RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 ZNF112Q9UJU3 913 aa27.59■■■□□ 2.01
SNIP1-203ENST00000493916 NDUFB9Q9Y6M9 179 aa27.59■■■□□ 2.01
SNIP1-203ENST00000493916 MYO5AQ9Y4I1 1855 aaKnown RBP27.59■■■□□ 2.01
SNIP1-203ENST00000493916 BAG3O95817 575 aa27.58■■■□□ 2.01
SNIP1-203ENST00000493916 PLCG2P16885 1265 aa27.58■■■□□ 2.01
SNIP1-203ENST00000493916 PPP4CP60510 307 aa27.58■■■□□ 2.01
SNIP1-203ENST00000493916 PICALMQ13492 652 aa27.58■■■□□ 2.01
SNIP1-203ENST00000493916 SH3BP5LQ7L8J4 393 aa27.58■■■□□ 2.01
SNIP1-203ENST00000493916 ADGRA1Q86SQ6 560 aa27.58■■■□□ 2.01
SNIP1-203ENST00000493916 CRBNQ96SW2 442 aa27.58■■■□□ 2.01
SNIP1-203ENST00000493916 ANTXR1Q9H6X2 564 aa27.58■■■□□ 2.01
SNIP1-203ENST00000493916 PCDHB15Q9Y5E8 787 aa27.58■■■□□ 2.01
SNIP1-203ENST00000493916 SNCAIPQ9Y6H5 919 aa27.58■■■□□ 2.01
SNIP1-203ENST00000493916 IDH1O75874 414 aaKnown RBP27.57■■■□□ 2
SNIP1-203ENST00000493916 TTF1Q15361 905 aaPredicted RBP27.57■■■□□ 2
SNIP1-203ENST00000493916 SPDYE5A6NIY4 337 aa27.56■■■□□ 2
SNIP1-203ENST00000493916 ZSCAN29Q8IWY8 852 aaPredicted RBP27.56■■■□□ 2
SNIP1-203ENST00000493916 TEX11Q8IYF3 940 aa27.56■■■□□ 2
SNIP1-203ENST00000493916 SH3RF3Q8TEJ3 882 aaPredicted RBP27.56■■■□□ 2
SNIP1-203ENST00000493916 ZKSCAN4Q969J2 545 aaPredicted RBP27.56■■■□□ 2
SNIP1-203ENST00000493916 AATFQ9NY61 560 aaKnown RBP eCLIP27.56■■■□□ 23e-6■■■□□ 18.2
SNIP1-203ENST00000493916 DDTLA6NHG4 134 aaPredicted RBP27.55■■■□□ 2
SNIP1-203ENST00000493916 MAP3K10Q02779 954 aa27.55■■■□□ 2
SNIP1-203ENST00000493916 MAP3K12Q12852 859 aa27.55■■■□□ 2
SNIP1-203ENST00000493916 CNKSR2Q8WXI2 1034 aa27.55■■■□□ 2
SNIP1-203ENST00000493916 CFHR5Q9BXR6 569 aa27.55■■■□□ 2
SNIP1-203ENST00000493916 OSBPL5Q9H0X9 879 aaPredicted RBP27.55■■■□□ 2
SNIP1-203ENST00000493916 AK9Q5TCS8 1911 aa27.55■■■□□ 2
SNIP1-203ENST00000493916 TESPA1A2RU30 521 aaPredicted RBP27.54■■■□□ 2
SNIP1-203ENST00000493916 ALDH1A1P00352 501 aa27.54■■■□□ 2
SNIP1-203ENST00000493916 ATP5JP18859 108 aa27.54■■■□□ 2
SNIP1-203ENST00000493916 CYP7A1P22680 504 aa27.54■■■□□ 2
SNIP1-203ENST00000493916 INPP5BP32019 993 aa27.54■■■□□ 2
SNIP1-203ENST00000493916 IFFO2Q5TF58 517 aa27.54■■■□□ 2
SNIP1-203ENST00000493916 ERO1BQ86YB8 467 aa27.54■■■□□ 2
SNIP1-203ENST00000493916 IFNL1Q8IU54 200 aa27.54■■■□□ 2
SNIP1-203ENST00000493916 SMARCA5O60264 1052 aaPredicted RBP27.53■■■□□ 2
SNIP1-203ENST00000493916 NOL9Q5SY16 702 aaKnown RBP27.53■■■□□ 2
SNIP1-203ENST00000493916 CERS3Q8IU89 383 aa27.53■■■□□ 2
SNIP1-203ENST00000493916 MAGEB6Q8N7X4 407 aa27.53■■■□□ 2
SNIP1-203ENST00000493916 OTUD5Q96G74 571 aa27.53■■■□□ 2
SNIP1-203ENST00000493916 BCL11AQ9H165 835 aa27.53■■■□□ 2
SNIP1-203ENST00000493916 MS4A4AQ96JQ5 239 aa27.52■■■□□ 2
SNIP1-203ENST00000493916 FOCADQ5VW36 1801 aa27.52■■■□□ 2
SNIP1-203ENST00000493916 PHF20L1A8MW92 1017 aa27.51■■□□□ 1.99
SNIP1-203ENST00000493916 IGF2BP3O00425 579 aaKnown RBP eCLIP27.51■■□□□ 1.99
SNIP1-203ENST00000493916 GTF2A2P52657 109 aa27.51■■□□□ 1.99
SNIP1-203ENST00000493916 AAMPQ13685 434 aa27.51■■□□□ 1.99
SNIP1-203ENST00000493916 DNAJC2Q99543 621 aaKnown RBP27.51■■□□□ 1.99
SNIP1-203ENST00000493916 GOLIM4O00461 696 aa27.5■■□□□ 1.99
SNIP1-203ENST00000493916 TBC1D12O60347 775 aa27.5■■□□□ 1.99
SNIP1-203ENST00000493916 PPATQ06203 517 aa27.5■■□□□ 1.99
SNIP1-203ENST00000493916 PPIL2Q13356 520 aa27.5■■□□□ 1.99
SNIP1-203ENST00000493916 NOM1Q5C9Z4 860 aaKnown RBP27.5■■□□□ 1.99
SNIP1-203ENST00000493916 HAUS7Q99871 368 aa27.5■■□□□ 1.99
SNIP1-203ENST00000493916 CDK5RAP2Q96SN8 1893 aa27.5■■□□□ 1.99
SNIP1-203ENST00000493916 FLT1P17948 1338 aa27.49■■□□□ 1.99
SNIP1-203ENST00000493916 TBC1D8O95759 1140 aa27.49■■□□□ 1.99
SNIP1-203ENST00000493916 OTUD7BQ6GQQ9 843 aa27.49■■□□□ 1.99
SNIP1-203ENST00000493916 BOLA2Q9H3K6 86 aa27.49■■□□□ 1.99
SNIP1-203ENST00000493916 PAG1Q9NWQ8 432 aa27.49■■□□□ 1.99
SNIP1-203ENST00000493916 TGFBRAP1Q8WUH2 860 aa27.48■■□□□ 1.99
SNIP1-203ENST00000493916 PTPN18Q99952 460 aa27.48■■□□□ 1.99
SNIP1-203ENST00000493916 DHX36Q9H2U1 1008 aaKnown RBP27.48■■□□□ 1.99
SNIP1-203ENST00000493916 PDE6AP16499 860 aa27.47■■□□□ 1.99
SNIP1-203ENST00000493916 DYNLL1P63167 89 aaKnown RBP27.47■■□□□ 1.99
SNIP1-203ENST00000493916 SCYL3Q8IZE3 742 aa27.47■■□□□ 1.99
SNIP1-203ENST00000493916 MIGA1Q8NAN2 632 aa27.47■■□□□ 1.99
SNIP1-203ENST00000493916 BRI3BPQ8WY22 251 aa27.47■■□□□ 1.99
SNIP1-203ENST00000493916 ECHDC1Q9NTX5 307 aa27.47■■□□□ 1.99
SNIP1-203ENST00000493916 CASP8AP2Q9UKL3 1982 aa27.46■■□□□ 1.99
SNIP1-203ENST00000493916 CCL15-CCL14A0A0B4J2E2 113 aa27.46■■□□□ 1.99
SNIP1-203ENST00000493916 IRF6O14896 467 aa27.46■■□□□ 1.99
SNIP1-203ENST00000493916 SNAPC2Q13487 334 aa27.46■■□□□ 1.99
SNIP1-203ENST00000493916 CCL15Q16663 113 aa27.46■■□□□ 1.99
SNIP1-203ENST00000493916 SLC9C2Q5TAH2 1124 aa27.46■■□□□ 1.99
SNIP1-203ENST00000493916 MAPKAPK5Q8IW41 473 aa27.46■■□□□ 1.99
SNIP1-203ENST00000493916 EDC3Q96F86 508 aaKnown RBP27.46■■□□□ 1.99
SNIP1-203ENST00000493916 CTNND1O60716 968 aaKnown RBP27.45■■□□□ 1.98
SNIP1-203ENST00000493916 CETPP11597 493 aa27.45■■□□□ 1.98
SNIP1-203ENST00000493916 GPATCH3Q96I76 525 aa27.45■■□□□ 1.98
SNIP1-203ENST00000493916 DOCK1Q14185 1865 aa27.44■■□□□ 1.98
SNIP1-203ENST00000493916 SIPA1L1O43166 1804 aa27.44■■□□□ 1.98
SNIP1-203ENST00000493916 TCRBV5S4A2TA0A5A2 114 aa27.44■■□□□ 1.98
SNIP1-203ENST00000493916 GPR25O00155 361 aa27.44■■□□□ 1.98
SNIP1-203ENST00000493916 SLURP2P0DP57 97 aa27.44■■□□□ 1.98
SNIP1-203ENST00000493916 HDAC1Q13547 482 aaPredicted RBP27.44■■□□□ 1.98
SNIP1-203ENST00000493916 RIOK1Q9BRS2 568 aaKnown RBP27.44■■□□□ 1.98
SNIP1-203ENST00000493916 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.44■■□□□ 1.98
SNIP1-203ENST00000493916 PI4KBQ9UBF8 816 aa27.44■■□□□ 1.98
SNIP1-203ENST00000493916 HERC5Q9UII4 1024 aaKnown RBP27.44■■□□□ 1.98
SNIP1-203ENST00000493916 KCNH4Q9UQ05 1017 aa27.44■■□□□ 1.98
SNIP1-203ENST00000493916 R3HDMLQ9H3Y0 253 aa27.43■■□□□ 1.98
SNIP1-203ENST00000493916 PICK1Q9NRD5 415 aa27.43■■□□□ 1.98
SNIP1-203ENST00000493916 ZNF532Q9HCE3 1301 aa27.42■■□□□ 1.98
SNIP1-203ENST00000493916 METTL16Q86W50 562 aaKnown RBP27.42■■□□□ 1.98
SNIP1-203ENST00000493916 ZNF296Q8WUU4 475 aaPredicted RBP27.42■■□□□ 1.98
SNIP1-203ENST00000493916 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.42■■□□□ 1.98
SNIP1-203ENST00000493916 ZCCHC17Q9NP64 241 aaKnown RBP27.42■■□□□ 1.98
SNIP1-203ENST00000493916 MAGEB6P1A0A0J9YX57 407 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms