RNA–Protein interactions for RNA: ENST00000493647.1

RHBDF1-211, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-211ENST00000493647 ECM29Q5VYK3 1845 aa14.57□□□□□ -0.08
RHBDF1-211ENST00000493647 HIP1O00291 1037 aa14.56□□□□□ -0.08
RHBDF1-211ENST00000493647 ENTPD3O75355 529 aa14.56□□□□□ -0.08
RHBDF1-211ENST00000493647 NPM3O75607 178 aaKnown RBP14.56□□□□□ -0.08
RHBDF1-211ENST00000493647 MCMDC2Q4G0Z9 681 aa14.56□□□□□ -0.08
RHBDF1-211ENST00000493647 CERS3Q8IU89 383 aa14.56□□□□□ -0.08
RHBDF1-211ENST00000493647 FAM151AQ8WW52 585 aa14.56□□□□□ -0.08
RHBDF1-211ENST00000493647 CDCA5Q96FF9 252 aa14.56□□□□□ -0.08
RHBDF1-211ENST00000493647 OSBPL5Q9H0X9 879 aaPredicted RBP14.56□□□□□ -0.08
RHBDF1-211ENST00000493647 EPB41L4AQ9HCS5 686 aaPredicted RBP14.56□□□□□ -0.08
RHBDF1-211ENST00000493647 PASKQ96RG2 1323 aa14.56□□□□□ -0.08
RHBDF1-211ENST00000493647 SSC5DA1L4H1 1573 aa14.56□□□□□ -0.08
RHBDF1-211ENST00000493647 DDTLA6NHG4 134 aaPredicted RBP14.55□□□□□ -0.08
RHBDF1-211ENST00000493647 GSG1L2A8MUP6 293 aa14.55□□□□□ -0.08
RHBDF1-211ENST00000493647 TNFAIP1Q13829 316 aa14.55□□□□□ -0.08
RHBDF1-211ENST00000493647 NBPF12Q5TAG4 269 aaPredicted RBP14.55□□□□□ -0.08
RHBDF1-211ENST00000493647 VPS53Q5VIR6 699 aa14.55□□□□□ -0.08
RHBDF1-211ENST00000493647 DCP1AQ9NPI6 582 aaPredicted RBP14.55□□□□□ -0.08
RHBDF1-211ENST00000493647 SAP30BPQ9UHR5 308 aaKnown RBP14.55□□□□□ -0.08
RHBDF1-211ENST00000493647 PPP2R3BQ9Y5P8 575 aa14.55□□□□□ -0.08
RHBDF1-211ENST00000493647 SLC4A4Q9Y6R1 1079 aa14.55□□□□□ -0.08
RHBDF1-211ENST00000493647 CDC45O75419 566 aa14.54□□□□□ -0.08
RHBDF1-211ENST00000493647 SLURP2P0DP57 97 aa14.54□□□□□ -0.08
RHBDF1-211ENST00000493647 USP5P45974 858 aa14.54□□□□□ -0.08
RHBDF1-211ENST00000493647 TNNI2P48788 182 aa14.54□□□□□ -0.08
RHBDF1-211ENST00000493647 EVX2Q03828 476 aa14.54□□□□□ -0.08
RHBDF1-211ENST00000493647 FSTL1Q12841 308 aa14.54□□□□□ -0.08
RHBDF1-211ENST00000493647 CCDC171Q6TFL3 1326 aa14.54□□□□□ -0.08
RHBDF1-211ENST00000493647 ATRNL1Q5VV63 1379 aa14.54□□□□□ -0.08
RHBDF1-211ENST00000493647 RPAP1Q9BWH6 1393 aaPredicted RBP14.54□□□□□ -0.08
RHBDF1-211ENST00000493647 POLR2AP24928 1970 aaKnown RBP14.53□□□□□ -0.08
RHBDF1-211ENST00000493647 AK9Q5TCS8 1911 aa14.53□□□□□ -0.08
RHBDF1-211ENST00000493647 COL2A1P02458 1487 aaPredicted RBP14.53□□□□□ -0.08
RHBDF1-211ENST00000493647 SMIM22K7EJ46 135 aa14.53□□□□□ -0.08
RHBDF1-211ENST00000493647 SGSM2O43147 1006 aa14.53□□□□□ -0.08
RHBDF1-211ENST00000493647 CYP2D6P10635 497 aa14.53□□□□□ -0.08
RHBDF1-211ENST00000493647 PALD1Q9ULE6 856 aa14.53□□□□□ -0.08
RHBDF1-211ENST00000493647 FZD1Q9UP38 647 aa14.53□□□□□ -0.08
RHBDF1-211ENST00000493647 RAD50Q92878 1312 aa14.52□□□□□ -0.08
RHBDF1-211ENST00000493647 CYP2D7A0A087X1C5 515 aa14.52□□□□□ -0.09
RHBDF1-211ENST00000493647 PATL2C9JE40 543 aaKnown RBP14.52□□□□□ -0.09
RHBDF1-211ENST00000493647 GNAT2P19087 354 aa14.52□□□□□ -0.09
RHBDF1-211ENST00000493647 SLC4A8Q2Y0W8 1093 aa14.52□□□□□ -0.09
RHBDF1-211ENST00000493647 CST9Q5W186 159 aa14.52□□□□□ -0.09
RHBDF1-211ENST00000493647 ESYT1Q9BSJ8 1104 aa14.52□□□□□ -0.09
RHBDF1-211ENST00000493647 ATP8A2Q9NTI2 1148 aa14.52□□□□□ -0.09
RHBDF1-211ENST00000493647 CDK5RAP2Q96SN8 1893 aa14.52□□□□□ -0.09
RHBDF1-211ENST00000493647 DDX60LQ5H9U9 1706 aaKnown RBP14.52□□□□□ -0.09
RHBDF1-211ENST00000493647 CELF2O95319 508 aaKnown RBP14.51□□□□□ -0.09
RHBDF1-211ENST00000493647 HSPD1P10809 573 aaKnown RBP14.51□□□□□ -0.09
RHBDF1-211ENST00000493647 CTR9Q6PD62 1173 aa14.51□□□□□ -0.09
RHBDF1-211ENST00000493647 IFNL3Q8IZI9 196 aa14.51□□□□□ -0.09
RHBDF1-211ENST00000493647 ZNF408Q9H9D4 720 aa14.51□□□□□ -0.09
RHBDF1-211ENST00000493647 MCM9Q9NXL9 1143 aa14.51□□□□□ -0.09
RHBDF1-211ENST00000493647 FOCADQ5VW36 1801 aa14.5□□□□□ -0.09
RHBDF1-211ENST00000493647 USP17L12C9JPN9 530 aa14.5□□□□□ -0.09
RHBDF1-211ENST00000493647 USP17L21D6R901 530 aa14.5□□□□□ -0.09
RHBDF1-211ENST00000493647 PLCD1P51178 756 aa14.5□□□□□ -0.09
RHBDF1-211ENST00000493647 PTH1RQ03431 593 aa14.5□□□□□ -0.09
RHBDF1-211ENST00000493647 GIMAP6Q6P9H5 292 aa14.5□□□□□ -0.09
RHBDF1-211ENST00000493647 MOB2Q70IA6 237 aa14.5□□□□□ -0.09
RHBDF1-211ENST00000493647 ZSCAN29Q8IWY8 852 aaPredicted RBP14.5□□□□□ -0.09
RHBDF1-211ENST00000493647 RUFY2Q8WXA3 655 aa14.5□□□□□ -0.09
RHBDF1-211ENST00000493647 CSRNP1Q96S65 589 aa14.5□□□□□ -0.09
RHBDF1-211ENST00000493647 FAM196BA6NMK8 535 aa14.49□□□□□ -0.09
RHBDF1-211ENST00000493647 APPP05067 770 aa14.49□□□□□ -0.09
RHBDF1-211ENST00000493647 MAP3K10Q02779 954 aa14.49□□□□□ -0.09
RHBDF1-211ENST00000493647 PRKG1Q13976 671 aa14.49□□□□□ -0.09
RHBDF1-211ENST00000493647 ALX1Q15699 326 aa14.49□□□□□ -0.09
RHBDF1-211ENST00000493647 SUPT20HL1Q3ZLR7 823 aa14.49□□□□□ -0.09
RHBDF1-211ENST00000493647 MIGA2Q7L4E1 593 aa14.49□□□□□ -0.09
RHBDF1-211ENST00000493647 DHX36Q9H2U1 1008 aaKnown RBP14.49□□□□□ -0.09
RHBDF1-211ENST00000493647 DNAJC18Q9H819 358 aa14.49□□□□□ -0.09
RHBDF1-211ENST00000493647 NAV1Q8NEY1 1877 aa14.48□□□□□ -0.09
RHBDF1-211ENST00000493647 SIPA1L1O43166 1804 aa14.48□□□□□ -0.09
RHBDF1-211ENST00000493647 USP2O75604 605 aaPredicted RBP14.48□□□□□ -0.09
RHBDF1-211ENST00000493647 FGAP02671 866 aa14.48□□□□□ -0.09
RHBDF1-211ENST00000493647 POLR3DP05423 398 aaPredicted RBP14.48□□□□□ -0.09
RHBDF1-211ENST00000493647 TDO2P48775 406 aa14.48□□□□□ -0.09
RHBDF1-211ENST00000493647 MFAP1P55081 439 aaKnown RBP14.48□□□□□ -0.09
RHBDF1-211ENST00000493647 SBK1Q52WX2 424 aa14.48□□□□□ -0.09
RHBDF1-211ENST00000493647 C12orf60Q5U649 245 aa14.48□□□□□ -0.09
RHBDF1-211ENST00000493647 METTL16Q86W50 562 aaKnown RBP14.48□□□□□ -0.09
RHBDF1-211ENST00000493647 DYNLL2Q96FJ2 89 aa14.48□□□□□ -0.09
RHBDF1-211ENST00000493647 DSCC1Q9BVC3 393 aa14.48□□□□□ -0.09
RHBDF1-211ENST00000493647 LSG1Q9H089 658 aaKnown RBP14.48□□□□□ -0.09
RHBDF1-211ENST00000493647 GBA2Q9HCG7 927 aaPredicted RBP14.48□□□□□ -0.09
RHBDF1-211ENST00000493647 GABPAQ06546 454 aa14.47□□□□□ -0.09
RHBDF1-211ENST00000493647 RRP1BQ14684 758 aaKnown RBP14.47□□□□□ -0.09
RHBDF1-211ENST00000493647 TTC6Q86TZ1 520 aa14.47□□□□□ -0.09
RHBDF1-211ENST00000493647 NACAP1Q9BZK3 213 aa14.47□□□□□ -0.09
RHBDF1-211ENST00000493647 NAPBQ9H115 298 aa14.47□□□□□ -0.09
RHBDF1-211ENST00000493647 EHD4Q9H223 541 aa14.47□□□□□ -0.09
RHBDF1-211ENST00000493647 PI4KBQ9UBF8 816 aa14.47□□□□□ -0.09
RHBDF1-211ENST00000493647 ARPP21Q9UBL0 812 aaPredicted RBP14.47□□□□□ -0.09
RHBDF1-211ENST00000493647 TACC3Q9Y6A5 838 aa14.47□□□□□ -0.09
RHBDF1-211ENST00000493647 ZMYM6O95789 1325 aa14.46□□□□□ -0.09
RHBDF1-211ENST00000493647 PHF20L1A8MW92 1017 aa14.46□□□□□ -0.09
RHBDF1-211ENST00000493647 UBE2Q2LH0YL09 131 aa14.46□□□□□ -0.09
RHBDF1-211ENST00000493647 TBC1D12O60347 775 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms