RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 STK32AQ8WU08 396 aa7.28□□□□□ -1.24
CLIP4-212ENST00000493551 GGNBP2Q9H3C7 697 aa7.28□□□□□ -1.24
CLIP4-212ENST00000493551 ZFYVE1Q9HBF4 777 aa7.28□□□□□ -1.24
CLIP4-212ENST00000493551 ADAMTS6Q9UKP5 1117 aa7.28□□□□□ -1.24
CLIP4-212ENST00000493551 AP4E1Q9UPM8 1137 aa7.28□□□□□ -1.24
CLIP4-212ENST00000493551 NEO1Q92859 1461 aa7.28□□□□□ -1.24
CLIP4-212ENST00000493551 ZFYVE16Q7Z3T8 1539 aa7.27□□□□□ -1.25
CLIP4-212ENST00000493551 CYP11A1P05108 521 aa7.27□□□□□ -1.25
CLIP4-212ENST00000493551 MAOBP27338 520 aa7.27□□□□□ -1.25
CLIP4-212ENST00000493551 DNM1Q05193 864 aaKnown RBP7.27□□□□□ -1.25
CLIP4-212ENST00000493551 C8orf34Q49A92 452 aa7.27□□□□□ -1.25
CLIP4-212ENST00000493551 AKAP4Q5JQC9 854 aa7.27□□□□□ -1.25
CLIP4-212ENST00000493551 FAM9AQ8IZU1 332 aaPredicted RBP7.27□□□□□ -1.25
CLIP4-212ENST00000493551 LRRN4CLQ8ND94 238 aa7.27□□□□□ -1.25
CLIP4-212ENST00000493551 PI4K2BQ8TCG2 481 aa7.27□□□□□ -1.25
CLIP4-212ENST00000493551 GSX1Q9H4S2 264 aaPredicted RBP7.27□□□□□ -1.25
CLIP4-212ENST00000493551 FANCAO15360 1455 aa7.27□□□□□ -1.25
CLIP4-212ENST00000493551 FER1L4A9Z1Z3 1794 aa7.27□□□□□ -1.25
CLIP4-212ENST00000493551 RAPGEF6Q8TEU7 1601 aa7.27□□□□□ -1.25
CLIP4-212ENST00000493551 FHOD3Q2V2M9 1422 aa7.27□□□□□ -1.25
CLIP4-212ENST00000493551 AKNAQ7Z591 1439 aa7.27□□□□□ -1.25
CLIP4-212ENST00000493551 A6NHS1 94 aa7.26□□□□□ -1.25
CLIP4-212ENST00000493551 EREGO14944 169 aa7.26□□□□□ -1.25
CLIP4-212ENST00000493551 DYNC1LI2O43237 492 aaPredicted RBP7.26□□□□□ -1.25
CLIP4-212ENST00000493551 PDGFAP04085 211 aa7.26□□□□□ -1.25
CLIP4-212ENST00000493551 ASPAP45381 313 aa7.26□□□□□ -1.25
CLIP4-212ENST00000493551 CILP2Q8IUL8 1156 aa7.26□□□□□ -1.25
CLIP4-212ENST00000493551 PLD6Q8N2A8 252 aaKnown RBP7.26□□□□□ -1.25
CLIP4-212ENST00000493551 RAD18Q9NS91 495 aa7.26□□□□□ -1.25
CLIP4-212ENST00000493551 VAV3Q9UKW4 847 aa7.26□□□□□ -1.25
CLIP4-212ENST00000493551 DAGLAQ9Y4D2 1042 aa7.26□□□□□ -1.25
CLIP4-212ENST00000493551 RICTORQ6R327 1708 aa7.26□□□□□ -1.25
CLIP4-212ENST00000493551 POGZQ7Z3K3 1410 aa7.26□□□□□ -1.25
CLIP4-212ENST00000493551 TTC37Q6PGP7 1564 aa7.25□□□□□ -1.25
CLIP4-212ENST00000493551 NUP153P49790 1475 aaKnown RBP7.25□□□□□ -1.25
CLIP4-212ENST00000493551 LRRC10BA6NIK2 292 aa7.25□□□□□ -1.25
CLIP4-212ENST00000493551 POU4F3Q15319 338 aa7.25□□□□□ -1.25
CLIP4-212ENST00000493551 LILRA6Q6PI73 481 aa7.25□□□□□ -1.25
CLIP4-212ENST00000493551 ZSCAN18Q8TBC5 510 aaPredicted RBP7.25□□□□□ -1.25
CLIP4-212ENST00000493551 FAM53CQ9NYF3 392 aa7.25□□□□□ -1.25
CLIP4-212ENST00000493551 NCANO14594 1321 aa7.25□□□□□ -1.25
CLIP4-212ENST00000493551 PHLDB1Q86UU1 1377 aa7.24□□□□□ -1.25
CLIP4-212ENST00000493551 PHACTR2O75167 634 aa7.24□□□□□ -1.25
CLIP4-212ENST00000493551 CTSBP07858 339 aa7.24□□□□□ -1.25
CLIP4-212ENST00000493551 MZF1P28698 734 aaPredicted RBP7.24□□□□□ -1.25
CLIP4-212ENST00000493551 RAP1GAPP47736 663 aa7.24□□□□□ -1.25
CLIP4-212ENST00000493551 PRKCQQ04759 706 aa7.24□□□□□ -1.25
CLIP4-212ENST00000493551 SNX29Q8TEQ0 813 aa7.24□□□□□ -1.25
CLIP4-212ENST00000493551 PRXQ9BXM0 1461 aa7.24□□□□□ -1.25
CLIP4-212ENST00000493551 HECW1Q76N89 1606 aa7.23□□□□□ -1.25
CLIP4-212ENST00000493551 EFCAB5A4FU69 1503 aa7.23□□□□□ -1.25
CLIP4-212ENST00000493551 PLEKHD1A6NEE1 506 aa7.23□□□□□ -1.25
CLIP4-212ENST00000493551 FLAD1Q8NFF5 587 aa7.23□□□□□ -1.25
CLIP4-212ENST00000493551 CLP1Q92989 425 aaKnown RBP7.23□□□□□ -1.25
CLIP4-212ENST00000493551 CLEC4MQ9H2X3 399 aaPredicted RBP7.23□□□□□ -1.25
CLIP4-212ENST00000493551 CDK13Q14004 1512 aaKnown RBP7.22□□□□□ -1.25
CLIP4-212ENST00000493551 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.22□□□□□ -1.25
CLIP4-212ENST00000493551 SCAPERQ9BY12 1400 aa7.22□□□□□ -1.25
CLIP4-212ENST00000493551 METTL12A8MUP2 240 aa7.22□□□□□ -1.25
CLIP4-212ENST00000493551 PRRG2O14669 202 aa7.22□□□□□ -1.25
CLIP4-212ENST00000493551 TNFRSF21O75509 655 aa7.22□□□□□ -1.25
CLIP4-212ENST00000493551 TSPAN15O95858 294 aa7.22□□□□□ -1.25
CLIP4-212ENST00000493551 CFPP27918 469 aa7.22□□□□□ -1.25
CLIP4-212ENST00000493551 PCDH1Q08174 1060 aa7.22□□□□□ -1.25
CLIP4-212ENST00000493551 NOM1Q5C9Z4 860 aaKnown RBP7.22□□□□□ -1.25
CLIP4-212ENST00000493551 PEAR1Q5VY43 1037 aaPredicted RBP7.22□□□□□ -1.25
CLIP4-212ENST00000493551 ZSWIM9Q86XI8 627 aa7.22□□□□□ -1.25
CLIP4-212ENST00000493551 FAM181AQ8N9Y4 354 aa7.22□□□□□ -1.25
CLIP4-212ENST00000493551 PPP1R16BQ96T49 567 aa7.22□□□□□ -1.25
CLIP4-212ENST00000493551 CORO1BQ9BR76 489 aa7.22□□□□□ -1.25
CLIP4-212ENST00000493551 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.22□□□□□ -1.25
CLIP4-212ENST00000493551 STRCQ7RTU9 1775 aa7.22□□□□□ -1.25
CLIP4-212ENST00000493551 PREX1Q8TCU6 1659 aa7.22□□□□□ -1.25
CLIP4-212ENST00000493551 UHRF1BP1Q6BDS2 1440 aa7.21□□□□□ -1.25
CLIP4-212ENST00000493551 FAM87AP0C7U9 286 aa7.21□□□□□ -1.26
CLIP4-212ENST00000493551 IFI16Q16666 785 aaKnown RBP7.21□□□□□ -1.26
CLIP4-212ENST00000493551 HELQQ8TDG4 1101 aa7.21□□□□□ -1.26
CLIP4-212ENST00000493551 HRASLS5Q96KN8 279 aa7.21□□□□□ -1.26
CLIP4-212ENST00000493551 MKNK2Q9HBH9 465 aa7.21□□□□□ -1.26
CLIP4-212ENST00000493551 LGR6Q9HBX8 967 aa7.21□□□□□ -1.26
CLIP4-212ENST00000493551 SEPT3Q9UH03 358 aa7.21□□□□□ -1.26
CLIP4-212ENST00000493551 SAMD9Q5K651 1589 aa7.2□□□□□ -1.26
CLIP4-212ENST00000493551 B8ZZF3 427 aa7.2□□□□□ -1.26
CLIP4-212ENST00000493551 CD96P40200 585 aa7.2□□□□□ -1.26
CLIP4-212ENST00000493551 MLANAQ16655 118 aa7.2□□□□□ -1.26
CLIP4-212ENST00000493551 AOC3Q16853 763 aa7.2□□□□□ -1.26
CLIP4-212ENST00000493551 TMEM164Q5U3C3 297 aa7.2□□□□□ -1.26
CLIP4-212ENST00000493551 ANGEL2Q5VTE6 544 aaKnown RBP7.2□□□□□ -1.26
CLIP4-212ENST00000493551 SLC23A3Q6PIS1 610 aa7.2□□□□□ -1.26
CLIP4-212ENST00000493551 C1QL4Q86Z23 238 aa7.2□□□□□ -1.26
CLIP4-212ENST00000493551 SIAH1Q8IUQ4 282 aa7.2□□□□□ -1.26
CLIP4-212ENST00000493551 LRRC56Q8IYG6 542 aaPredicted RBP7.2□□□□□ -1.26
CLIP4-212ENST00000493551 DDX54Q8TDD1 881 aaKnown RBP7.2□□□□□ -1.26
CLIP4-212ENST00000493551 LATS2Q9NRM7 1088 aa7.2□□□□□ -1.26
CLIP4-212ENST00000493551 AMOTL2Q9Y2J4 779 aa7.2□□□□□ -1.26
CLIP4-212ENST00000493551 ZMYM4Q5VZL5 1548 aa7.2□□□□□ -1.26
CLIP4-212ENST00000493551 SYNGAP1Q96PV0 1343 aa7.2□□□□□ -1.26
CLIP4-212ENST00000493551 CFAP74Q9C0B2 1584 aa7.2□□□□□ -1.26
CLIP4-212ENST00000493551 ARHGEF12Q9NZN5 1544 aa7.19□□□□□ -1.26
CLIP4-212ENST00000493551 A0A096LPE4 126 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms