RNA–Protein interactions for RNA: ENST00000494018.1

NR1H3-225, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 510 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-225ENST00000494018 ATP11BQ9Y2G3 1177 aa12.36□□□□□ -0.43
NR1H3-225ENST00000494018 HCN4Q9Y3Q4 1203 aa12.36□□□□□ -0.43
NR1H3-225ENST00000494018 REV3LO60673 3130 aa12.36□□□□□ -0.43
NR1H3-225ENST00000494018 PIEZO1Q92508 2521 aa12.36□□□□□ -0.43
NR1H3-225ENST00000494018 FRMPD3Q5JV73 1810 aa12.35□□□□□ -0.43
NR1H3-225ENST00000494018 TRIM75PA6NK02 468 aa12.35□□□□□ -0.43
NR1H3-225ENST00000494018 NEURL1BA8MQ27 555 aa12.35□□□□□ -0.43
NR1H3-225ENST00000494018 H7C1W4 665 aa12.35□□□□□ -0.43
NR1H3-225ENST00000494018 HIBADHP31937 336 aaKnown RBP12.35□□□□□ -0.43
NR1H3-225ENST00000494018 CACNB2Q08289 660 aaPredicted RBP12.35□□□□□ -0.43
NR1H3-225ENST00000494018 LMOD3Q0VAK6 560 aa12.35□□□□□ -0.43
NR1H3-225ENST00000494018 APOBEC3HQ6NTF7 200 aaKnown RBP12.35□□□□□ -0.43
NR1H3-225ENST00000494018 FAM83AQ86UY5 434 aa12.35□□□□□ -0.43
NR1H3-225ENST00000494018 ATXN2LQ8WWM7 1075 aaKnown RBP12.35□□□□□ -0.43
NR1H3-225ENST00000494018 TEKT1Q969V4 418 aa12.35□□□□□ -0.43
NR1H3-225ENST00000494018 PNNQ9H307 717 aaKnown RBP12.35□□□□□ -0.43
NR1H3-225ENST00000494018 EPHX3Q9H6B9 360 aa12.35□□□□□ -0.43
NR1H3-225ENST00000494018 THEGQ9P2T0 379 aa12.35□□□□□ -0.43
NR1H3-225ENST00000494018 DDX58O95786 925 aaKnown RBP12.34□□□□□ -0.43
NR1H3-225ENST00000494018 CSF1RP07333 972 aa12.34□□□□□ -0.43
NR1H3-225ENST00000494018 RTP1P59025 263 aa12.34□□□□□ -0.43
NR1H3-225ENST00000494018 CCL14Q16627 93 aa12.34□□□□□ -0.43
NR1H3-225ENST00000494018 NOL9Q5SY16 702 aaKnown RBP12.34□□□□□ -0.43
NR1H3-225ENST00000494018 LHX8Q68G74 356 aa12.34□□□□□ -0.43
NR1H3-225ENST00000494018 ZFPM1Q8IX07 1006 aa12.34□□□□□ -0.43
NR1H3-225ENST00000494018 IL27Q8NEV9 243 aa12.34□□□□□ -0.43
NR1H3-225ENST00000494018 FAM84BQ96KN1 310 aaPredicted RBP12.34□□□□□ -0.43
NR1H3-225ENST00000494018 C1QTNF1Q9BXJ1 281 aa12.34□□□□□ -0.43
NR1H3-225ENST00000494018 MBIPQ9NS73 344 aa12.34□□□□□ -0.43
NR1H3-225ENST00000494018 TRIM35Q9UPQ4 493 aa12.34□□□□□ -0.43
NR1H3-225ENST00000494018 PHIPQ8WWQ0 1821 aa12.33□□□□□ -0.44
NR1H3-225ENST00000494018 PTPRAP18433 802 aa12.33□□□□□ -0.44
NR1H3-225ENST00000494018 MRPS5P82675 430 aaKnown RBP12.33□□□□□ -0.44
NR1H3-225ENST00000494018 NEXNQ0ZGT2 675 aa12.33□□□□□ -0.44
NR1H3-225ENST00000494018 NFIAQ12857 509 aa12.33□□□□□ -0.44
NR1H3-225ENST00000494018 MAP3K21Q5TCX8 1036 aa12.33□□□□□ -0.44
NR1H3-225ENST00000494018 PICK1Q9NRD5 415 aa12.33□□□□□ -0.44
NR1H3-225ENST00000494018 AFG3L2Q9Y4W6 797 aa12.33□□□□□ -0.44
NR1H3-225ENST00000494018 FAM86C2PA6NEL3 165 aa12.32□□□□□ -0.44
NR1H3-225ENST00000494018 FRAT2O75474 233 aaPredicted RBP12.32□□□□□ -0.44
NR1H3-225ENST00000494018 FAM110CQ1W6H9 321 aa12.32□□□□□ -0.44
NR1H3-225ENST00000494018 KSR2Q6VAB6 950 aa12.32□□□□□ -0.44
NR1H3-225ENST00000494018 SH3RF1Q7Z6J0 888 aa12.32□□□□□ -0.44
NR1H3-225ENST00000494018 FAM151AQ8WW52 585 aa12.32□□□□□ -0.44
NR1H3-225ENST00000494018 RNPC3Q96LT9 517 aaKnown RBP12.32□□□□□ -0.44
NR1H3-225ENST00000494018 ZDHHC15Q96MV8 337 aa12.32□□□□□ -0.44
NR1H3-225ENST00000494018 CNNM1Q9NRU3 951 aa12.32□□□□□ -0.44
NR1H3-225ENST00000494018 XIRP2A4UGR9 3374 aa12.32□□□□□ -0.44
NR1H3-225ENST00000494018 DNAJB2P25686 324 aa12.31□□□□□ -0.44
NR1H3-225ENST00000494018 EPHB4P54760 987 aa12.31□□□□□ -0.44
NR1H3-225ENST00000494018 CASP7P55210 303 aa12.31□□□□□ -0.44
NR1H3-225ENST00000494018 IFIT5Q13325 482 aaKnown RBP12.31□□□□□ -0.44
NR1H3-225ENST00000494018 SCYL3Q8IZE3 742 aa12.31□□□□□ -0.44
NR1H3-225ENST00000494018 C8orf58Q8NAV2 365 aa12.31□□□□□ -0.44
NR1H3-225ENST00000494018 PRDM12Q9H4Q4 367 aa12.31□□□□□ -0.44
NR1H3-225ENST00000494018 ZNF576Q9H609 170 aa12.31□□□□□ -0.44
NR1H3-225ENST00000494018 PLXNA1Q9UIW2 1896 aa12.3□□□□□ -0.44
NR1H3-225ENST00000494018 PHF20L1A8MW92 1017 aa12.3□□□□□ -0.44
NR1H3-225ENST00000494018 MYCNP04198 464 aaPredicted RBP12.3□□□□□ -0.44
NR1H3-225ENST00000494018 GCKRQ14397 625 aa12.3□□□□□ -0.44
NR1H3-225ENST00000494018 LDHAL6AQ6ZMR3 332 aa12.3□□□□□ -0.44
NR1H3-225ENST00000494018 PLA2G12BQ9BX93 195 aa12.3□□□□□ -0.44
NR1H3-225ENST00000494018 AGTPBP1Q9UPW5 1226 aa12.3□□□□□ -0.44
NR1H3-225ENST00000494018 SLC45A1Q9Y2W3 748 aa12.3□□□□□ -0.44
NR1H3-225ENST00000494018 TRIM43BA6NCK2 446 aa12.29□□□□□ -0.44
NR1H3-225ENST00000494018 ZKSCAN1P17029 563 aaPredicted RBP12.29□□□□□ -0.44
NR1H3-225ENST00000494018 IGFBP4P22692 258 aa12.29□□□□□ -0.44
NR1H3-225ENST00000494018 CNGA1P29973 690 aa12.29□□□□□ -0.44
NR1H3-225ENST00000494018 TFF2Q03403 129 aa12.29□□□□□ -0.44
NR1H3-225ENST00000494018 TAF7LQ5H9L4 462 aa12.29□□□□□ -0.44
NR1H3-225ENST00000494018 FKBP1CQ5VVH2 108 aa12.29□□□□□ -0.44
NR1H3-225ENST00000494018 G2E3Q7L622 706 aa12.29□□□□□ -0.44
NR1H3-225ENST00000494018 VPS37DQ86XT2 251 aa12.29□□□□□ -0.44
NR1H3-225ENST00000494018 TRIM43Q96BQ3 446 aaPredicted RBP12.29□□□□□ -0.44
NR1H3-225ENST00000494018 GAS2L1Q99501 681 aaPredicted RBP12.29□□□□□ -0.44
NR1H3-225ENST00000494018 FAM198AQ9UFP1 575 aa12.29□□□□□ -0.44
NR1H3-225ENST00000494018 DOCK1Q14185 1865 aa12.29□□□□□ -0.44
NR1H3-225ENST00000494018 RPAP1Q9BWH6 1393 aaPredicted RBP12.29□□□□□ -0.44
NR1H3-225ENST00000494018 DOCK2Q92608 1830 aa12.28□□□□□ -0.44
NR1H3-225ENST00000494018 KCNQ1P51787 676 aa12.28□□□□□ -0.44
NR1H3-225ENST00000494018 HDLBPQ00341 1268 aaKnown RBP12.28□□□□□ -0.44
NR1H3-225ENST00000494018 ADGRE1Q14246 886 aa12.28□□□□□ -0.44
NR1H3-225ENST00000494018 TRIM60Q495X7 471 aa12.28□□□□□ -0.44
NR1H3-225ENST00000494018 TMEM31Q5JXX7 168 aa12.28□□□□□ -0.44
NR1H3-225ENST00000494018 GJC2Q5T442 439 aaPredicted RBP12.28□□□□□ -0.44
NR1H3-225ENST00000494018 ANO1Q5XXA6 986 aa12.28□□□□□ -0.44
NR1H3-225ENST00000494018 CDC42EP5Q6NZY7 148 aa12.28□□□□□ -0.44
NR1H3-225ENST00000494018 MICALL1Q8N3F8 863 aa12.28□□□□□ -0.44
NR1H3-225ENST00000494018 NUDT12Q9BQG2 462 aa12.28□□□□□ -0.44
NR1H3-225ENST00000494018 PUS3Q9BZE2 481 aaKnown RBP12.28□□□□□ -0.44
NR1H3-225ENST00000494018 NDUFB9Q9Y6M9 179 aa12.28□□□□□ -0.44
NR1H3-225ENST00000494018 RLFQ13129 1914 aa12.28□□□□□ -0.44
NR1H3-225ENST00000494018 GRXCR1A8MXD5 290 aa12.27□□□□□ -0.45
NR1H3-225ENST00000494018 ITGB8P26012 769 aa12.27□□□□□ -0.45
NR1H3-225ENST00000494018 PBX2P40425 430 aa12.27□□□□□ -0.45
NR1H3-225ENST00000494018 MRE11P49959 708 aa12.27□□□□□ -0.45
NR1H3-225ENST00000494018 FOXO4P98177 505 aa12.27□□□□□ -0.45
NR1H3-225ENST00000494018 DIXDC1Q155Q3 683 aa12.27□□□□□ -0.45
NR1H3-225ENST00000494018 EPHA10Q5JZY3 1008 aa12.27□□□□□ -0.45
NR1H3-225ENST00000494018 LMBR1LQ6UX01 489 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms