RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 PANK1Q8TE04 598 aa16.6■□□□□ 0.25
IRF1-210ENST00000493208 ZKSCAN4Q969J2 545 aaPredicted RBP16.6■□□□□ 0.25
IRF1-210ENST00000493208 NSUN4Q96CB9 384 aaKnown RBP16.6■□□□□ 0.25
IRF1-210ENST00000493208 TBC1D2Q9BYX2 928 aa16.6■□□□□ 0.25
IRF1-210ENST00000493208 DHX36Q9H2U1 1008 aaKnown RBP16.6■□□□□ 0.25
IRF1-210ENST00000493208 FAM198AQ9UFP1 575 aa16.6■□□□□ 0.25
IRF1-210ENST00000493208 SNCAIPQ9Y6H5 919 aa16.6■□□□□ 0.25
IRF1-210ENST00000493208 MAP3K12Q12852 859 aa16.59■□□□□ 0.25
IRF1-210ENST00000493208 CRHR2Q13324 411 aa16.59■□□□□ 0.25
IRF1-210ENST00000493208 PDE3AQ14432 1141 aa16.59■□□□□ 0.25
IRF1-210ENST00000493208 TTF1Q15361 905 aaPredicted RBP16.59■□□□□ 0.25
IRF1-210ENST00000493208 FASTKD5Q7L8L6 764 aaKnown RBP16.59■□□□□ 0.25
IRF1-210ENST00000493208 CDAN1Q8IWY9 1227 aa16.59■□□□□ 0.25
IRF1-210ENST00000493208 KIF1BPQ96EK5 621 aa16.59■□□□□ 0.25
IRF1-210ENST00000493208 MS4A4AQ96JQ5 239 aa16.59■□□□□ 0.25
IRF1-210ENST00000493208 ZNF112Q9UJU3 913 aa16.59■□□□□ 0.25
IRF1-210ENST00000493208 CXCL11O14625 94 aa16.58■□□□□ 0.24
IRF1-210ENST00000493208 IRF6O14896 467 aa16.58■□□□□ 0.24
IRF1-210ENST00000493208 CTNND1O60716 968 aaKnown RBP16.58■□□□□ 0.24
IRF1-210ENST00000493208 RAB11FIP3O75154 756 aa16.58■□□□□ 0.24
IRF1-210ENST00000493208 GNRH1P01148 92 aa16.58■□□□□ 0.24
IRF1-210ENST00000493208 TEX11Q8IYF3 940 aa16.58■□□□□ 0.24
IRF1-210ENST00000493208 SCYL3Q8IZE3 742 aa16.58■□□□□ 0.24
IRF1-210ENST00000493208 DBNDD2Q9BQY9 259 aa16.58■□□□□ 0.24
IRF1-210ENST00000493208 TRIM17Q9Y577 477 aa16.58■□□□□ 0.24
IRF1-210ENST00000493208 TBC1D12O60347 775 aa16.57■□□□□ 0.24
IRF1-210ENST00000493208 IFIT2P09913 472 aaKnown RBP16.57■□□□□ 0.24
IRF1-210ENST00000493208 GJA5P36382 358 aa16.57■□□□□ 0.24
IRF1-210ENST00000493208 AACSQ86V21 672 aa16.57■□□□□ 0.24
IRF1-210ENST00000493208 BRI3BPQ8WY22 251 aa16.57■□□□□ 0.24
IRF1-210ENST00000493208 EFCC1Q9HA90 598 aa16.57■□□□□ 0.24
IRF1-210ENST00000493208 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.57■□□□□ 0.24
IRF1-210ENST00000493208 HERC5Q9UII4 1024 aaKnown RBP16.57■□□□□ 0.24
IRF1-210ENST00000493208 HPS5Q9UPZ3 1129 aa16.57■□□□□ 0.24
IRF1-210ENST00000493208 COL2A1P02458 1487 aaPredicted RBP16.56■□□□□ 0.24
IRF1-210ENST00000493208 ATRNL1Q5VV63 1379 aa16.56■□□□□ 0.24
IRF1-210ENST00000493208 TBC1D9Q6ZT07 1266 aa16.56■□□□□ 0.24
IRF1-210ENST00000493208 ANKRD23Q86SG2 305 aa16.56■□□□□ 0.24
IRF1-210ENST00000493208 PARK7Q99497 189 aaKnown RBP16.56■□□□□ 0.24
IRF1-210ENST00000493208 PI4KBQ9UBF8 816 aa16.56■□□□□ 0.24
IRF1-210ENST00000493208 COG6Q9Y2V7 657 aa16.56■□□□□ 0.24
IRF1-210ENST00000493208 TLR2O60603 784 aa16.55■□□□□ 0.24
IRF1-210ENST00000493208 IDH1O75874 414 aaKnown RBP16.55■□□□□ 0.24
IRF1-210ENST00000493208 HLA-DOAP06340 250 aa16.55■□□□□ 0.24
IRF1-210ENST00000493208 HOXD10P28358 340 aa16.55■□□□□ 0.24
IRF1-210ENST00000493208 INPP5BP32019 993 aa16.55■□□□□ 0.24
IRF1-210ENST00000493208 RGS19P49795 217 aa16.55■□□□□ 0.24
IRF1-210ENST00000493208 NBPF11Q86T75 865 aa16.55■□□□□ 0.24
IRF1-210ENST00000493208 PTPN18Q99952 460 aa16.55■□□□□ 0.24
IRF1-210ENST00000493208 CCDC8Q9H0W5 538 aaPredicted RBP16.55■□□□□ 0.24
IRF1-210ENST00000493208 OSBPL5Q9H0X9 879 aaPredicted RBP16.55■□□□□ 0.24
IRF1-210ENST00000493208 AS3MTQ9HBK9 375 aa16.55■□□□□ 0.24
IRF1-210ENST00000493208 SNRKQ9NRH2 765 aa16.55■□□□□ 0.24
IRF1-210ENST00000493208 DBNLQ9UJU6 430 aaKnown RBP16.55■□□□□ 0.24
IRF1-210ENST00000493208 KCNH4Q9UQ05 1017 aa16.55■□□□□ 0.24
IRF1-210ENST00000493208 EXOC6BQ9Y2D4 811 aa16.55■□□□□ 0.24
IRF1-210ENST00000493208 MYH2Q9UKX2 1941 aa16.55■□□□□ 0.24
IRF1-210ENST00000493208 LAMB1P07942 1786 aa16.54■□□□□ 0.24
IRF1-210ENST00000493208 PRMT2P55345 433 aa16.54■□□□□ 0.24
IRF1-210ENST00000493208 RHBDL3P58872 404 aa16.54■□□□□ 0.24
IRF1-210ENST00000493208 PPP4CP60510 307 aa16.54■□□□□ 0.24
IRF1-210ENST00000493208 PABPC4Q13310 644 aaKnown RBP eCLIP16.54■□□□□ 0.24
IRF1-210ENST00000493208 PI16Q6UXB8 463 aa16.54■□□□□ 0.24
IRF1-210ENST00000493208 CRACR2BQ8N4Y2 399 aaPredicted RBP16.54■□□□□ 0.24
IRF1-210ENST00000493208 RHPN1Q8TCX5 695 aa16.54■□□□□ 0.24
IRF1-210ENST00000493208 CNKSR2Q8WXI2 1034 aa16.54■□□□□ 0.24
IRF1-210ENST00000493208 GINM1Q9NU53 330 aa16.54■□□□□ 0.24
IRF1-210ENST00000493208 ZBTB40Q9NUA8 1239 aa16.54■□□□□ 0.24
IRF1-210ENST00000493208 AATFQ9NY61 560 aaKnown RBP eCLIP16.54■□□□□ 0.24
IRF1-210ENST00000493208 AK9Q5TCS8 1911 aa16.54■□□□□ 0.24
IRF1-210ENST00000493208 RFX7Q2KHR2 1363 aa16.53■□□□□ 0.24
IRF1-210ENST00000493208 OTOFQ9HC10 1997 aa16.53■□□□□ 0.24
IRF1-210ENST00000493208 ZAP70P43403 619 aa16.53■□□□□ 0.24
IRF1-210ENST00000493208 MAP3K10Q02779 954 aa16.53■□□□□ 0.24
IRF1-210ENST00000493208 OTOP1Q7RTM1 612 aa16.53■□□□□ 0.24
IRF1-210ENST00000493208 FAM43AQ8N2R8 423 aa16.53■□□□□ 0.24
IRF1-210ENST00000493208 EAF2Q96CJ1 260 aaPredicted RBP16.53■□□□□ 0.24
IRF1-210ENST00000493208 PNMA3Q9UL41 463 aa16.53■□□□□ 0.24
IRF1-210ENST00000493208 ZHX2Q9Y6X8 837 aa16.53■□□□□ 0.24
IRF1-210ENST00000493208 BTBD19C9JJ37 291 aa16.52■□□□□ 0.24
IRF1-210ENST00000493208 PDHXO00330 501 aa16.52■□□□□ 0.24
IRF1-210ENST00000493208 CYP2E1P05181 493 aaPredicted RBP16.52■□□□□ 0.24
IRF1-210ENST00000493208 CYP7A1P22680 504 aa16.52■□□□□ 0.24
IRF1-210ENST00000493208 USP5P45974 858 aa16.52■□□□□ 0.24
IRF1-210ENST00000493208 FOXP4Q8IVH2 680 aaPredicted RBP16.52■□□□□ 0.24
IRF1-210ENST00000493208 CD99L2Q8TCZ2 262 aa16.52■□□□□ 0.24
IRF1-210ENST00000493208 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.52■□□□□ 0.24
IRF1-210ENST00000493208 GPATCH3Q96I76 525 aa16.52■□□□□ 0.24
IRF1-210ENST00000493208 SLC45A1Q9Y2W3 748 aa16.52■□□□□ 0.24
IRF1-210ENST00000493208 DDTLA6NHG4 134 aaPredicted RBP16.51■□□□□ 0.23
IRF1-210ENST00000493208 PTPRAP18433 802 aa16.51■□□□□ 0.23
IRF1-210ENST00000493208 ZFPM1Q8IX07 1006 aa16.51■□□□□ 0.23
IRF1-210ENST00000493208 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.51■□□□□ 0.23
IRF1-210ENST00000493208 DDX4Q9NQI0 724 aaKnown RBP16.51■□□□□ 0.23
IRF1-210ENST00000493208 PTPN22Q9Y2R2 807 aa16.51■□□□□ 0.23
IRF1-210ENST00000493208 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.51■□□□□ 0.23
IRF1-210ENST00000493208 DOCK2Q92608 1830 aa16.5■□□□□ 0.23
IRF1-210ENST00000493208 PHF20L1A8MW92 1017 aa16.5■□□□□ 0.23
IRF1-210ENST00000493208 ASNSP08243 561 aa16.5■□□□□ 0.23
IRF1-210ENST00000493208 TTC6Q86TZ1 520 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms