RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 ZNF532Q9HCE3 1301 aa15.48■□□□□ 0.07
CLIP2-209ENST00000493166 IREB2P48200 963 aaKnown RBP15.48■□□□□ 0.07
CLIP2-209ENST00000493166 CERS3Q8IU89 383 aa15.48■□□□□ 0.07
CLIP2-209ENST00000493166 ZSCAN29Q8IWY8 852 aaPredicted RBP15.48■□□□□ 0.07
CLIP2-209ENST00000493166 PI4K2BQ8TCG2 481 aa15.48■□□□□ 0.07
CLIP2-209ENST00000493166 DDX4Q9NQI0 724 aaKnown RBP15.48■□□□□ 0.07
CLIP2-209ENST00000493166 SIPA1L1O43166 1804 aa15.47■□□□□ 0.07
CLIP2-209ENST00000493166 MYH8P13535 1937 aa15.47■□□□□ 0.07
CLIP2-209ENST00000493166 NPM3O75607 178 aaKnown RBP15.47■□□□□ 0.07
CLIP2-209ENST00000493166 NEFLP07196 543 aa15.47■□□□□ 0.07
CLIP2-209ENST00000493166 DYNLL1P63167 89 aaKnown RBP15.47■□□□□ 0.07
CLIP2-209ENST00000493166 MAP3K11Q16584 847 aa15.47■□□□□ 0.07
CLIP2-209ENST00000493166 DDX60LQ5H9U9 1706 aaKnown RBP15.47■□□□□ 0.07
CLIP2-209ENST00000493166 DCAF15Q66K64 600 aa15.47■□□□□ 0.07
CLIP2-209ENST00000493166 ZSCAN25Q6NSZ9 544 aa15.47■□□□□ 0.07
CLIP2-209ENST00000493166 ZFPM1Q8IX07 1006 aa15.47■□□□□ 0.07
CLIP2-209ENST00000493166 CCDC102AQ96A19 550 aa15.47■□□□□ 0.07
CLIP2-209ENST00000493166 COL2A1P02458 1487 aaPredicted RBP15.46■□□□□ 0.07
CLIP2-209ENST00000493166 DOCK1Q14185 1865 aa15.46■□□□□ 0.07
CLIP2-209ENST00000493166 MAGEB6P1A0A0J9YX57 407 aa15.46■□□□□ 0.07
CLIP2-209ENST00000493166 TCRBV5S4A2TA0A5A2 114 aa15.46■□□□□ 0.07
CLIP2-209ENST00000493166 USP2O75604 605 aaPredicted RBP15.46■□□□□ 0.07
CLIP2-209ENST00000493166 ADD2P35612 726 aa15.46■□□□□ 0.07
CLIP2-209ENST00000493166 PDE1AP54750 535 aa15.46■□□□□ 0.07
CLIP2-209ENST00000493166 JMYQ8N9B5 988 aa15.46■□□□□ 0.07
CLIP2-209ENST00000493166 KBTBD3Q8NAB2 608 aa15.46■□□□□ 0.07
CLIP2-209ENST00000493166 CSRNP1Q96S65 589 aa15.46■□□□□ 0.07
CLIP2-209ENST00000493166 OSBPL5Q9H0X9 879 aaPredicted RBP15.46■□□□□ 0.07
CLIP2-209ENST00000493166 STAP2Q9UGK3 403 aa15.46■□□□□ 0.07
CLIP2-209ENST00000493166 AOC2O75106 756 aa15.45■□□□□ 0.06
CLIP2-209ENST00000493166 SLC10A3P09131 477 aa15.45■□□□□ 0.06
CLIP2-209ENST00000493166 LDLRAD1Q5T700 205 aa15.45■□□□□ 0.06
CLIP2-209ENST00000493166 MIGA2Q7L4E1 593 aa15.45■□□□□ 0.06
CLIP2-209ENST00000493166 RASAL3Q86YV0 1011 aa15.45■□□□□ 0.06
CLIP2-209ENST00000493166 ANKRD13AQ8IZ07 590 aa15.45■□□□□ 0.06
CLIP2-209ENST00000493166 TGFBRAP1Q8WUH2 860 aa15.45■□□□□ 0.06
CLIP2-209ENST00000493166 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.45■□□□□ 0.06
CLIP2-209ENST00000493166 ATRNL1Q5VV63 1379 aa15.45■□□□□ 0.06
CLIP2-209ENST00000493166 FLT1P17948 1338 aa15.44■□□□□ 0.06
CLIP2-209ENST00000493166 DDTLA6NHG4 134 aaPredicted RBP15.44■□□□□ 0.06
CLIP2-209ENST00000493166 UNCXA6NJT0 531 aa15.44■□□□□ 0.06
CLIP2-209ENST00000493166 FAM155AB1AL88 458 aaPredicted RBP15.44■□□□□ 0.06
CLIP2-209ENST00000493166 USP5P45974 858 aa15.44■□□□□ 0.06
CLIP2-209ENST00000493166 NOGQ13253 232 aa15.44■□□□□ 0.06
CLIP2-209ENST00000493166 UBE3CQ15386 1083 aa15.44■□□□□ 0.06
CLIP2-209ENST00000493166 LRRFIP1Q32MZ4 808 aaKnown RBP15.44■□□□□ 0.06
CLIP2-209ENST00000493166 SLFNL1Q499Z3 407 aa15.44■□□□□ 0.06
CLIP2-209ENST00000493166 SH3BP5LQ7L8J4 393 aa15.44■□□□□ 0.06
CLIP2-209ENST00000493166 MAPKAPK5Q8IW41 473 aa15.44■□□□□ 0.06
CLIP2-209ENST00000493166 RIOK1Q9BRS2 568 aaKnown RBP15.44■□□□□ 0.06
CLIP2-209ENST00000493166 ZNF341Q9BYN7 854 aa15.44■□□□□ 0.06
CLIP2-209ENST00000493166 CHGBP05060 677 aa15.43■□□□□ 0.06
CLIP2-209ENST00000493166 MAP2K2P36507 400 aa15.43■□□□□ 0.06
CLIP2-209ENST00000493166 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.43■□□□□ 0.06
CLIP2-209ENST00000493166 SLC10A4Q96EP9 437 aa15.43■□□□□ 0.06
CLIP2-209ENST00000493166 CLMNQ96JQ2 1002 aa15.43■□□□□ 0.06
CLIP2-209ENST00000493166 WRNIP1Q96S55 665 aa15.43■□□□□ 0.06
CLIP2-209ENST00000493166 FSD1Q9BTV5 496 aa15.43■□□□□ 0.06
CLIP2-209ENST00000493166 CRNKL1Q9BZJ0 848 aaKnown RBP15.43■□□□□ 0.06
CLIP2-209ENST00000493166 CSADQ9Y600 493 aa15.43■□□□□ 0.06
CLIP2-209ENST00000493166 MBD4O95243 580 aa15.42■□□□□ 0.06
CLIP2-209ENST00000493166 ZFYP08048 801 aaPredicted RBP15.42■□□□□ 0.06
CLIP2-209ENST00000493166 MAP3K9P80192 1104 aa15.42■□□□□ 0.06
CLIP2-209ENST00000493166 PLEKHM2Q8IWE5 1019 aa15.42■□□□□ 0.06
CLIP2-209ENST00000493166 LCORLQ8N3X6 602 aa15.42■□□□□ 0.06
CLIP2-209ENST00000493166 PHIPQ8WWQ0 1821 aa15.41■□□□□ 0.06
CLIP2-209ENST00000493166 RNF113AO15541 343 aaKnown RBP15.41■□□□□ 0.06
CLIP2-209ENST00000493166 MKRN3Q13064 507 aaKnown RBP15.41■□□□□ 0.06
CLIP2-209ENST00000493166 VGLL4Q14135 290 aa15.41■□□□□ 0.06
CLIP2-209ENST00000493166 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.41■□□□□ 0.06
CLIP2-209ENST00000493166 AIDAQ96BJ3 306 aa15.41■□□□□ 0.06
CLIP2-209ENST00000493166 EVI5LQ96CN4 794 aa15.41■□□□□ 0.06
CLIP2-209ENST00000493166 DHX36Q9H2U1 1008 aaKnown RBP15.41■□□□□ 0.06
CLIP2-209ENST00000493166 ARMT1Q9H993 441 aa15.41■□□□□ 0.06
CLIP2-209ENST00000493166 ELP3Q9H9T3 547 aa15.41■□□□□ 0.06
CLIP2-209ENST00000493166 SAP30BPQ9UHR5 308 aaKnown RBP15.41■□□□□ 0.06
CLIP2-209ENST00000493166 TRIM6-TRIM34B2RNG4 842 aa15.4■□□□□ 0.06
CLIP2-209ENST00000493166 HLA-DOAP06340 250 aa15.4■□□□□ 0.06
CLIP2-209ENST00000493166 MAP2K1Q02750 393 aaPredicted RBP15.4■□□□□ 0.06
CLIP2-209ENST00000493166 APPBP2Q92624 585 aa15.4■□□□□ 0.06
CLIP2-209ENST00000493166 ZKSCAN4Q969J2 545 aaPredicted RBP15.4■□□□□ 0.06
CLIP2-209ENST00000493166 WNK4Q96J92 1243 aa15.4■□□□□ 0.06
CLIP2-209ENST00000493166 PUS7LQ9H0K6 701 aaKnown RBP15.4■□□□□ 0.06
CLIP2-209ENST00000493166 OSBPL3Q9H4L5 887 aa15.4■□□□□ 0.06
CLIP2-209ENST00000493166 PI4KBQ9UBF8 816 aa15.4■□□□□ 0.06
CLIP2-209ENST00000493166 PALD1Q9ULE6 856 aa15.4■□□□□ 0.06
CLIP2-209ENST00000493166 PTPRFP10586 1907 aa15.4■□□□□ 0.06
CLIP2-209ENST00000493166 INPP5BP32019 993 aa15.39■□□□□ 0.05
CLIP2-209ENST00000493166 KIF23Q02241 960 aaPredicted RBP15.39■□□□□ 0.05
CLIP2-209ENST00000493166 SLC4A8Q2Y0W8 1093 aa15.39■□□□□ 0.05
CLIP2-209ENST00000493166 SPRYD7Q5W111 196 aa15.39■□□□□ 0.05
CLIP2-209ENST00000493166 SDR42E1Q8WUS8 393 aa15.39■□□□□ 0.05
CLIP2-209ENST00000493166 OPTNQ96CV9 577 aa15.39■□□□□ 0.05
CLIP2-209ENST00000493166 ZIC5Q96T25 663 aa15.39■□□□□ 0.05
CLIP2-209ENST00000493166 TRIM34Q9BYJ4 488 aa15.39■□□□□ 0.05
CLIP2-209ENST00000493166 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.39■□□□□ 0.05
CLIP2-209ENST00000493166 HERC5Q9UII4 1024 aaKnown RBP15.39■□□□□ 0.05
CLIP2-209ENST00000493166 ZNF112Q9UJU3 913 aa15.39■□□□□ 0.05
CLIP2-209ENST00000493166 FAM196BA6NMK8 535 aa15.38■□□□□ 0.05
CLIP2-209ENST00000493166 TBC1D12O60347 775 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms