RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 CNNM4Q6P4Q7 775 aa8.74□□□□□ -1.01
BRCA1-221ENST00000493795 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.74□□□□□ -1.01
BRCA1-221ENST00000493795 NUP58Q9BVL2 599 aa8.74□□□□□ -1.01
BRCA1-221ENST00000493795 ARHGAP5Q13017 1502 aa8.74□□□□□ -1.01
BRCA1-221ENST00000493795 PIK3R4Q99570 1358 aa8.74□□□□□ -1.01
BRCA1-221ENST00000493795 SMARCA2P51531 1590 aa8.73□□□□□ -1.01
BRCA1-221ENST00000493795 PLCD1P51178 756 aa8.73□□□□□ -1.01
BRCA1-221ENST00000493795 ARHGAP4P98171 946 aa8.73□□□□□ -1.01
BRCA1-221ENST00000493795 OGFOD1Q8N543 542 aa8.73□□□□□ -1.01
BRCA1-221ENST00000493795 IGSF22Q8N9C0 903 aa8.73□□□□□ -1.01
BRCA1-221ENST00000493795 THUMPD2Q9BTF0 503 aaKnown RBP8.73□□□□□ -1.01
BRCA1-221ENST00000493795 CTTNBP2NLQ9P2B4 639 aa8.73□□□□□ -1.01
BRCA1-221ENST00000493795 RIPOR2Q9Y4F9 1068 aa8.73□□□□□ -1.01
BRCA1-221ENST00000493795 RNASE9P60153 205 aaKnown RBP8.73□□□□□ -1.01
BRCA1-221ENST00000493795 ANKLE2Q86XL3 938 aa8.73□□□□□ -1.01
BRCA1-221ENST00000493795 BANK1Q8NDB2 785 aa8.73□□□□□ -1.01
BRCA1-221ENST00000493795 NLRP7Q8WX94 980 aa8.73□□□□□ -1.01
BRCA1-221ENST00000493795 LRRC2Q9BYS8 371 aa8.73□□□□□ -1.01
BRCA1-221ENST00000493795 SPC25Q9HBM1 224 aa8.73□□□□□ -1.01
BRCA1-221ENST00000493795 ELP1O95163 1332 aa8.73□□□□□ -1.01
BRCA1-221ENST00000493795 MAGEB6P1A0A0J9YX57 407 aa8.73□□□□□ -1.01
BRCA1-221ENST00000493795 RNF8O76064 485 aa8.73□□□□□ -1.01
BRCA1-221ENST00000493795 XRCC6P12956 609 aaKnown RBP eCLIP8.73□□□□□ -1.01
BRCA1-221ENST00000493795 PHBP35232 272 aa8.73□□□□□ -1.01
BRCA1-221ENST00000493795 TBC1D8BQ0IIM8 1120 aa8.73□□□□□ -1.01
BRCA1-221ENST00000493795 DCUN1D2Q6PH85 259 aa8.73□□□□□ -1.01
BRCA1-221ENST00000493795 ZNF804AQ7Z570 1209 aa8.73□□□□□ -1.01
BRCA1-221ENST00000493795 SPATS2Q86XZ4 545 aaKnown RBP8.73□□□□□ -1.01
BRCA1-221ENST00000493795 CDAN1Q8IWY9 1227 aa8.73□□□□□ -1.01
BRCA1-221ENST00000493795 CCDC105Q8IYK2 499 aa8.73□□□□□ -1.01
BRCA1-221ENST00000493795 DRC3Q9H069 523 aa8.73□□□□□ -1.01
BRCA1-221ENST00000493795 RBM8AQ9Y5S9 174 aaKnown RBP8.73□□□□□ -1.01
BRCA1-221ENST00000493795 CEP104O60308 925 aa8.73□□□□□ -1.01
BRCA1-221ENST00000493795 SLC9C1Q4G0N8 1177 aa8.73□□□□□ -1.01
BRCA1-221ENST00000493795 TBC1D32Q96NH3 1257 aa8.73□□□□□ -1.01
BRCA1-221ENST00000493795 RABEP2Q9H5N1 569 aa8.73□□□□□ -1.01
BRCA1-221ENST00000493795 EFCC1Q9HA90 598 aa8.73□□□□□ -1.01
BRCA1-221ENST00000493795 USTQ9Y2C2 406 aa8.73□□□□□ -1.01
BRCA1-221ENST00000493795 STK24Q9Y6E0 443 aa8.73□□□□□ -1.01
BRCA1-221ENST00000493795 CECR2Q9BXF3 1484 aa8.73□□□□□ -1.01
BRCA1-221ENST00000493795 RASIP1Q5U651 963 aa8.73□□□□□ -1.01
BRCA1-221ENST00000493795 RIOK1Q9BRS2 568 aaKnown RBP8.73□□□□□ -1.01
BRCA1-221ENST00000493795 ESYT2A0FGR8 921 aa8.72□□□□□ -1.01
BRCA1-221ENST00000493795 LPXNO60711 386 aa8.72□□□□□ -1.01
BRCA1-221ENST00000493795 RFC4P35249 363 aa8.72□□□□□ -1.01
BRCA1-221ENST00000493795 KLHL7Q8IXQ5 586 aa8.72□□□□□ -1.01
BRCA1-221ENST00000493795 HELBQ8NG08 1087 aaPredicted RBP8.72□□□□□ -1.01
BRCA1-221ENST00000493795 CCDC124Q96CT7 223 aaKnown RBP8.72□□□□□ -1.01
BRCA1-221ENST00000493795 RAB17Q9H0T7 212 aa8.72□□□□□ -1.01
BRCA1-221ENST00000493795 CCDC169A6NNP5 214 aa8.72□□□□□ -1.01
BRCA1-221ENST00000493795 PFDN6O15212 129 aa8.72□□□□□ -1.01
BRCA1-221ENST00000493795 PLCG2P16885 1265 aa8.72□□□□□ -1.01
BRCA1-221ENST00000493795 VPS41P49754 854 aa8.72□□□□□ -1.01
BRCA1-221ENST00000493795 PALM2Q8IXS6 379 aa8.72□□□□□ -1.01
BRCA1-221ENST00000493795 ANKRD42Q8N9B4 389 aa8.72□□□□□ -1.01
BRCA1-221ENST00000493795 MGARPQ8TDB4 240 aa8.72□□□□□ -1.01
BRCA1-221ENST00000493795 ORC6Q9Y5N6 252 aa8.72□□□□□ -1.01
BRCA1-221ENST00000493795 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.72□□□□□ -1.01
BRCA1-221ENST00000493795 LRRD1A4D1F6 860 aa8.72□□□□□ -1.01
BRCA1-221ENST00000493795 CFAP221Q4G0U5 840 aa8.72□□□□□ -1.01
BRCA1-221ENST00000493795 RASEFQ8IZ41 740 aa8.72□□□□□ -1.01
BRCA1-221ENST00000493795 MYCBPQ99417 103 aaPredicted RBP8.72□□□□□ -1.01
BRCA1-221ENST00000493795 PLIN2Q99541 437 aa8.72□□□□□ -1.01
BRCA1-221ENST00000493795 FAM8A1Q9UBU6 413 aa8.72□□□□□ -1.01
BRCA1-221ENST00000493795 CLEC11AQ9Y240 323 aa8.72□□□□□ -1.01
BRCA1-221ENST00000493795 GOLGA8QA0A0J9YX86 632 aa8.72□□□□□ -1.01
BRCA1-221ENST00000493795 GOLGA8OA6NCC3 632 aa8.72□□□□□ -1.01
BRCA1-221ENST00000493795 HNRNPCL2B2RXH8 293 aa8.72□□□□□ -1.01
BRCA1-221ENST00000493795 GOLGA8NF8WBI6 632 aa8.72□□□□□ -1.01
BRCA1-221ENST00000493795 HNRNPCL1O60812 293 aaKnown RBP8.72□□□□□ -1.01
BRCA1-221ENST00000493795 SERPINB6P35237 376 aa8.72□□□□□ -1.01
BRCA1-221ENST00000493795 IL1RL1Q01638 556 aa8.72□□□□□ -1.01
BRCA1-221ENST00000493795 SP4Q02446 784 aa8.72□□□□□ -1.01
BRCA1-221ENST00000493795 GRM1Q13255 1194 aa8.72□□□□□ -1.01
BRCA1-221ENST00000493795 CFAP61Q8NHU2 1237 aa8.72□□□□□ -1.01
BRCA1-221ENST00000493795 KRT12Q99456 494 aa8.72□□□□□ -1.01
BRCA1-221ENST00000493795 NOD1Q9Y239 953 aa8.72□□□□□ -1.01
BRCA1-221ENST00000493795 GOLGA8CPA6NN73 597 aa8.71□□□□□ -1.01
BRCA1-221ENST00000493795 RGS16O15492 202 aaPredicted RBP8.71□□□□□ -1.01
BRCA1-221ENST00000493795 GSTA1P08263 222 aa8.71□□□□□ -1.01
BRCA1-221ENST00000493795 GSTA2P09210 222 aa8.71□□□□□ -1.01
BRCA1-221ENST00000493795 ATL3Q6DD88 541 aa8.71□□□□□ -1.01
BRCA1-221ENST00000493795 NBPF5PQ86XG9 351 aaPredicted RBP8.71□□□□□ -1.01
BRCA1-221ENST00000493795 SCHIP1Q9P0W5 487 aaPredicted RBP8.71□□□□□ -1.01
BRCA1-221ENST00000493795 CAPN7Q9Y6W3 813 aa8.71□□□□□ -1.01
BRCA1-221ENST00000493795 CADPSQ9ULU8 1353 aa8.71□□□□□ -1.01
BRCA1-221ENST00000493795 F8W031 263 aaPredicted RBP8.71□□□□□ -1.01
BRCA1-221ENST00000493795 DKC1O60832 514 aaKnown RBP eCLIP8.71□□□□□ -1.01
BRCA1-221ENST00000493795 PDE4DQ08499 809 aa8.71□□□□□ -1.01
BRCA1-221ENST00000493795 RAD51AP2Q09MP3 1159 aa8.71□□□□□ -1.01
BRCA1-221ENST00000493795 KRT71Q3SY84 523 aa8.71□□□□□ -1.01
BRCA1-221ENST00000493795 ZRANB1Q9UGI0 708 aa8.71□□□□□ -1.01
BRCA1-221ENST00000493795 TTLL3Q9Y4R7 772 aa8.71□□□□□ -1.01
BRCA1-221ENST00000493795 NUB1Q9Y5A7 615 aa8.71□□□□□ -1.01
BRCA1-221ENST00000493795 OAS2P29728 719 aaKnown RBP8.71□□□□□ -1.02
BRCA1-221ENST00000493795 ATP6V1AP38606 617 aa8.71□□□□□ -1.02
BRCA1-221ENST00000493795 BRDTQ58F21 947 aaPredicted RBP8.71□□□□□ -1.02
BRCA1-221ENST00000493795 HAUS3Q68CZ6 603 aa8.71□□□□□ -1.02
BRCA1-221ENST00000493795 UBE3BQ7Z3V4 1068 aa8.71□□□□□ -1.02
BRCA1-221ENST00000493795 RPAINQ86UA6 219 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms