191 536 aa7.32□□□□□ -1.24
PTCD3-219ENST00000494323 NEFLP07196 543 aa7.32□□□□□ -1.24
PTCD3-219ENST00000494323 GRNP28799 593 aaKnown RBP7.32□□□□□ -1.24
PTCD3-219ENST00000494323 SFSWAPQ12872 951 aaKnown RBP7.32□□□□□ -1.24
PTCD3-219ENST00000494323 TXNRD1Q16881 649 aa7.32□□□□□ -1.24
PTCD3-219ENST00000494323 ZNF468Q5VIY5 522 aaPredicted RBP7.32□□□□□ -1.24
PTCD3-219ENST00000494323 PDE12Q6L8Q7 609 aaKnown RBP7.32□□□□□ -1.24
PTCD3-219ENST00000494323 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.32□□□□□ -1.24
PTCD3-219ENST00000494323 ALKBH8Q96BT7 664 aaKnown RBP7.32□□□□□ -1.24
PTCD3-219ENST00000494323 ACSBG1Q96GR2 724 aa7.32□□□□□ -1.24
PTCD3-219ENST00000494323 DCAF5Q96JK2 942 aa7.32□□□□□ -1.24
PTCD3-219ENST00000494323 GGNBP2Q9H3C7 697 aa7.32□□□□□ -1.24
PTCD3-219ENST00000494323 EFCC1Q9HA90 598 aa7.32□□□□□ -1.24
PTCD3-219ENST00000494323 USP20Q9Y2K6 914 aa7.32□□□□□ -1.24
PTCD3-219ENST00000494323 OVOS2A0A0G2JMS6 1433 aa7.32□□□□□ -1.24
PTCD3-219ENST00000494323 OVOS2A0A0J9YW53 1432 aa7.32□□□□□ -1.24
PTCD3-219ENST00000494323 OVOS2Q6IE36 1432 aa7.32□□□□□ -1.24
PTCD3-219ENST00000494323 TOPAZ1Q8N9V7 1692 aa7.32□□□□□ -1.24
PTCD3-219ENST00000494323 RREB1Q92766 1687 aa7.32□□□□□ -1.24
PTCD3-219ENST00000494323 SBF2Q86WG5 1849 aa7.31□□□□□ -1.24
PTCD3-219ENST00000494323 EVC2Q86UK5 1308 aa7.31□□□□□ -1.24
PTCD3-219ENST00000494323 WDR17Q8IZU2 1322 aa7.31□□□□□ -1.24
PTCD3-219ENST00000494323 PIK3R2O00459 728 aa7.31□□□□□ -1.24
PTCD3-219ENST00000494323 TREHO43280 583 aa7.31□□□□□ -1.24
PTCD3-219ENST00000494323 IGHA1P01876 353 aa7.31□□□□□ -1.24
PTCD3-219ENST00000494323 USP6P35125 1406 aa7.31□□□□□ -1.24
PTCD3-219ENST00000494323 PCBP4P57723 403 aaKnown RBP7.31□□□□□ -1.24
PTCD3-219ENST00000494323 CCINQ13939 588 aa7.31□□□□□ -1.24
PTCD3-219ENST00000494323 TRIP4Q15650 581 aaPredicted RBP7.31□□□□□ -1.24
PTCD3-219ENST00000494323 SLC15A2Q16348 729 aa7.31□□□□□ -1.24
PTCD3-219ENST00000494323 XKR5Q6UX68 686 aa7.31□□□□□ -1.24
PTCD3-219ENST00000494323 KCNH5Q8NCM2 988 aa7.31□□□□□ -1.24
PTCD3-219ENST00000494323 BTBD6Q96KE9 485 aa7.31□□□□□ -1.24
PTCD3-219ENST00000494323 CARD10Q9BWT7 1032 aa7.31□□□□□ -1.24
PTCD3-219ENST00000494323 BCL2L13Q9BXK5 485 aa7.31□□□□□ -1.24
PTCD3-219ENST00000494323 IGSF5Q9NSI5 407 aa7.31□□□□□ -1.24
PTCD3-219ENST00000494323 STK32BQ9NY57 414 aa7.31□□□□□ -1.24
PTCD3-219ENST00000494323 RGPD5Q99666 1765 aa7.31□□□□□ -1.24
PTCD3-219ENST00000494323 PARP4Q9UKK3 1724 aaKnown RBP7.3□□□□□ -1.24
PTCD3-219ENST00000494323 GPR182O15218 404 aa7.3□□□□□ -1.24
PTCD3-219ENST00000494323 IGHA2P01877 340 aa7.3□□□□□ -1.24
PTCD3-219ENST00000494323 PLCB3Q01970 1234 aa7.3□□□□□ -1.24
PTCD3-219ENST00000494323 CHSY3Q70JA7 882 aa7.3□□□□□ -1.24
PTCD3-219ENST00000494323 ZNF438Q7Z4V0 828 aa7.3□□□□□ -1.24
PTCD3-219ENST00000494323 FCHSD1Q86WN1 690 aa7.3□□□□□ -1.24
PTCD3-219ENST00000494323 GIPC2Q8TF65 315 aa7.3□□□□□ -1.24
PTCD3-219ENST00000494323 SYT17Q9BSW7 474 aa7.3□□□□□ -1.24
PTCD3-219ENST00000494323 NLRP2Q9NX02 1062 aa7.3□□□□□ -1.24
PTCD3-219ENST00000494323 KLF15Q9UIH9 416 aa7.3□□□□□ -1.24
PTCD3-219ENST00000494323 BRD4O60885 1362 aaPredicted RBP7.3□□□□□ -1.24
PTCD3-219ENST00000494323 COL18A1P39060 1754 aa7.29□□□□□ -1.24
PTCD3-219ENST00000494323 SPEM2Q0P670 501 aa7.29□□□□□ -1.24
PTCD3-219ENST00000494323 DSC3Q14574 896 aa7.29□□□□□ -1.24
PTCD3-219ENST00000494323 GSX2Q9BZM3 304 aa7.29□□□□□ -1.24
PTCD3-219ENST00000494323 NINLQ9Y2I6 1382 aa7.29□□□□□ -1.24
PTCD3-219ENST00000494323 PEAK1Q9H792 1746 aa7.29□□□□□ -1.24
PTCD3-219ENST00000494323 KIAA1210Q9ULL0 1709 aa7.29□□□□□ -1.24
PTCD3-219ENST00000494323 GNB5O14775 395 aa7.28□□□□□ -1.24
PTCD3-219ENST00000494323 HOXB4P17483 251 aaPredicted RBP7.28□□□□□ -1.24
PTCD3-219ENST00000494323 DGKGP49619 791 aa7.28□□□□□ -1.24
PTCD3-219ENST00000494323 TAGLNQ01995 201 aaKnown RBP7.28□□□□□ -1.24
PTCD3-219ENST00000494323 FMR1Q06787 632 aaKnown RBP eCLIP7.28□□□□□ -1.24
PTCD3-219ENST00000494323 GRIN2CQ14957 1233 aa7.28□□□□□ -1.24
PTCD3-219ENST00000494323 PLA2G4EQ3MJ16 856 aa7.28□□□□□ -1.24
PTCD3-219ENST00000494323 SYT9Q86SS6 491 aa7.28□□□□□ -1.24
PTCD3-219ENST00000494323 ALYREFQ86V81 257 aaKnown RBP7.28□□□□□ -1.24
PTCD3-219ENST00000494323 NME9Q86XW9 330 aa7.28□□□□□ -1.24
PTCD3-219ENST00000494323 SNX29Q8TEQ0 813 aa7.28□□□□□ -1.24
PTCD3-219ENST00000494323 PNMA5Q96PV4 448 aa7.28□□□□□ -1.24
PTCD3-219ENST00000494323 NIF3L1Q9GZT8 377 aa7.28□□□□□ -1.24
PTCD3-219ENST00000494323 SLC12A5Q9H2X9 1139 aa7.28□□□□□ -1.24
PTCD3-219ENST00000494323 ELP3Q9H9T3 547 aa7.28□□□□□ -1.24
PTCD3-219ENST00000494323 KTN1Q86UP2 1357 aaKnown RBP7.28□□□□□ -1.24
PTCD3-219ENST00000494323 CPSF1Q10570 1443 aaKnown RBP7.27□□□□□ -1.24
PTCD3-219ENST00000494323 SLIT3O75094 1523 aa7.27□□□□□ -1.25
PTCD3-219ENST00000494323 A6NHS1 94 aa7.27□□□□□ -1.25
PTCD3-219ENST00000494323 IL2RBP14784 551 aa7.27□□□□□ -1.25
PTCD3-219ENST00000494323 FGD1P98174 961 aa7.27□□□□□ -1.25
PTCD3-219ENST00000494323 EAPPQ56P03 285 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms