RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 MYL5Q02045 173 aa17.44■□□□□ 0.38
TNFRSF1B-203ENST00000492361 TTF1Q15361 905 aaPredicted RBP17.44■□□□□ 0.38
TNFRSF1B-203ENST00000492361 SHC4Q6S5L8 630 aa17.44■□□□□ 0.38
TNFRSF1B-203ENST00000492361 FMN2Q9NZ56 1722 aa17.44■□□□□ 0.38
TNFRSF1B-203ENST00000492361 ARHGAP23Q9P227 1491 aa17.44■□□□□ 0.38
TNFRSF1B-203ENST00000492361 CAVIN2O95810 425 aa17.44■□□□□ 0.38
TNFRSF1B-203ENST00000492361 FAM182BQ5T319 152 aa17.44■□□□□ 0.38
TNFRSF1B-203ENST00000492361 DYNLL1P63167 89 aaKnown RBP17.44■□□□□ 0.38
TNFRSF1B-203ENST00000492361 CCDC34Q96HJ3 373 aa17.44■□□□□ 0.38
TNFRSF1B-203ENST00000492361 PCMTD1Q96MG8 357 aaPredicted RBP17.44■□□□□ 0.38
TNFRSF1B-203ENST00000492361 VWA3AA6NCI4 1184 aa17.43■□□□□ 0.38
TNFRSF1B-203ENST00000492361 HOOK1Q9UJC3 728 aaKnown RBP17.43■□□□□ 0.38
TNFRSF1B-203ENST00000492361 YEATS4O95619 227 aa17.43■□□□□ 0.38
TNFRSF1B-203ENST00000492361 SLC39A14Q15043 492 aa17.43■□□□□ 0.38
TNFRSF1B-203ENST00000492361 MAP3K15Q6ZN16 1313 aa17.43■□□□□ 0.38
TNFRSF1B-203ENST00000492361 PRR29P0C7W0 189 aa17.43■□□□□ 0.38
TNFRSF1B-203ENST00000492361 CCZ1BP86790 482 aa17.43■□□□□ 0.38
TNFRSF1B-203ENST00000492361 CCZ1P86791 482 aaPredicted RBP17.43■□□□□ 0.38
TNFRSF1B-203ENST00000492361 KRI1Q8N9T8 703 aaKnown RBP17.43■□□□□ 0.38
TNFRSF1B-203ENST00000492361 PPP1R13BQ96KQ4 1090 aa17.43■□□□□ 0.38
TNFRSF1B-203ENST00000492361 SAMSN1Q9NSI8 373 aaKnown RBP17.43■□□□□ 0.38
TNFRSF1B-203ENST00000492361 A0A0U1RQG5 324 aaPredicted RBP17.42■□□□□ 0.38
TNFRSF1B-203ENST00000492361 CMA1P23946 247 aa17.42■□□□□ 0.38
TNFRSF1B-203ENST00000492361 PUM3Q15397 648 aaKnown RBP17.42■□□□□ 0.38
TNFRSF1B-203ENST00000492361 HINFPQ9BQA5 517 aa17.42■□□□□ 0.38
TNFRSF1B-203ENST00000492361 ISCA1Q9BUE6 129 aa17.42■□□□□ 0.38
TNFRSF1B-203ENST00000492361 PUF60Q9UHX1 559 aaKnown RBP17.42■□□□□ 0.38
TNFRSF1B-203ENST00000492361 FOXP2O15409 715 aa17.42■□□□□ 0.38
TNFRSF1B-203ENST00000492361 PDE8AO60658 829 aa17.42■□□□□ 0.38
TNFRSF1B-203ENST00000492361 PIP4K2BP78356 416 aa17.42■□□□□ 0.38
TNFRSF1B-203ENST00000492361 VAT1LQ9HCJ6 419 aa17.42■□□□□ 0.38
TNFRSF1B-203ENST00000492361 RIPOR2Q9Y4F9 1068 aa17.42■□□□□ 0.38
TNFRSF1B-203ENST00000492361 ZNF335Q9H4Z2 1342 aaPredicted RBP17.42■□□□□ 0.38
TNFRSF1B-203ENST00000492361 SRCAPQ6ZRS2 3230 aa17.42■□□□□ 0.38
TNFRSF1B-203ENST00000492361 LTN1O94822 1766 aa17.42■□□□□ 0.38
TNFRSF1B-203ENST00000492361 SH2B2O14492 632 aaPredicted RBP17.41■□□□□ 0.38
TNFRSF1B-203ENST00000492361 MCM7P33993 719 aa17.41■□□□□ 0.38
TNFRSF1B-203ENST00000492361 SUSD4Q5VX71 490 aa17.41■□□□□ 0.38
TNFRSF1B-203ENST00000492361 STRBPQ96SI9 672 aaKnown RBP17.41■□□□□ 0.38
TNFRSF1B-203ENST00000492361 NEMFO60524 1076 aa17.41■□□□□ 0.38
TNFRSF1B-203ENST00000492361 CIAO1O76071 339 aa17.41■□□□□ 0.38
TNFRSF1B-203ENST00000492361 FBXO38Q6PIJ6 1188 aa17.41■□□□□ 0.38
TNFRSF1B-203ENST00000492361 EPSTI1Q96J88 318 aa17.41■□□□□ 0.38
TNFRSF1B-203ENST00000492361 ALDH8A1Q9H2A2 487 aaPredicted RBP17.41■□□□□ 0.38
TNFRSF1B-203ENST00000492361 POLR3EQ9NVU0 708 aa17.41■□□□□ 0.38
TNFRSF1B-203ENST00000492361 PDE4BQ07343 736 aa17.41■□□□□ 0.38
TNFRSF1B-203ENST00000492361 AKNAD1Q5T1N1 836 aa17.41■□□□□ 0.38
TNFRSF1B-203ENST00000492361 PPFIBP1Q86W92 1011 aa17.41■□□□□ 0.38
TNFRSF1B-203ENST00000492361 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.41■□□□□ 0.38
TNFRSF1B-203ENST00000492361 IRX2Q9BZI1 471 aaPredicted RBP17.41■□□□□ 0.38
TNFRSF1B-203ENST00000492361 GPR108Q9NPR9 543 aa17.41■□□□□ 0.38
TNFRSF1B-203ENST00000492361 SLIT1O75093 1534 aa17.41■□□□□ 0.38
TNFRSF1B-203ENST00000492361 ZMYM6O95789 1325 aa17.41■□□□□ 0.38
TNFRSF1B-203ENST00000492361 NMT2O60551 498 aa17.4■□□□□ 0.38
TNFRSF1B-203ENST00000492361 E4F1Q66K89 784 aaPredicted RBP17.4■□□□□ 0.38
TNFRSF1B-203ENST00000492361 SEC31AO94979 1220 aaKnown RBP17.4■□□□□ 0.38
TNFRSF1B-203ENST00000492361 CCDC12Q8WUD4 166 aaPredicted RBP17.4■□□□□ 0.38
TNFRSF1B-203ENST00000492361 LPIN2Q92539 896 aa17.4■□□□□ 0.38
TNFRSF1B-203ENST00000492361 NLRP5P59047 1200 aa17.4■□□□□ 0.38
TNFRSF1B-203ENST00000492361 IFIT1BQ5T764 474 aaKnown RBP17.4■□□□□ 0.38
TNFRSF1B-203ENST00000492361 CCDC150Q8NCX0 1101 aa17.4■□□□□ 0.38
TNFRSF1B-203ENST00000492361 NFAT5O94916 1531 aa17.4■□□□□ 0.38
TNFRSF1B-203ENST00000492361 UQCRFS1P1P0C7P4 283 aa17.39■□□□□ 0.37
TNFRSF1B-203ENST00000492361 KMT5BQ4FZB7 885 aa17.39■□□□□ 0.37
TNFRSF1B-203ENST00000492361 NBPF11Q86T75 865 aa17.39■□□□□ 0.37
TNFRSF1B-203ENST00000492361 NOSTRINQ8IVI9 506 aa17.39■□□□□ 0.37
TNFRSF1B-203ENST00000492361 AATFQ9NY61 560 aaKnown RBP eCLIP17.39■□□□□ 0.37
TNFRSF1B-203ENST00000492361 GOLGB1Q14789 3259 aaKnown RBP17.39■□□□□ 0.37
TNFRSF1B-203ENST00000492361 CBFA2T2O43439 604 aa17.39■□□□□ 0.37
TNFRSF1B-203ENST00000492361 AXDND1Q5T1B0 1012 aaPredicted RBP17.39■□□□□ 0.37
TNFRSF1B-203ENST00000492361 EPB41L4AQ9HCS5 686 aaPredicted RBP17.39■□□□□ 0.37
TNFRSF1B-203ENST00000492361 UBN2Q6ZU65 1347 aa17.39■□□□□ 0.37
TNFRSF1B-203ENST00000492361 PALLDQ8WX93 1383 aa17.39■□□□□ 0.37
TNFRSF1B-203ENST00000492361 PATL2C9JE40 543 aaKnown RBP17.39■□□□□ 0.37
TNFRSF1B-203ENST00000492361 XBP1P17861 261 aa17.39■□□□□ 0.37
TNFRSF1B-203ENST00000492361 VPS16Q9H269 839 aa17.39■□□□□ 0.37
TNFRSF1B-203ENST00000492361 POSTNQ15063 836 aa17.38■□□□□ 0.37
TNFRSF1B-203ENST00000492361 NOM1Q5C9Z4 860 aaKnown RBP17.38■□□□□ 0.37
TNFRSF1B-203ENST00000492361 CSRNP2Q9H175 543 aa17.38■□□□□ 0.37
TNFRSF1B-203ENST00000492361 MAGEB6P1A0A0J9YX57 407 aa17.38■□□□□ 0.37
TNFRSF1B-203ENST00000492361 CASQ1P31415 396 aa17.38■□□□□ 0.37
TNFRSF1B-203ENST00000492361 EVX2Q03828 476 aa17.38■□□□□ 0.37
TNFRSF1B-203ENST00000492361 KRBA2Q6ZNG9 492 aa17.38■□□□□ 0.37
TNFRSF1B-203ENST00000492361 RBM43Q6ZSC3 357 aaKnown RBP17.38■□□□□ 0.37
TNFRSF1B-203ENST00000492361 ZNF654Q8IZM8 581 aa17.38■□□□□ 0.37
TNFRSF1B-203ENST00000492361 RASGRP4Q8TDF6 673 aa17.38■□□□□ 0.37
TNFRSF1B-203ENST00000492361 NBPF3Q9H094 633 aa17.38■□□□□ 0.37
TNFRSF1B-203ENST00000492361 A0A1W2PQ27 194 aa17.38■□□□□ 0.37
TNFRSF1B-203ENST00000492361 A0A1W2PQ64 194 aa17.38■□□□□ 0.37
TNFRSF1B-203ENST00000492361 A0A1W2PQD8 194 aa17.38■□□□□ 0.37
TNFRSF1B-203ENST00000492361 MTF1Q14872 753 aa17.38■□□□□ 0.37
TNFRSF1B-203ENST00000492361 SMAP1Q8IYB5 467 aaPredicted RBP17.38■□□□□ 0.37
TNFRSF1B-203ENST00000492361 TEX13AQ9BXU3 409 aaPredicted RBP17.38■□□□□ 0.37
TNFRSF1B-203ENST00000492361 LY9Q9HBG7 655 aa17.38■□□□□ 0.37
TNFRSF1B-203ENST00000492361 FAM170AA1A519 330 aa17.37■□□□□ 0.37
TNFRSF1B-203ENST00000492361 PIK3AP1Q6ZUJ8 805 aa17.37■□□□□ 0.37
TNFRSF1B-203ENST00000492361 METTL16Q86W50 562 aaKnown RBP17.37■□□□□ 0.37
TNFRSF1B-203ENST00000492361 FOXP4Q8IVH2 680 aaPredicted RBP17.37■□□□□ 0.37
TNFRSF1B-203ENST00000492361 BAG1Q99933 345 aaPredicted RBP17.37■□□□□ 0.37
TNFRSF1B-203ENST00000492361 CARD10Q9BWT7 1032 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms