RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 RARSP54136 660 aaKnown RBP21.55■■□□□ 1.04
COL9A1-210ENST00000493682 GPAT2Q6NUI2 795 aa21.55■■□□□ 1.04
COL9A1-210ENST00000493682 ZSCAN29Q8IWY8 852 aaPredicted RBP21.55■■□□□ 1.04
COL9A1-210ENST00000493682 SCYL3Q8IZE3 742 aa21.55■■□□□ 1.04
COL9A1-210ENST00000493682 FAM163AQ96GL9 167 aaPredicted RBP21.55■■□□□ 1.04
COL9A1-210ENST00000493682 PARK7Q99497 189 aaKnown RBP21.55■■□□□ 1.04
COL9A1-210ENST00000493682 MYH2Q9UKX2 1941 aa21.55■■□□□ 1.04
COL9A1-210ENST00000493682 A0A1B0GUL7 405 aa21.54■■□□□ 1.04
COL9A1-210ENST00000493682 SRGAP3O43295 1099 aa21.54■■□□□ 1.04
COL9A1-210ENST00000493682 HOXD10P28358 340 aa21.54■■□□□ 1.04
COL9A1-210ENST00000493682 TFCP2Q12800 502 aa21.54■■□□□ 1.04
COL9A1-210ENST00000493682 SLF2Q8IX21 1173 aa21.54■■□□□ 1.04
COL9A1-210ENST00000493682 XAGE2Q96GT9 111 aa21.54■■□□□ 1.04
COL9A1-210ENST00000493682 PICK1Q9NRD5 415 aa21.54■■□□□ 1.04
COL9A1-210ENST00000493682 ZHX2Q9Y6X8 837 aa21.54■■□□□ 1.04
COL9A1-210ENST00000493682 DOCK2Q92608 1830 aa21.53■■□□□ 1.04
COL9A1-210ENST00000493682 GNAI3P08754 354 aa21.53■■□□□ 1.04
COL9A1-210ENST00000493682 CYP2C8P10632 490 aa21.53■■□□□ 1.04
COL9A1-210ENST00000493682 PTPRAP18433 802 aa21.53■■□□□ 1.04
COL9A1-210ENST00000493682 MAP3K10Q02779 954 aa21.53■■□□□ 1.04
COL9A1-210ENST00000493682 SPTY2D1Q68D10 685 aaPredicted RBP21.53■■□□□ 1.04
COL9A1-210ENST00000493682 RAET1EQ8TD07 263 aa21.53■■□□□ 1.04
COL9A1-210ENST00000493682 ARHGAP45Q92619 1136 aa21.53■■□□□ 1.04
COL9A1-210ENST00000493682 DDX4Q9NQI0 724 aaKnown RBP21.53■■□□□ 1.04
COL9A1-210ENST00000493682 AKAP2Q9Y2D5 859 aa21.53■■□□□ 1.04
COL9A1-210ENST00000493682 A0A0G2JLL6 359 aaPredicted RBP21.52■■□□□ 1.04
COL9A1-210ENST00000493682 DDTLA6NHG4 134 aaPredicted RBP21.52■■□□□ 1.04
COL9A1-210ENST00000493682 SLURP2P0DP57 97 aa21.52■■□□□ 1.04
COL9A1-210ENST00000493682 BCRP11274 1271 aa21.52■■□□□ 1.04
COL9A1-210ENST00000493682 BTDP43251 543 aa21.52■■□□□ 1.04
COL9A1-210ENST00000493682 MTX1Q13505 466 aa21.52■■□□□ 1.04
COL9A1-210ENST00000493682 MVPQ14764 893 aaKnown RBP21.52■■□□□ 1.04
COL9A1-210ENST00000493682 MTFR1Q15390 333 aa21.52■■□□□ 1.04
COL9A1-210ENST00000493682 PRRT2Q7Z6L0 340 aaPredicted RBP21.52■■□□□ 1.04
COL9A1-210ENST00000493682 AFG3L2Q9Y4W6 797 aa21.52■■□□□ 1.04
COL9A1-210ENST00000493682 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.52■■□□□ 1.04
COL9A1-210ENST00000493682 MROH7-TTC4A0A0A0MT08 1334 aa21.52■■□□□ 1.03
COL9A1-210ENST00000493682 GRK4P32298 578 aa21.51■■□□□ 1.03
COL9A1-210ENST00000493682 PICALMQ13492 652 aa21.51■■□□□ 1.03
COL9A1-210ENST00000493682 FASTKD5Q7L8L6 764 aaKnown RBP21.51■■□□□ 1.03
COL9A1-210ENST00000493682 MYPNQ86TC9 1320 aa21.51■■□□□ 1.03
COL9A1-210ENST00000493682 MECOMQ03112 1051 aa21.5■■□□□ 1.03
COL9A1-210ENST00000493682 ERICH6Q7L0X2 663 aa21.5■■□□□ 1.03
COL9A1-210ENST00000493682 ZNF384Q8TF68 577 aa21.5■■□□□ 1.03
COL9A1-210ENST00000493682 GPR75-ASB3A0A0A6YYF3 556 aa21.49■■□□□ 1.03
COL9A1-210ENST00000493682 CTNND1O60716 968 aaKnown RBP21.49■■□□□ 1.03
COL9A1-210ENST00000493682 FCGRTP55899 365 aa21.49■■□□□ 1.03
COL9A1-210ENST00000493682 RHBDL3P58872 404 aa21.49■■□□□ 1.03
COL9A1-210ENST00000493682 PRKCZQ05513 592 aa21.49■■□□□ 1.03
COL9A1-210ENST00000493682 GADL1Q6ZQY3 521 aa21.49■■□□□ 1.03
COL9A1-210ENST00000493682 SHISA4Q96DD7 197 aa21.49■■□□□ 1.03
COL9A1-210ENST00000493682 NEUROD6Q96NK8 337 aa21.49■■□□□ 1.03
COL9A1-210ENST00000493682 HMG20BQ9P0W2 317 aa21.48■■□□□ 1.03
COL9A1-210ENST00000493682 SLC45A1Q9Y2W3 748 aa21.48■■□□□ 1.03
COL9A1-210ENST00000493682 H0YGN5 161 aa21.47■■□□□ 1.03
COL9A1-210ENST00000493682 PI16Q6UXB8 463 aa21.47■■□□□ 1.03
COL9A1-210ENST00000493682 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.47■■□□□ 1.03
COL9A1-210ENST00000493682 GABRQQ9UN88 632 aa21.47■■□□□ 1.03
COL9A1-210ENST00000493682 COLQQ9Y215 455 aaPredicted RBP21.47■■□□□ 1.03
COL9A1-210ENST00000493682 DOCK1Q14185 1865 aa21.46■■□□□ 1.03
COL9A1-210ENST00000493682 TRIM75PA6NK02 468 aa21.46■■□□□ 1.03
COL9A1-210ENST00000493682 CCL5P13501 91 aa21.46■■□□□ 1.03
COL9A1-210ENST00000493682 TBC1D9Q6ZT07 1266 aa21.46■■□□□ 1.03
COL9A1-210ENST00000493682 SPATA5Q8NB90 893 aa21.46■■□□□ 1.03
COL9A1-210ENST00000493682 NKX2-3Q8TAU0 364 aa21.46■■□□□ 1.03
COL9A1-210ENST00000493682 BIN2Q9UBW5 565 aaPredicted RBP21.46■■□□□ 1.03
COL9A1-210ENST00000493682 IPO8O15397 1037 aaKnown RBP21.45■■□□□ 1.02
COL9A1-210ENST00000493682 TBC1D12O60347 775 aa21.45■■□□□ 1.02
COL9A1-210ENST00000493682 GJB1P08034 283 aa21.45■■□□□ 1.02
COL9A1-210ENST00000493682 TRIM27P14373 513 aa21.45■■□□□ 1.02
COL9A1-210ENST00000493682 GJA8P48165 433 aa21.45■■□□□ 1.02
COL9A1-210ENST00000493682 FXR1P51114 621 aaKnown RBP eCLIP21.45■■□□□ 1.02
COL9A1-210ENST00000493682 GSTO1P78417 241 aa21.45■■□□□ 1.02
COL9A1-210ENST00000493682 GORABQ5T7V8 394 aa21.45■■□□□ 1.02
COL9A1-210ENST00000493682 CCDC84Q86UT8 332 aaPredicted RBP21.45■■□□□ 1.02
COL9A1-210ENST00000493682 NSUN4Q96CB9 384 aaKnown RBP21.45■■□□□ 1.02
COL9A1-210ENST00000493682 RNF208Q9H0X6 261 aa21.45■■□□□ 1.02
COL9A1-210ENST00000493682 TNNQ9UQP3 1299 aa21.45■■□□□ 1.02
COL9A1-210ENST00000493682 PHIPQ8WWQ0 1821 aa21.44■■□□□ 1.02
COL9A1-210ENST00000493682 FAM196BA6NMK8 535 aa21.44■■□□□ 1.02
COL9A1-210ENST00000493682 CCER2I3L3R5 266 aa21.44■■□□□ 1.02
COL9A1-210ENST00000493682 GNAI2P04899 355 aa21.44■■□□□ 1.02
COL9A1-210ENST00000493682 LDHCP07864 332 aa21.44■■□□□ 1.02
COL9A1-210ENST00000493682 UBXN2AP68543 259 aa21.44■■□□□ 1.02
COL9A1-210ENST00000493682 SLAIN1Q8ND83 568 aa21.44■■□□□ 1.02
COL9A1-210ENST00000493682 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.44■■□□□ 1.02
COL9A1-210ENST00000493682 MGAMO43451 1857 aa21.43■■□□□ 1.02
COL9A1-210ENST00000493682 PTPRFP10586 1907 aa21.43■■□□□ 1.02
COL9A1-210ENST00000493682 PNMA6EA0A0J9YXQ4 647 aa21.43■■□□□ 1.02
COL9A1-210ENST00000493682 MAP4K4O95819 1239 aaPredicted RBP21.43■■□□□ 1.02
COL9A1-210ENST00000493682 ARID4AP29374 1257 aaPredicted RBP21.43■■□□□ 1.02
COL9A1-210ENST00000493682 UBE2Q1Q7Z7E8 422 aa21.43■■□□□ 1.02
COL9A1-210ENST00000493682 SMCR8Q8TEV9 937 aaPredicted RBP21.43■■□□□ 1.02
COL9A1-210ENST00000493682 RAI14Q9P0K7 980 aa21.43■■□□□ 1.02
COL9A1-210ENST00000493682 AGTPBP1Q9UPW5 1226 aa21.43■■□□□ 1.02
COL9A1-210ENST00000493682 ADCY3O60266 1144 aa21.42■■□□□ 1.02
COL9A1-210ENST00000493682 BCAR3O75815 825 aa21.42■■□□□ 1.02
COL9A1-210ENST00000493682 FLT3LGP49771 235 aa21.42■■□□□ 1.02
COL9A1-210ENST00000493682 G3BP1Q13283 466 aaKnown RBP eCLIP21.42■■□□□ 1.02
COL9A1-210ENST00000493682 ATF7IPQ6VMQ6 1270 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms