RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 ZNF530Q6P9A1 599 aaPredicted RBP8.54□□□□□ -1.04
TRA2B-216ENST00000493864 SND1Q7KZF4 910 aaKnown RBP eCLIP8.54□□□□□ -1.04
TRA2B-216ENST00000493864 CMTR1Q8N1G2 835 aaKnown RBP8.54□□□□□ -1.04
TRA2B-216ENST00000493864 EDEM1Q92611 657 aa8.54□□□□□ -1.04
TRA2B-216ENST00000493864 IRF7Q92985 503 aa8.54□□□□□ -1.04
TRA2B-216ENST00000493864 ZNF775Q96BV0 537 aaPredicted RBP8.54□□□□□ -1.04
TRA2B-216ENST00000493864 FAM13BQ9NYF5 915 aa8.54□□□□□ -1.04
TRA2B-216ENST00000493864 KCNH4Q9UQ05 1017 aa8.54□□□□□ -1.04
TRA2B-216ENST00000493864 SPATA31A1Q5TZJ5 1347 aa8.54□□□□□ -1.04
TRA2B-216ENST00000493864 ZNF521Q96K83 1311 aa8.54□□□□□ -1.04
TRA2B-216ENST00000493864 KAT6BQ8WYB5 2073 aa8.53□□□□□ -1.04
TRA2B-216ENST00000493864 FAM208AQ9UK61 1670 aaKnown RBP8.53□□□□□ -1.04
TRA2B-216ENST00000493864 VSIG8P0DPA2 414 aa8.53□□□□□ -1.04
TRA2B-216ENST00000493864 NFX1Q12986 1120 aaKnown RBP8.53□□□□□ -1.04
TRA2B-216ENST00000493864 ZCRB1Q8TBF4 217 aaKnown RBP8.53□□□□□ -1.04
TRA2B-216ENST00000493864 PIK3R5Q8WYR1 880 aa8.53□□□□□ -1.04
TRA2B-216ENST00000493864 THUMPD2Q9BTF0 503 aaKnown RBP8.53□□□□□ -1.04
TRA2B-216ENST00000493864 CCDC87Q9NVE4 849 aa8.53□□□□□ -1.04
TRA2B-216ENST00000493864 MARK1Q9P0L2 795 aa8.53□□□□□ -1.04
TRA2B-216ENST00000493864 HCN2Q9UL51 889 aa8.53□□□□□ -1.04
TRA2B-216ENST00000493864 SPG7Q9UQ90 795 aa8.53□□□□□ -1.04
TRA2B-216ENST00000493864 RTCBQ9Y3I0 505 aaKnown RBP8.53□□□□□ -1.04
TRA2B-216ENST00000493864 MEGF6O75095 1541 aa8.53□□□□□ -1.04
TRA2B-216ENST00000493864 GNAT3A8MTJ3 354 aa8.52□□□□□ -1.05
TRA2B-216ENST00000493864 CYP27B1O15528 508 aa8.52□□□□□ -1.05
TRA2B-216ENST00000493864 LAMC2Q13753 1193 aa8.52□□□□□ -1.05
TRA2B-216ENST00000493864 GAS6Q14393 721 aa8.52□□□□□ -1.05
TRA2B-216ENST00000493864 GRIN2CQ14957 1233 aa8.52□□□□□ -1.05
TRA2B-216ENST00000493864 MCM10Q7L590 875 aa8.52□□□□□ -1.05
TRA2B-216ENST00000493864 WDR63Q8IWG1 891 aa8.52□□□□□ -1.05
TRA2B-216ENST00000493864 IL17REQ8NFR9 667 aa8.52□□□□□ -1.05
TRA2B-216ENST00000493864 COL25A1Q9BXS0 654 aaPredicted RBP8.52□□□□□ -1.05
TRA2B-216ENST00000493864 LGR6Q9HBX8 967 aa8.52□□□□□ -1.05
TRA2B-216ENST00000493864 HTATSF1O43719 755 aaKnown RBP8.51□□□□□ -1.05
TRA2B-216ENST00000493864 FZD6O60353 706 aa8.51□□□□□ -1.05
TRA2B-216ENST00000493864 WFS1O76024 890 aa8.51□□□□□ -1.05
TRA2B-216ENST00000493864 GRNP28799 593 aaKnown RBP8.51□□□□□ -1.05
TRA2B-216ENST00000493864 KCNQ4P56696 695 aa8.51□□□□□ -1.05
TRA2B-216ENST00000493864 CTBSQ01459 385 aa8.51□□□□□ -1.05
TRA2B-216ENST00000493864 SLFN5Q08AF3 891 aa8.51□□□□□ -1.05
TRA2B-216ENST00000493864 LMOD3Q0VAK6 560 aa8.51□□□□□ -1.05
TRA2B-216ENST00000493864 PDE3BQ13370 1112 aa8.51□□□□□ -1.05
TRA2B-216ENST00000493864 AKAP4Q5JQC9 854 aa8.51□□□□□ -1.05
TRA2B-216ENST00000493864 C1orf141Q5JVX7 400 aa8.51□□□□□ -1.05
TRA2B-216ENST00000493864 FAM182BQ5T319 152 aa8.51□□□□□ -1.05
TRA2B-216ENST00000493864 MPRIPQ6WCQ1 1025 aa8.51□□□□□ -1.05
TRA2B-216ENST00000493864 DDX54Q8TDD1 881 aaKnown RBP8.51□□□□□ -1.05
TRA2B-216ENST00000493864 RTF1Q92541 710 aaKnown RBP8.51□□□□□ -1.05
TRA2B-216ENST00000493864 BRPF3Q9ULD4 1205 aa8.51□□□□□ -1.05
TRA2B-216ENST00000493864 POLIQ9UNA4 740 aa8.51□□□□□ -1.05
TRA2B-216ENST00000493864 THRAP3Q9Y2W1 955 aaKnown RBP8.51□□□□□ -1.05
TRA2B-216ENST00000493864 DLG5Q8TDM6 1919 aa8.5□□□□□ -1.05
TRA2B-216ENST00000493864 MAP3K5Q99683 1374 aa8.5□□□□□ -1.05
TRA2B-216ENST00000493864 SBF2Q86WG5 1849 aa8.5□□□□□ -1.05
TRA2B-216ENST00000493864 OVOS2A0A0G2JMS6 1433 aa8.5□□□□□ -1.05
TRA2B-216ENST00000493864 DISP2A7MBM2 1401 aa8.5□□□□□ -1.05
TRA2B-216ENST00000493864 EXOC5O00471 708 aa8.5□□□□□ -1.05
TRA2B-216ENST00000493864 RNMTO43148 476 aaKnown RBP8.5□□□□□ -1.05
TRA2B-216ENST00000493864 NDUFB5O43674 189 aa8.5□□□□□ -1.05
TRA2B-216ENST00000493864 PDGFAP04085 211 aa8.5□□□□□ -1.05
TRA2B-216ENST00000493864 PHKG2P15735 406 aa8.5□□□□□ -1.05
TRA2B-216ENST00000493864 MX2P20592 715 aa8.5□□□□□ -1.05
TRA2B-216ENST00000493864 MZF1P28698 734 aaPredicted RBP8.5□□□□□ -1.05
TRA2B-216ENST00000493864 RNFT1Q5M7Z0 435 aa8.5□□□□□ -1.05
TRA2B-216ENST00000493864 TRMT2AQ8IZ69 625 aaKnown RBP8.5□□□□□ -1.05
TRA2B-216ENST00000493864 IFNL2Q8IZJ0 200 aa8.5□□□□□ -1.05
TRA2B-216ENST00000493864 TNS1Q9HBL0 1735 aaKnown RBP8.5□□□□□ -1.05
TRA2B-216ENST00000493864 PARP4Q9UKK3 1724 aaKnown RBP8.5□□□□□ -1.05
TRA2B-216ENST00000493864 LAS1LQ9Y4W2 734 aaKnown RBP8.5□□□□□ -1.05
TRA2B-216ENST00000493864 CENPBP07199 599 aaPredicted RBP8.49□□□□□ -1.05
TRA2B-216ENST00000493864 BMP4P12644 408 aa8.49□□□□□ -1.05
TRA2B-216ENST00000493864 PCSK2P16519 638 aa8.49□□□□□ -1.05
TRA2B-216ENST00000493864 MAPK1P28482 360 aa8.49□□□□□ -1.05
TRA2B-216ENST00000493864 TTC16Q8NEE8 873 aa8.49□□□□□ -1.05
TRA2B-216ENST00000493864 SLC30A3Q99726 388 aa8.49□□□□□ -1.05
TRA2B-216ENST00000493864 MIS18AQ9NYP9 233 aa8.49□□□□□ -1.05
TRA2B-216ENST00000493864 KCNMB2Q9Y691 235 aa8.49□□□□□ -1.05
TRA2B-216ENST00000493864 LRRC37A3O60309 1634 aa8.49□□□□□ -1.05
TRA2B-216ENST00000493864 IL16Q14005 1332 aa8.49□□□□□ -1.05
TRA2B-216ENST00000493864 E9PSI1 815 aa8.48□□□□□ -1.05
TRA2B-216ENST00000493864 XYLBO75191 536 aa8.48□□□□□ -1.05
TRA2B-216ENST00000493864 ZNF853P0CG23 659 aa8.48□□□□□ -1.05
TRA2B-216ENST00000493864 CALD1Q05682 793 aaKnown RBP8.48□□□□□ -1.05
TRA2B-216ENST00000493864 SPEM2Q0P670 501 aa8.48□□□□□ -1.05
TRA2B-216ENST00000493864 TRIP4Q15650 581 aaPredicted RBP8.48□□□□□ -1.05
TRA2B-216ENST00000493864 C8orf34Q49A92 452 aa8.48□□□□□ -1.05
TRA2B-216ENST00000493864 LCE2CQ5TA81 110 aa8.48□□□□□ -1.05
TRA2B-216ENST00000493864 TMCO4Q5TGY1 634 aa8.48□□□□□ -1.05
TRA2B-216ENST00000493864 DUSP27Q5VZP5 1158 aa8.48□□□□□ -1.05
TRA2B-216ENST00000493864 RAB44Q7Z6P3 723 aaPredicted RBP8.48□□□□□ -1.05
TRA2B-216ENST00000493864 TSR2Q969E8 191 aaKnown RBP8.48□□□□□ -1.05
TRA2B-216ENST00000493864 MBIPQ9NS73 344 aa8.48□□□□□ -1.05
TRA2B-216ENST00000493864 PRR12Q9ULL5 1215 aa8.48□□□□□ -1.05
TRA2B-216ENST00000493864 PLEKHG2Q9H7P9 1386 aa8.48□□□□□ -1.05
TRA2B-216ENST00000493864 CHL1O00533 1208 aa8.47□□□□□ -1.05
TRA2B-216ENST00000493864 C2CD2LO14523 706 aa8.47□□□□□ -1.05
TRA2B-216ENST00000493864 MARSP56192 900 aaKnown RBP8.47□□□□□ -1.05
TRA2B-216ENST00000493864 GNAI1P63096 354 aa8.47□□□□□ -1.05
TRA2B-216ENST00000493864 CCINQ13939 588 aa8.47□□□□□ -1.05
TRA2B-216ENST00000493864 TAF7Q15545 349 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms